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KNVRKTLIVAAITGTLVTVPTAATANADDGLDPNAVGADTTGFDPNLPAAPGAFEPPAPQDAPPAPELAD ADPDLPPPAPDAMIAPVDMPEAPAPEEAPPAPQDAPPAPEAMIAPVDMPDGPAPEDAPPAPDAFAPPAPE DVPPAPEPVAFEPPAPDVAPPPAPKVYTVNWDAIAQCESGGNWGINTGNGYSGGLQFTASTWRANGGAGS AAGASREEQIRVAENVLRSQGIGAWPVCGRRG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3776 | rpfE | - | 100% (243) | resuscitation-promoting factor RpfE |
| M. marinum M | MMAR_4665 | rpfA | 3e-28 | 51.72% (145) | resuscitation-promoting factor RpfA |
| M. marinum M | MMAR_4479 | rpfB | 3e-22 | 43.04% (158) | resuscitation-promoting factor RpfB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2477c | rpfE | 2e-57 | 53.06% (245) | resuscitation-promoting factor RpfE |
| M. gilvum PYR-GCK | Mflv_2619 | - | 3e-31 | 77.03% (74) | transglycosylase domain-containing protein |
| M. tuberculosis H37Rv | Rv2450c | rpfE | 6e-57 | 52.65% (245) | resuscitation-promoting factor RpfE |
| M. leprae Br4923 | MLBr_02030 | - | 8e-24 | 64.29% (70) | hypothetical protein MLBr_02030 |
| M. abscessus ATCC 19977 | MAB_1597 | - | 2e-33 | 85.14% (74) | hypothetical protein MAB_1597 |
| M. avium 104 | MAV_1722 | - | 3e-60 | 73.86% (153) | secreted protein |
| M. smegmatis MC2 155 | MSMEG_4643 | - | 5e-32 | 78.67% (75) | resuscitation-promoting factor |
| M. thermoresistible (build 8) | TH_0357 | - | 2e-32 | 80.00% (75) | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFE |
| M. ulcerans Agy99 | MUL_3723 | rpfE | 1e-114 | 83.13% (243) | resuscitation-promoting factor RpfE |
| M. vanbaalenii PYR-1 | Mvan_3962 | - | 3e-31 | 76.00% (75) | transglycosylase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3776|M.marinum_M MKNVRKTLIVAAITGTLVTVPTAATANADDGLDPNAVGADTTGFDPNLPA
MUL_3723|M.ulcerans_Agy99 MKNVRKTLIVAAITETFVTVPTAATANADDGLDPNAVGADTTGFDPNLPA
MAV_1722|M.avium_104 -----------------------------------------MGFDPNVPA
Mb2477c|M.bovis_AF2122/97 MKNARTTLIAAAIAGTLVTTSPAGIANADD-----------AGLDPNAAA
Rv2450c|M.tuberculosis_H37Rv MKNARTTLIAAAIAGTLVTTSPAGIANADD-----------AGLDPNAAA
Mflv_2619|M.gilvum_PYR-GCK MSGARTADQSPVLPGPGPGEVLSGLP--------------CCARPRRHDP
Mvan_3962|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_4643|M.smegmatis_MC2_155 --------------------------------------------------
TH_0357|M.thermoresistible__bu --------------------------------------------------
MAB_1597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02030|M.leprae_Br4923 --------------------------------------------------
MMAR_3776|M.marinum_M APGAFEPPAPQDAPPAPELADADPDLPPPAPDAMIAPVDMPEAPAPEEAP
MUL_3723|M.ulcerans_Agy99 APGAFEPPAPQDAPPAPELADADPDLPPPAPDAMIA--------------
MAV_1722|M.avium_104 AG-----PAP-DAP------------PPPAP-------------------
Mb2477c|M.bovis_AF2122/97 GP-----DAVGFDPN-----------LPPAP-------------------
Rv2450c|M.tuberculosis_H37Rv GP-----DAVGFDPN-----------LPPAP-------------------
Mflv_2619|M.gilvum_PYR-GCK TPACYRHHARVTLPC-----------LAGADG------------------
Mvan_3962|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_4643|M.smegmatis_MC2_155 --------------------------------------------------
TH_0357|M.thermoresistible__bu --------------------------------------------------
MAB_1597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_02030|M.leprae_Br4923 --------------------------------------------------
MMAR_3776|M.marinum_M PAPQDAPPAPEAMIAPVDMPDGPAPEDAPPAPDAFAPPAPEDVPPAPEPV
MUL_3723|M.ulcerans_Agy99 ---------------PVDMPDGPAPEDAPPAPDAFAPPAPEDVPPAPEPV
MAV_1722|M.avium_104 -----------------DAPPAPAP-DAPPAPDAPPPPAP-DAPPPPAPD
Mb2477c|M.bovis_AF2122/97 ---------------------DAAPVDTPPAPEDAG-FDP-NLPPPLAPD
Rv2450c|M.tuberculosis_H37Rv ---------------------DAAPVDTPPAPEDAG-FDP-NLPPPLAPD
Mflv_2619|M.gilvum_PYR-GCK -------------------ARSAKGQKLKNIRNTFG-LATIAGALAVAPL
Mvan_3962|M.vanbaalenii_PYR-1 ---------------------------MKNIRKTFG-LATIAGALAVAPM
MSMEG_4643|M.smegmatis_MC2_155 ---------------------------MKNIRKTFG-LGIVAGALAVAPV
TH_0357|M.thermoresistible__bu ---------------------------LKHIRKTLG-LATFAGALAVAPI
MAB_1597|M.abscessus_ATCC_1997 ------------------------MKYVRKTLTTRAVLWAMAPALVAAPM
MLBr_02030|M.leprae_Br4923 ---------------------MDMPGEMLDVRKLCKLFVKSAVVSGIVTA
.
MMAR_3776|M.marinum_M AFEPPAPDVAPPPAPKVYTVNWDAIAQCESGGNWGINTGNGYSGGLQFTA
MUL_3723|M.ulcerans_Agy99 AFEPPAPDVAPPPAPKVYTVNWDAIAQCEPGGNWGINTGNGYSGGLQFTA
MAV_1722|M.avium_104 APPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQFTS
Mb2477c|M.bovis_AF2122/97 FLSPPAEEA--PPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTA
Rv2450c|M.tuberculosis_H37Rv FLSPPAEEA--PPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLRFTA
Mflv_2619|M.gilvum_PYR-GCK AL---------AGTANADGVNWDAVAACESGGNWSINTGNGYYGGLQFTM
Mvan_3962|M.vanbaalenii_PYR-1 AVVTG----VAAGTANADSVNWDAVAACESGGNWSINTGNGYYGGLQFTM
MSMEG_4643|M.smegmatis_MC2_155 ALG--------AGTANADSVNWDAIASCESGGNWSINTGNGYYGGLQFNL
TH_0357|M.thermoresistible__bu AL---------AGTASADSVNWDAIAACESGGNWSINTGNGYYGGLQFSL
MAB_1597|M.abscessus_ATCC_1997 AL---------AGTASADPVNWDAIAACESGGNWGINTGNGYYGGLQFNL
MLBr_02030|M.leprae_Br4923 SMALSTSTG--MANAVPREPNWDAVAQCESGRNWRANTGNGFYGGLQFKP
. ****:* **.* ** *****: ***:*.
MMAR_3776|M.marinum_M STWRANGGAGSAAGASREEQIRVAENVLRSQGIGAWPVCGRRG-------
MUL_3723|M.ulcerans_Agy99 STWRASGGAGSAAGASREEQIRVAENVLRSQGIGAWPVCGRRG-------
MAV_1722|M.avium_104 STWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCGRRG-------
Mb2477c|M.bovis_AF2122/97 GTWRANGGSGSAANASREEQIRVAENVLRSQGIRAWPVCGRRG-------
Rv2450c|M.tuberculosis_H37Rv GTWRANGGSGSAANASREEQIRVAENVLRSQGIRAWPVCGRRG-------
Mflv_2619|M.gilvum_PYR-GCK GTWQSNGGSGSPHHASREEQIRVANNVLQTQGIGAWPTCGGRG-------
Mvan_3962|M.vanbaalenii_PYR-1 GTWQSNGGSGSPHHASREEQIRVANNVLQTQGIGAWPSCGARG-------
MSMEG_4643|M.smegmatis_MC2_155 GTWRSHGGAGMPHQASRSEQIRVAENVLRTQGIGAWPVCGKRG-------
TH_0357|M.thermoresistible__bu STWRANGGTGMPHQASRAEQIRVAENTLRSQGIGAWPTCGKRG-------
MAB_1597|M.abscessus_ATCC_1997 GTWRANGGSGSPHLASREEQIRVAENVLARQGIGAWPVCGRRG-------
MLBr_02030|M.leprae_Br4923 TIWARYGGVGNPAGASREQQITVANRVLADQGLDAWPKCGAASDLPITLW
* ** * . *** :** **:..* **: *** ** .
MMAR_3776|M.marinum_M ------------------------------
MUL_3723|M.ulcerans_Agy99 ------------------------------
MAV_1722|M.avium_104 ------------------------------
Mb2477c|M.bovis_AF2122/97 ------------------------------
Rv2450c|M.tuberculosis_H37Rv ------------------------------
Mflv_2619|M.gilvum_PYR-GCK ------------------------------
Mvan_3962|M.vanbaalenii_PYR-1 ------------------------------
MSMEG_4643|M.smegmatis_MC2_155 ------------------------------
TH_0357|M.thermoresistible__bu ------------------------------
MAB_1597|M.abscessus_ATCC_1997 ------------------------------
MLBr_02030|M.leprae_Br4923 SHPAQGVKQIINDIIQMGDTTLAAIALNGL