For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3584 (-)

annotation: phage-related integrase
coordinates: 4404924 - 4405448
length: 174

LGGVFGVRSPTRTASRGTERRHRLGSTRQSVRCARPTAQRWPARRRQFARGGLQLAVMANTLGANPVRDV
QPIGLKRRPTGATALSADGLHDLLVRLRADYYCQRNDLVDPITVLIATGLRRSELLALRWTDFDETKQTI
AATGNVVRVLPRLLGSRRVPAVVGKTTVVSPMHG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3584--100% (174)phage-related integrase
M. marinum MMMAR_3607-2e-3349.33% (150) phage integrase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_1816c-3e-3255.56% (126) Phage integrase
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_3581-1e-5590.60% (117) phage-related integrase
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3584|M.marinum_M               --------------------MGGVFGVRSPTRT---ASRGTERR------
MUL_3581|M.ulcerans_Agy99           --------------------------------------------------
MAB_1816c|M.abscessus_ATCC_199      MAGRPPLRIGQHGKISRQYVGGGVWVARCRYRDSDGVTRIVERRGPVDDF
                                                                                      

MMAR_3584|M.marinum_M               -----------------------------------------HRLGSTRQS
MUL_3581|M.ulcerans_Agy99           --------------------------------------------------
MAB_1816c|M.abscessus_ATCC_199      DKHGKLAEDALIEALSDRRLPADTDTIGYDTLVMALVDQHIGRLSDDGRS
                                                                                      

MMAR_3584|M.marinum_M               --------------------VRCARPTAQRWPARRRQF------------
MUL_3581|M.ulcerans_Agy99           --------------------------------------------------
MAB_1816c|M.abscessus_ATCC_199      PATVATYKFASDKLRNFLGGVRVSEAHAARMDAALRSMRTAHGTTMARQA
                                                                                      

MMAR_3584|M.marinum_M               ---ARGGLQLAVMANTLGANPVRDVQPIGLKRRPTGATALSADGLHDLLV
MUL_3581|M.ulcerans_Agy99           ------------MASTLGANPVRDVQPIRLKRRPTGATALSADDLHDLLV
MAB_1816c|M.abscessus_ATCC_199      KTILQGGLQLAVMANVIPANPVRDVQSLRSKTRPKGATALSADQLRTLLA
                                                **..: ********.:  * **.******** *: **.

MMAR_3584|M.marinum_M               RLRADYYCQRNDLVDPITVLIATGLRRSELLALRWTDFDETKQTIAATGN
MUL_3581|M.ulcerans_Agy99           RLRADDYCQRNDLVDPITVLIATGVRRSELLALRWTDFDESKQTIAATGN
MAB_1816c|M.abscessus_ATCC_199      EIRASEYCAGNDLADPLIILMATGLRRSELLALRWSDFDANAGTLTVTGK
                                    .:**. **  ***.**: :*:***:**********:*** .  *::.**:

MMAR_3584|M.marinum_M               VVR---------------------------------------------VL
MUL_3581|M.ulcerans_Agy99           VVR---------------------------------------------VL
MAB_1816c|M.abscessus_ATCC_199      LVRATGAGLQRIDEAKTAAGMRTVALPSFAVTALRHRQGRDYVGQQLMIF
                                    :**                                             ::

MMAR_3584|M.marinum_M               PRLLGSRR-----------------VPAVVG---KTTVVSPMHG------
MUL_3581|M.ulcerans_Agy99           PGLLGSRR-----------------VPAVDG---TTAVISPMHG------
MAB_1816c|M.abscessus_ATCC_199      PSTAGTWRDPNNFGKQWRAVRDDLGVPGVTTHSFRKTMATLIDDNGLSAR
                                    *   *: *                 **.*      .:: : :..      

MMAR_3584|M.marinum_M               ---------------------------------------
MUL_3581|M.ulcerans_Agy99           ---------------------------------------
MAB_1816c|M.abscessus_ATCC_199      VGADQLGHAKVSMTQDRYMARGKVHHEVADLLDATISDE