For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSADRARTAVPPSHRSIVPNIPGAPWWGAVLIAVSTTALGYAFDAGHKDLTHVFAGFYIVGCIAAVLAVR QSGVFTAVIQPPLILFITVPGAYWLFHSAKIGKFKDLLINCGYPLIERFPLMLGTAGTVLLIGLIRWYIG MAQRTSALATGDDGEPTTAARTPILHSLAEKLSALLGGDSDDPDDVADAAPPAPEAGRRSSRSSRSSTGG RSTTRRTDRTRARRTRPPVEDQPDPGAERPRRRRPTPPPDHDAAEPPRRARRRPRPPGDSDLRATPPRQP RRDPHTRRNPYESYERPAPRTSRFDPYSGYEPPEAPESFDRYERRAGRYEPYEPFEPFEPPRRRGSTGGP NNANPKHHPISQVRYRGAAPRDEGRDQYRDEPRPDRRSRPRAPRRPQAESWEYDA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4354 | - | - | 100% (405) | hypothetical protein MMAR_4354 |
M. marinum M | MMAR_5451 | - | 2e-08 | 26.56% (241) | hypothetical protein MMAR_5451 |
M. marinum M | MMAR_4389 | pra | 8e-06 | 31.53% (111) | proline-rich antigen, Pra |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1141c | - | 1e-109 | 53.66% (410) | hypothetical protein Mb1141c |
M. gilvum PYR-GCK | Mflv_2081 | - | 2e-69 | 41.35% (416) | hypothetical protein Mflv_2081 |
M. tuberculosis H37Rv | Rv1111c | - | 1e-109 | 53.66% (410) | hypothetical protein Rv1111c |
M. leprae Br4923 | MLBr_01937 | - | 3e-91 | 45.23% (409) | putative integral membrane protein |
M. abscessus ATCC 19977 | MAB_1258c | - | 3e-40 | 38.08% (302) | hypothetical protein MAB_1258c |
M. avium 104 | MAV_1231 | - | 1e-106 | 54.55% (396) | hypothetical protein MAV_1231 |
M. smegmatis MC2 155 | MSMEG_5223 | - | 2e-70 | 44.25% (391) | hypothetical protein MSMEG_5223 |
M. thermoresistible (build 8) | TH_1237 | - | 1e-32 | 57.89% (114) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0167 | - | 0.0 | 95.99% (399) | hypothetical protein MUL_0167 |
M. vanbaalenii PYR-1 | Mvan_4626 | - | 2e-78 | 43.93% (412) | hypothetical protein Mvan_4626 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2081|M.gilvum_PYR-GCK -------------------------------MSGQRARPAVAADHRSAHP Mvan_4626|M.vanbaalenii_PYR-1 -------------------------------MSEQRARPAVAPEHSSAHP MMAR_4354|M.marinum_M -------------------------------MSADRARTAVPPSHRSIVP MUL_0167|M.ulcerans_Agy99 -------------------------------MSADRARTAVPPSHRSIVP Mb1141c|M.bovis_AF2122/97 -------------------------------MSAQRARSAVQASHRSIHP Rv1111c|M.tuberculosis_H37Rv -------------------------------MSAQRARSAVQASHRSIHP MAV_1231|M.avium_104 -------------------------------------------------- MLBr_01937|M.leprae_Br4923 MERPNEYMARQRSILNKVFTGFSAYCRYGQHVSKQQARSTVESTYRSILP MSMEG_5223|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1258c|M.abscessus_ATCC_199 -------------------------------------------------- TH_1237|M.thermoresistible__bu ----------------------------------------VPAELRSAHP Mflv_2081|M.gilvum_PYR-GCK NVAGIPWWGAILSAVVASLIGFAFDAGSGGGALTGAFATLYVIGCLIGVL Mvan_4626|M.vanbaalenii_PYR-1 NIAGIPWWGAILTAVIASAIGFAFDAGSGGGQLTAAFAALYVVGCLVAVL MMAR_4354|M.marinum_M NIPGAPWWGAVLIAVSTTALGYAFDAG--HKDLTHVFAGFYIVGCIAAVL MUL_0167|M.ulcerans_Agy99 NIPGAPWWGAVLIAVSTTALGYAFDAG--HKDLTHVFAGFYIVGCIAAVL Mb1141c|M.bovis_AF2122/97 HIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCYIAGCVGAVL Rv1111c|M.tuberculosis_H37Rv HIPGVPWWAAILIAVTATAIGYAIDAGSGHKALTLVFTGCYIAGCVGAVL MAV_1231|M.avium_104 ----------MLVAVTATAIGYGIDAG--HKELTHVFAGFYIAGCVAAVL MLBr_01937|M.leprae_Br4923 NIPGVPWWAALLIATTASAIGYAIDAG--NTDLTTVFTGFYITGCVAAVL MSMEG_5223|M.smegmatis_MC2_155 ----MPWWGAVLAAVTATAIGFAFDAGAGSRELSGVFGFCYVVGCLAAVL MAB_1258c|M.abscessus_ATCC_199 ----MPWWGAILIAVAGTLFGFALDAMINGEKLTGAFAGCYAAGCVVAVL TH_1237|M.thermoresistible__bu DIPGVPWWGAALIALTATALGFAFDAGSGSKELSVVFSGTYMLGCLVAVL * * : :*:.:** *: .* * **: .** Mflv_2081|M.gilvum_PYR-GCK AVQQSALFTAVIQPPLVLFVTVPAAYFLMHSSEIQGVKDILINCGYPLIQ Mvan_4626|M.vanbaalenii_PYR-1 AVQQSNLFTAVIQPPLVLFVTVPAAYFLMHSSDIQGLKDILINCGYPLIE MMAR_4354|M.marinum_M AVRQSGVFTAVIQPPLILFITVPGAYWLFHSAKIGKFKDLLINCGYPLIE MUL_0167|M.ulcerans_Agy99 AVRQSGVFTAVIQPPLILFITVPGAYWLFHSAKIGKFKDLLINCGYPLIE Mb1141c|M.bovis_AF2122/97 AVRQSDLFTALVQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIE Rv1111c|M.tuberculosis_H37Rv AVRQSDLFTALVQPPLILFCAVPGAYWLFHGGTIGKFKDLLINCGYSLIE MAV_1231|M.avium_104 AVRQDGIFTTIIQPPLILFCAVPGAYWLFHDAKVGRLKDLLINCGYPLIE MLBr_01937|M.leprae_Br4923 AVRQSGLFTAVIQPPLILFCAVPAAYWLFHGSKIKSLKDLLINCGYPLIE MSMEG_5223|M.smegmatis_MC2_155 AVRQSGVFTAVIQPPLILFFAVPGSYFLFHGGEINGLKDLAINCGYPLIE MAB_1258c|M.abscessus_ATCC_199 AVRYASIFTAVVQPPLILFASIPMAYLIMSQAPLAGGKSTAITIGYPLIE TH_1237|M.thermoresistible__bu AVRPG-------RPPIVLFAAVPSAYFLFHGGQIRGLKDLAINCGYPLIE **: :**::** ::* :* :: . : *. *. **.**: Mflv_2081|M.gilvum_PYR-GCK RFPLMFF------------------------------------------- Mvan_4626|M.vanbaalenii_PYR-1 RFPLMFF------------------------------------------- MMAR_4354|M.marinum_M RFPLMLG------------------------------------------- MUL_0167|M.ulcerans_Agy99 RFPLMLG------------------------------------------- Mb1141c|M.bovis_AF2122/97 RFPLMLG------------------------------------------- Rv1111c|M.tuberculosis_H37Rv RFPLMLG------------------------------------------- MAV_1231|M.avium_104 RFPLMLG------------------------------------------- MLBr_01937|M.leprae_Br4923 RFPLMLG------------------------------------------- MSMEG_5223|M.smegmatis_MC2_155 RFPLMLF------------------------------------------- MAB_1258c|M.abscessus_ATCC_199 RFPLMIS------------------------------------------- TH_1237|M.thermoresistible__bu RFPVXXXPFYTATAANPEGMRRRRQFHSRGRQLTGFTDEILGRPDAGEDL ***: Mflv_2081|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4626|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_4354|M.marinum_M -------------------------------------------------- MUL_0167|M.ulcerans_Agy99 -------------------------------------------------- Mb1141c|M.bovis_AF2122/97 -------------------------------------------------- Rv1111c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1231|M.avium_104 -------------------------------------------------- MLBr_01937|M.leprae_Br4923 -------------------------------------------------- MSMEG_5223|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1258c|M.abscessus_ATCC_199 -------------------------------------------------- TH_1237|M.thermoresistible__bu TGDPDAALLAAINAPRGPGMRDIVATIQAEQDAVIRLDHPGVLVIEGGPG Mflv_2081|M.gilvum_PYR-GCK ----------------------TSAAVLLIGLARWYFAKS---------- Mvan_4626|M.vanbaalenii_PYR-1 ----------------------TSAAVLMIGLARWYFAKSGHQF------ MMAR_4354|M.marinum_M ----------------------TAGTVLLIGLIRWYIGMAQRTS------ MUL_0167|M.ulcerans_Agy99 ----------------------TAGTVLLIGLIRWYIGMAQRTS------ Mb1141c|M.bovis_AF2122/97 ----------------------TAAGVLLIGLVRWYLG------------ Rv1111c|M.tuberculosis_H37Rv ----------------------TAAGVLLIGLVRWYLG------------ MAV_1231|M.avium_104 ----------------------TAGAVLAIGLVRWYFGHGQRST------ MLBr_01937|M.leprae_Br4923 ----------------------TAGSVLLIGLVRWFFQLMYRTT------ MSMEG_5223|M.smegmatis_MC2_155 ----------------------TSAAVLLIGLGRWYVGLTSRDTG----- MAB_1258c|M.abscessus_ATCC_199 ----------------------TALGVLIIGVVRWYWG------------ TH_1237|M.thermoresistible__bu TGKTAVALHRVAYLLYTRRSQLSGSGVLVVGPNPTFLDHIGRVLPNLGES :. ** :* : Mflv_2081|M.gilvum_PYR-GCK --------------------------------------HPAGESQPAGVG Mvan_4626|M.vanbaalenii_PYR-1 ------------------------------------GAQARGKGAPAGAG MMAR_4354|M.marinum_M ------------------------------------ALATGDDGEP-TTA MUL_0167|M.ulcerans_Agy99 ------------------------------------ALATGDDGEP-TTA Mb1141c|M.bovis_AF2122/97 -------------------------------------------------- Rv1111c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1231|M.avium_104 ------------------------------------TAAGSDDAAAGPSV MLBr_01937|M.leprae_Br4923 ------------------------------------ASSNSEDD---TVS MSMEG_5223|M.smegmatis_MC2_155 ----------------------------------DTESATPSTRKRASDE MAB_1258c|M.abscessus_ATCC_199 -------------------------------------------------- TH_1237|M.thermoresistible__bu DVVFMTPGDLVPGLRVTAQDSDDAARVKGSLEILDVLRAAVADRQRLPEE Mflv_2081|M.gilvum_PYR-GCK GVAAKLAGLVGGLRRPGGARADGAKTRPRRQADRRRPRDAKPTARRSAHS Mvan_4626|M.vanbaalenii_PYR-1 -LSAKLSSLLGGSATAVDGDAVADEP-PRRRATDRRRAAPKPAARKSSRG MMAR_4354|M.marinum_M ARTPILHSLAEKLSALLGGDSDDPDDVADAAPPAPEAGRRSSRSSRSSTG MUL_0167|M.ulcerans_Agy99 ARTPILHSLAEKLSALLGGDSDDPDDVADAAPPAPEAGRRSSRSGRSSTG Mb1141c|M.bovis_AF2122/97 --TALFDSIARKLSSLMTGDSDD-------------------------DG Rv1111c|M.tuberculosis_H37Rv --TALFDSIARKLSSLMTGDSDD-------------------------DG MAV_1231|M.avium_104 DIQSLVGGLVAKVRAALHPDSDGDTTEESAQRRRTRRSGSSSRTRRTARS MLBr_01937|M.leprae_Br4923 KPNSLISGITAVLNSILCIYSNDQNHRANQDTADTELMHSDPPLR---TR MSMEG_5223|M.smegmatis_MC2_155 APNAVVASITSKLSSLLFRKPATDRSASRQRARQSTRRDRAERAGTGAAP MAB_1258c|M.abscessus_ATCC_199 ----IFSGRPARDKTAKPAKPKATKS--------AKPRTTRTRVQTLVDA TH_1237|M.thermoresistible__bu PLPIELSDVTVRIDAETAQWARQEARDSGLPHNEARAVFADVVTWVLTER . . . Mflv_2081|M.gilvum_PYR-GCK GAPSTRGAPSRRHSRAPETEIIDPVVDEQPRRRR---------------- Mvan_4626|M.vanbaalenii_PYR-1 DRPVKRSAPRARQAPAPETEIIDPVAD-RPRRRR---------------- MMAR_4354|M.marinum_M GRSTTRRTDRTRARRTRPPVEDQPDPG--AERPR---------RRRPTPP MUL_0167|M.ulcerans_Agy99 GRSTTRRTDRTRARRTRPPVEDQPDPG--AERPR---------RRRPTPP Mb1141c|M.bovis_AF2122/97 GRRSAQRPARTRSRHARPPSEDNREPI--AER------------------ Rv1111c|M.tuberculosis_H37Rv GRRSAQRPARTRSRHARPPSEDNREPI--AER------------------ MAV_1231|M.avium_104 TRSSAS-SSRTRSRHARPPLDDAAEPAERPERPRRAARRSAAARNYDTAG MLBr_01937|M.leprae_Br4923 QTARDNRSARTHSGQARRVVEYTSEPLVEPWQHS--------SQRSSEQA MSMEG_5223|M.smegmatis_MC2_155 RKRTGERPPRRRPAAAAAADAKEPTRNGRPTKRTAP------PRARRPRD MAB_1258c|M.abscessus_ATCC_199 ETDATAKTGGTAVRSRRPRVEEAAARTRHGRHES---------------- TH_1237|M.thermoresistible__bu AIARIGRGWLTRDDRAAWEELRADLLDELANNADYAAALDQLWPILTPQQ . Mflv_2081|M.gilvum_PYR-GCK PRPDGQ--SPEPRRR----PRPSSSREPREPRRSRESREDRESRG--APS Mvan_4626|M.vanbaalenii_PYR-1 PRPEEQPPTPEPRRR----PRTSSAREPRNAR-----------------S MMAR_4354|M.marinum_M PDHDAAEPPRRARRR----PRPPGDSDLRATPPRQPRRDPHTRRNPYESY MUL_0167|M.ulcerans_Agy99 PDNDAAEPPRWARRR----PRPPGDSDLRATPPRQPRRDPHTRRNPYESY Mb1141c|M.bovis_AF2122/97 ----------RSRRR----PRP--------------QNDPHPRRN---AH Rv1111c|M.tuberculosis_H37Rv ----------RSRRR----PRP--------------QNDPHPRRN---AH MAV_1231|M.avium_104 RNYDAAEPPRRTRRR----PRPDADPELRGQPPREPRREPRPRRS---PY MLBr_01937|M.leprae_Br4923 RDFDAGESPRRSRRQ----PTPQSDPELRSQPPREIRRDAYGHRS--GPY MSMEG_5223|M.smegmatis_MC2_155 PELDPTLDAPERPRR----PRS-----ARTEPPVVPPAEPRRRVRTQPRE MAB_1258c|M.abscessus_ATCC_199 ----------PTRRR----PTRDSEPVSRRASSIGTPWEDERPMR---TE TH_1237|M.thermoresistible__bu LLADLYTSPERLRAVGADPALYRADGEAWTVSDVPLLDELIDLLGPDKPA . Mflv_2081|M.gilvum_PYR-GCK REPRERRVRRDRYDPYDRGD---TYDRGDAYERPRPQRE------RPQRP Mvan_4626|M.vanbaalenii_PYR-1 RDPLPPRERRSPYDGDDRHD---HRPQRDRGPREQPRR-------RSRFD MMAR_4354|M.marinum_M ERPAPRTSRFDPYSGYEPPE---APESFDRYERRAGR---YEPYEPFEP- MUL_0167|M.ulcerans_Agy99 ERPAPRTSRFDPYSGYEPPE---AAESFDRYERRAGRYEPYEPYEPFEP- Mb1141c|M.bovis_AF2122/97 ERPAPRSSRFDSYRSYQPSEPSGPAEPVNRYERRGAR---YQPYARYEPT Rv1111c|M.tuberculosis_H37Rv ERPAPRSSRFDSYRSYQPSEPSGPAEPVNRYERRGAR---YQPYARYEPT MAV_1231|M.avium_104 ERPVPRSSRFD---GYDPPS---GPENLGRYDT-------------PEPP MLBr_01937|M.leprae_Br4923 EWPTNHSSHLEPYRRYKQPG---PPEHFTEHGQLYER------------- MSMEG_5223|M.smegmatis_MC2_155 PREPRKQPPGDRLGPYERPQ---RRRRFDDYRPFEDP---------FDAP MAB_1258c|M.abscessus_ATCC_199 RRPARRLRDEYDYDDYGYDE------------------------------ TH_1237|M.thermoresistible__bu DDTAERERQKQAEYAAEVLESLVRREDLMDDEDRLLPTDMLFGEDLAERF Mflv_2081|M.gilvum_PYR-GCK RYDDYEPYGSDGP------------SSHHPVSRVRYRG-EESGE------ Mvan_4626|M.vanbaalenii_PYR-1 DHEPFDPYSSAGT------------SSHHPISRVRYRGADDVDD------ MMAR_4354|M.marinum_M FEPPRRRGSTGGPNN--------ANPKHHPISQVRYRGAAPRDEGRDQYR MUL_0167|M.ulcerans_Agy99 FEPPRWRGSTGGPNN--------ANPKHHPISQVRYRGAAPRDEGRDQYR Mb1141c|M.bovis_AF2122/97 YEPQRRRARPSEP----------TNPTHHPISQVRYRGSATRDARRDNYR Rv1111c|M.tuberculosis_H37Rv YEPQRRRARPSEP----------TNPTHHPISQVRYRGSATRDARRDNYR MAV_1231|M.avium_104 YEPRRRRPASTGA-----------NGTHHPISQVRYRGAAAPGQPREPHT MLBr_01937|M.leprae_Br4923 YKQPRRRATPPRA------------SSVNPISQVRYRGSTARDDPR---- MSMEG_5223|M.smegmatis_MC2_155 MEPPFEPRTNGHP----------GRSTHHPVSRVRYRGGEDE-------- MAB_1258c|M.abscessus_ATCC_199 -RPRYREPRAEAP-----------REPHRPA--VRYRD------------ TH_1237|M.thermoresistible__bu AERDHRDLAERAAADRDWVYGHIVVDEAQELSEMDWRALMRRCPSRSFTV . . : :* Mflv_2081|M.gilvum_PYR-GCK ---RAEYRSRR------REPR--DADRWEYDI------------------ Mvan_4626|M.vanbaalenii_PYR-1 ---RAEHRSRR------HSPRDADADRWEFDI------------------ MMAR_4354|M.marinum_M DEPRPDRRSRP------RAPRRPQAESWEYDA------------------ MUL_0167|M.ulcerans_Agy99 DEPRPSPRTAP------APGRIPGVRRLTP-------------------- Mb1141c|M.bovis_AF2122/97 EEQRFDRRDRS------RAPRRPPAESWEYDV------------------ Rv1111c|M.tuberculosis_H37Rv EEQRFDRRDRS------RAPRRPPAESWEYDV------------------ MAV_1231|M.avium_104 -ERRTRSRTPG------RTQGRPPAESWEYDA------------------ MLBr_01937|M.leprae_Br4923 -----VDRQRS------QTPRRPVTESWEFDV------------------ MSMEG_5223|M.smegmatis_MC2_155 -----DHRSEY------RTRPRPPARGRHSRD------------------ MAB_1258c|M.abscessus_ATCC_199 -----ERPPVP------PRRRQDRYDAWDYDR------------------ TH_1237|M.thermoresistible__bu VGDLSQRRSAAGTTSWDSMFERYVPGRWVYRTLTVNYRTPAEIMAVAAAL Mflv_2081|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4626|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_4354|M.marinum_M -------------------------------------------------- MUL_0167|M.ulcerans_Agy99 -------------------------------------------------- Mb1141c|M.bovis_AF2122/97 -------------------------------------------------- Rv1111c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1231|M.avium_104 -------------------------------------------------- MLBr_01937|M.leprae_Br4923 -------------------------------------------------- MSMEG_5223|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1258c|M.abscessus_ATCC_199 -------------------------------------------------- TH_1237|M.thermoresistible__bu LAEFAPGVAPPESVRASGVPPWSRRVTADELPAAVEEFVRAEADRPGTSV Mflv_2081|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4626|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_4354|M.marinum_M -------------------------------------------------- MUL_0167|M.ulcerans_Agy99 -------------------------------------------------- Mb1141c|M.bovis_AF2122/97 -------------------------------------------------- Rv1111c|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1231|M.avium_104 -------------------------------------------------- MLBr_01937|M.leprae_Br4923 -------------------------------------------------- MSMEG_5223|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1258c|M.abscessus_ATCC_199 -------------------------------------------------- TH_1237|M.thermoresistible__bu VIGPPDVPGAVAPSQTKGLEFDAVLVVEPERILADGPRGAAELYVALTRA Mflv_2081|M.gilvum_PYR-GCK -------------------------------- Mvan_4626|M.vanbaalenii_PYR-1 -------------------------------- MMAR_4354|M.marinum_M -------------------------------- MUL_0167|M.ulcerans_Agy99 -------------------------------- Mb1141c|M.bovis_AF2122/97 -------------------------------- Rv1111c|M.tuberculosis_H37Rv -------------------------------- MAV_1231|M.avium_104 -------------------------------- MLBr_01937|M.leprae_Br4923 -------------------------------- MSMEG_5223|M.smegmatis_MC2_155 -------------------------------- MAB_1258c|M.abscessus_ATCC_199 -------------------------------- TH_1237|M.thermoresistible__bu TQRLGVLHIDPLPSALSGLTPLEDPAGTPAPA