For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_4323 (-)

annotation: transposase
coordinates: 5326176 - 5327018
length: 280

PEIRSYDSAHLYCGIVWGAEVHDVGAVDDVGRIVLRKRVQSDPAGLTHLLTLLARAGDSPHHPIPLAAEV
DRRLWVRALRSAGRPIYSIDALASARYHTSHAVSAAKSANSGPVLLANIVRTNQAALRPLPPYTGPPDAL
GALARDLQNAVWLRQQLENRIVDLLMDFYPAAIAAFADPLQGGLVRRDARMLLSVAPNPNRAAALTTSRL
RQLLRNAGRQRHVDRDAERLRQVFTATYPQQPTHAETAMGIRLAGQLAQLEAACITVDRLIEQATAQFG*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_4323--100% (280)transposase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2036-6e-0827.91% (215) transposase
M. gilvum PYR-GCKMflv_1197-7e-3335.50% (262) transposase, IS111A/IS1328/IS1533
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. avium 104MAV_0496-2e-7360.16% (246) transposase IS116/IS110/IS902
M. smegmatis MC2 155MSMEG_4081-2e-3433.72% (261) transposase IS116/IS110/IS902
M. thermoresistible (build 8)TH_2233-1e-2931.75% (252) Transposase IS116/IS110/IS902 family protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5958-5e-3131.56% (263) transposase, IS111A/IS1328/IS1533

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_4323|M.marinum_M               MPEIRSYDSAHLYCGIVWGAEVHDVGAVDDVGRIVLRKRVQSDPAGLTHL
MAV_0496|M.avium_104                ---------------------------------MVARGRVSNDAAGFAAL
Mflv_1197|M.gilvum_PYR-GCK          ---------MTLFIGDDWAEDHHDIHLMDAEGTRLASRRLPEGLAGIRGF
TH_2233|M.thermoresistible__bu      ---------------------------MDAEGAKLASRRLPEGLAGIGGF
MSMEG_4081|M.smegmatis_MC2_155      ----------MLFVGDDWAEDHHDLYLMNEAGDRLASRRLPEGLAGIRLL
Mvan_5958|M.vanbaalenii_PYR-1       ----------MIFVGDDWAEDHHDVYLMDESGQRLAARRLPEGLSGIRAL
Mb2036|M.bovis_AF2122/97            ------------------------MSIVDARGREVRRATIEHNAAGLREL
                                                                      :    :  . :*:  :

MMAR_4323|M.marinum_M               LTLLARAGDSPHHPIPLAAEVDRRLWVRALRSAGRPIYSIDALASARYHT
MAV_0496|M.avium_104                LTLLAEAGDSAAHPIPVGIETDRGLWVAALRETGRVIYPINPLAASRYRA
Mflv_1197|M.gilvum_PYR-GCK          HELVAAHAQDPTE-VVIGIETDRGLWVEALAAAGYEVFAVNPLAVARYRD
TH_2233|M.thermoresistible__bu      HDLVAAHAEEPAQ-VVIGIETDRGLWVEALAAAGYQVFAINPLAVARYRD
MSMEG_4081|M.smegmatis_MC2_155      HDLIAAHADDPAQ-VAVGIETDRGLWVEALTGAGYQVYAVNPLAVARYRD
Mvan_5958|M.vanbaalenii_PYR-1       HELIAGYAEEPDQ-VIVGIETDRGLWVSALAAAGYRVWAINPMAAARYRD
Mb2036|M.bovis_AF2122/97            LELLSRAG-----AREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRG
                                      *::  .        :. *      * :*  :*  :  :..    . : 

MMAR_4323|M.marinum_M               SHAVSAAKSANSGPVLLANIVRTNQAALRPLPPYTGPPDALGALARDLQN
MAV_0496|M.avium_104                RHAVSGAKSDATDAVLLANIVRTDAAAHRPLPADTELAQAIRVLARAQQD
Mflv_1197|M.gilvum_PYR-GCK          RHQVSGAKSDAADAKLLADLVRTDRHNHRPIAGDTPEVEAIKVLARAHQN
TH_2233|M.thermoresistible__bu      RHQVSGAKSDAGDAKVLADLVRTDRHNHRPIAGDTPQVEAIKVLARAHQS
MSMEG_4081|M.smegmatis_MC2_155      RHAVSGAKSDAADAKLLADLVRTDRHNHRLIAGDTPDAEAVKVLARAHQN
Mvan_5958|M.vanbaalenii_PYR-1       RHHVSGAKSDASDAKLLADLVRTDRHNHREIAGDRPQAEAIKVLARSHQS
Mb2036|M.bovis_AF2122/97            RYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKD
                                     :  :. *.   .. :**: :**:    * :        ::   .*  :.

MMAR_4323|M.marinum_M               AVWLRQQLENRIVDLLMDFYPAAIAAFADPLQGGLVRRDARMLLSVAPNP
MAV_0496|M.avium_104                AVWARQQIGNQIRDLLKDFYPAAIAAFAGLPEGGLARADARTILAAAPTP
Mflv_1197|M.gilvum_PYR-GCK          LIWSRNRNTNALRSALREYYPAALEAFAS-----LSDRDALAILGRAPTP
TH_2233|M.thermoresistible__bu      LIWARTRHTNTLRSALREYYPAALEAFDD-----LADRDALAILGRAPTP
MSMEG_4081|M.smegmatis_MC2_155      LIWTRNRHTNALRSALREYYPAALEAFDD-----LSDRDALAILGHAPDP
Mvan_5958|M.vanbaalenii_PYR-1       LIWARTRHANMLRSGLREYYPAALEAFDS-----LTDSDALAILGRAPTP
Mb2036|M.bovis_AF2122/97            LVAHRVALANQLRAHLRVVFPGVVGLFADLDS--PISLAFLTFLPRFDCQ
                                     :  *    * :   *   :*..:  * .             :*      

MMAR_4323|M.marinum_M               NRAAALTTSRLRQLLRNAGRQRHVDRDAERLRQVFTATYPQQPTHAETAM
MAV_0496|M.avium_104                TQAATLTPARLRRLLTKAGRRRHLDRDIERLRAVFTDTYLHQPPAVENAM
Mflv_1197|M.gilvum_PYR-GCK          TDAARLSVSKIRSALKAAGRQRNLDAKALEIQTALRSDQLAAAPAVTAAF
TH_2233|M.thermoresistible__bu      TDATGLSLPKIRSALKTAGRQRNLDARALQIQTALRTEQLTAPASVTAAF
MSMEG_4081|M.smegmatis_MC2_155      RQASSLSLAKIRSALKAAGRQRNIDIRAQEIQAALRSEQLAAPAAVTAAF
Mvan_5958|M.vanbaalenii_PYR-1       DQGARLSLAKIGSALKSAGRQRNIESRAAEIQTALRGEHLTAPPAVAAAF
Mb2036|M.bovis_AF2122/97            DRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR-------------
                                      .  *:  ::   *  **   .      .                    

MMAR_4323|M.marinum_M               GIRLAGQLAQLEAACITVDRLIEQATAQFG--------------------
MAV_0496|M.avium_104                GIQLAALLRQLEAACTAADELAEAAIAHFEQHPDAKIITSFPGLGMLAGA
Mflv_1197|M.gilvum_PYR-GCK          GATTRAAVAIITELNHHIADLEAELAAHFETHPDADIYLSLPGLGVILGA
TH_2233|M.thermoresistible__bu      GATTRATVGIITELNRQIDNLDAELTSHFEMHPDADIYRSLPGLGVILGA
MSMEG_4081|M.smegmatis_MC2_155      AATTRATVGLVVELSRQIDDLENELAAHFETHPDADIYRSLPGLGVILGA
Mvan_5958|M.vanbaalenii_PYR-1       GATTAAAVHVITALNDQIAELETALADHFEAHPDADIYRFLPGLGVILGA
Mb2036|M.bovis_AF2122/97            --------------------------------------------------
                                                                                      

MMAR_4323|M.marinum_M               --------------------------------------------------
MAV_0496|M.avium_104                RVLAEIGDDRTRFADARGLKAFAGSAPITRASGKKTVVLHRHIKNRRLAA
Mflv_1197|M.gilvum_PYR-GCK          RVLGEFGDDPNRYTTAKSRKNYAGTSPLTIASGKKRAVLARHVRNRRLYD
TH_2233|M.thermoresistible__bu      RVLGEFGDDPNRYTSAKSRKNYAGTSPLTIASGKKRAVLARHVRNRRLYD
MSMEG_4081|M.smegmatis_MC2_155      RVLGEFGDDPNRYTNAKCRKNYAGTSPLTIASGRKRAVLARHIRNRRLYD
Mvan_5958|M.vanbaalenii_PYR-1       RVLGEFGDDPNRYTTAKCRKNYAGTSPLTIASGRKRAVLARHVRNKRLYD
Mb2036|M.bovis_AF2122/97            --------------------------------------------------
                                                                                      

MMAR_4323|M.marinum_M               --------------------------------------------------
MAV_0496|M.avium_104                VGPIWALGSLRASPGARRHYDARRAAGDWNHQAQRHLFNKFLGQLHHCLQ
Mflv_1197|M.gilvum_PYR-GCK          AIDQWAFCALTNSPGARTFYDQHRAAGDLHHQALRALGNRLVGILHGCLR
TH_2233|M.thermoresistible__bu      AIDQWAFCALTNSPGARAFYDQRRAADDLHHQALRALGNRLVGILHGCLR
MSMEG_4081|M.smegmatis_MC2_155      AIDQWAFCALTRSPGARQFYDHRRAEGDLHHQALRALGNRLVGILHGCLR
Mvan_5958|M.vanbaalenii_PYR-1       ALDQWAFCTLTRSPGARAYYDQHRAAGDTHHQALRALANRLVGILHGCLR
Mb2036|M.bovis_AF2122/97            --------------------------------------------------
                                                                                      

MMAR_4323|M.marinum_M               -------------------------------------
MAV_0496|M.avium_104                TGRLYNEHLAFPLNRPGFDGGSCYWISTSGWSVRFVA
Mflv_1197|M.gilvum_PYR-GCK          HHTPYSEHKAWAHRQT--DSRAA--------------
TH_2233|M.thermoresistible__bu      HHTRYDEHTAWAHRQTTADTQAA--------------
MSMEG_4081|M.smegmatis_MC2_155      HRTRYDEHKAWAHRTP----AAA--------------
Mvan_5958|M.vanbaalenii_PYR-1       HHSPYDEHKAWAHRKP----AAA--------------
Mb2036|M.bovis_AF2122/97            -------------------------------------