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MSEQISEQSEQNVYGASSPVPAGESSPSAASAPRTKVRTHHLQKWKAEGHKWAMLTVYDYSTARAFDDAG IPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYESGPSAALAAATRFMKE AGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAF SVVMEMVPAELATQITGKLTIPTIGIGAGPSCDGQVLVWQDMAGLSSGKAPRFVKRYADVGGELRRAAVQ YAQDVAGGVFPAEEHCF
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3299 | panB | - | 100% (297) | 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2249 | panB | 1e-144 | 86.51% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. gilvum PYR-GCK | Mflv_2903 | panB | 1e-130 | 79.24% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. tuberculosis H37Rv | Rv2225 | panB | 1e-144 | 86.51% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. leprae Br4923 | MLBr_01635 | panB | 1e-135 | 82.25% (293) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. abscessus ATCC 19977 | MAB_1916c | panB | 1e-124 | 77.32% (291) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. avium 104 | MAV_2239 | panB | 1e-143 | 86.51% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. smegmatis MC2 155 | MSMEG_4298 | panB | 1e-130 | 79.58% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. thermoresistible (build 8) | TH_0416 | panB | 1e-132 | 80.28% (289) | Probable 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. ulcerans Agy99 | MUL_1330 | panB | 1e-168 | 99.33% (297) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
| M. vanbaalenii PYR-1 | Mvan_3602 | panB | 1e-129 | 78.55% (289) | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3299|M.marinum_M MSEQISEQSEQ--NVYGASSPVPAGESSPSAASAPR--TKVRTHHLQKWK
MUL_1330|M.ulcerans_Agy99 MSEQISEQSEQ--NVYGACPPVPAGESSPSAASAPR--TKVRTHHLQKWK
MAB_1916c|M.abscessus_ATCC_199 -------MSES--ALYGAASEKSTEPRTQPDALRAKRSSQTRVHHLQKWK
TH_0416|M.thermoresistible__bu ------MMSEH--SVYGAATDANTPARPRTQQSRTK----VRVHHLQKWK
Mflv_2903|M.gilvum_PYR-GCK -------MSEQ--SVYGAGAETAVSSAPRVKV---------RTHHLHKWK
Mvan_3602|M.vanbaalenii_PYR-1 -------MSEQ--PVYGAAAEAPK---PRVKV---------RTHHLHKWK
MSMEG_4298|M.smegmatis_MC2_155 -------MSEQ--PIYGAANTSQSVVDTKPAQR-----TKVRTLTLQKWK
Mb2249|M.bovis_AF2122/97 -------MSEQ--TIYGANTPGGS--GPRTKI---------RTHHLQRWK
Rv2225|M.tuberculosis_H37Rv -------MSEQ--TIYGANTPGGS--GPRTKI---------RTHHLQRWK
MAV_2239|M.avium_104 -------MSEH--NVYGAAQPAQPAQPAQPRTR-------IRTHHLQKMK
MLBr_01635|M.leprae_Br4923 -------MSEQNVNVYGADPSTSSIQSIQRTK--------IRTKHLQKMK
** :*** *. *:: *
MMAR_3299|M.marinum_M AEGHKWAMLTVYDYSTARAFDDAGIPVLLVGDSAANVVYGYDTTVPISID
MUL_1330|M.ulcerans_Agy99 AEGHKWAMLTVYDYSTARAFDDAGIPVLLVGDSAANVVYGYDTTVPISID
MAB_1916c|M.abscessus_ATCC_199 AEGHKWSMLTAYDYSTARVFNDAGIPVLLVGDSAANVVYGYDTTVPITID
TH_0416|M.thermoresistible__bu AEGHKWAMLTAYDYSTARIFDDAQIPVLLVGDSAANVVYGYDTTVPISVD
Mflv_2903|M.gilvum_PYR-GCK SEGHKWAMLTAYDYSTAAVFDEAQIPVLLVGDSAANVVYGYDTTVPVTLD
Mvan_3602|M.vanbaalenii_PYR-1 AEGHKWAMLTAYDYSTAAVFDEAEIPVLLVGDSAANVVYGYDTTVPVTLD
MSMEG_4298|M.smegmatis_MC2_155 AEGHKWAMLTCYDYSSARVFDDAGIPVLLVGDSAANVVYGYDTTVPISID
Mb2249|M.bovis_AF2122/97 ADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISID
Rv2225|M.tuberculosis_H37Rv ADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISID
MAV_2239|M.avium_104 AEGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPVSID
MLBr_01635|M.leprae_Br4923 AEGHKWAMLTAYDYSTARVFDEAGIPVLLVGDSAANVVYGYDTTVPVSAD
::****:*** ****:* *::* **********************:: *
MMAR_3299|M.marinum_M ELIPLVRGVVRGAPHALVVADLPFGSYESGPSAALAAATRFMKEAGAHAV
MUL_1330|M.ulcerans_Agy99 ELIPLVRGVVRGAPHALVVADLPFGSYESGPSAALAAATRFMKEAGAHAV
MAB_1916c|M.abscessus_ATCC_199 ELIPLVRGVVRGAPEALVVADLPFGSYEGGAAQALASATRFMKEAGAHAV
TH_0416|M.thermoresistible__bu ELIPLVRGVVRGAPHALVVADLPFGSYESGAQQALASATRFMKEAGAHAI
Mflv_2903|M.gilvum_PYR-GCK ELIPLVRGVVRGAPHALVVADLPFGSYEAGAQQALATATRMLKETGAHAV
Mvan_3602|M.vanbaalenii_PYR-1 ELIPLVRGVVRGAPHALVVADLPFGSYEAGPQQALATATRMLKETGAHAV
MSMEG_4298|M.smegmatis_MC2_155 ELIPLARAVVKGAPHALVIGDLPFGSYEDGPSQALATATRFMKEAGVHAV
Mb2249|M.bovis_AF2122/97 ELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAV
Rv2225|M.tuberculosis_H37Rv ELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAV
MAV_2239|M.avium_104 ELIPLVRGVVRGAPHALVVADLPFGSYEAGPAAALAAATRFMKEGGAHAV
MLBr_01635|M.leprae_Br4923 ELLPLVRGVVRGAGHALVVADLPFGSYEPGPTAALAVATRFMKEGGAHAV
**:**.*.**:** .***:.******** *. *** ***::*: *.**:
MMAR_3299|M.marinum_M KLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQ
MUL_1330|M.ulcerans_Agy99 KLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQ
MAB_1916c|M.abscessus_ATCC_199 KLEGGERVAEQIATLTAAGIPVVAHIGFTPQSVNGLGGYRVQGRDDAAAQ
TH_0416|M.thermoresistible__bu KLEGGERVAEQIATLTAAGIPVVAHIGFTPQSVNTLGGFRVQGRGEAGEQ
Mflv_2903|M.gilvum_PYR-GCK KLEGGERVAEQIAAVTAAGIPVMAHIGFTPQSVNGLGGFRVQGRGDAAEQ
Mvan_3602|M.vanbaalenii_PYR-1 KLEGGERVADQIAAVSAAGIPVMAHIGFTPQSVNGLGGFRVQGRGDAAEQ
MSMEG_4298|M.smegmatis_MC2_155 KLEGGERVADQIATLSRAGIPVVAHIGFTPQSVNGLGGFRVQGRGDAADQ
Mb2249|M.bovis_AF2122/97 KLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQ
Rv2225|M.tuberculosis_H37Rv KLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQ
MAV_2239|M.avium_104 KLEGGERVAEQIAHLTAAGIPVMAHIGFTPQSVNSLGGFRVQGRGDAAEQ
MLBr_01635|M.leprae_Br4923 KLEGGQRVAEQIACLTAAGIPVMAHIGFTPQSVNSLGGFRVQGRGGDAEQ
*****:***:*** :: *****:*********** ***:*****. . *
MMAR_3299|M.marinum_M TIADAIAVAEAGAFSVVMEMVPAELATQITGKLTIPTIGIGAGPSCDGQV
MUL_1330|M.ulcerans_Agy99 TIADAIAVAEAGAFSVVMEMVPAELATQITGKLTIPTIGIGAGPSCDGQV
MAB_1916c|M.abscessus_ATCC_199 LIHDAIAVQEAGAIAVVMEMVPAELATQITGKLTIPTVGIGAGRECDAQV
TH_0416|M.thermoresistible__bu TIHDALAVQEAGAVAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDAQV
Mflv_2903|M.gilvum_PYR-GCK TIHDAIAVQEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDAQV
Mvan_3602|M.vanbaalenii_PYR-1 TIHDAIAVQEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPSCDAQV
MSMEG_4298|M.smegmatis_MC2_155 TIRDAIAVAEAGAVAVVLEMVPAELATQITGKLTIPTVGIGAGPNCDAQV
Mb2249|M.bovis_AF2122/97 TIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQV
Rv2225|M.tuberculosis_H37Rv TIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQV
MAV_2239|M.avium_104 TIADAIAVAEAGAFSVVMEMVPAGLATQITGKLTIPTIGIGAGPNCDGQV
MLBr_01635|M.leprae_Br4923 TVADAVAVAEAGAFSVVMEMVPTELATQITGKLTIPTIGIGAGLNCDAQV
: **:** ****.:**:****: *************:***** .**.**
MMAR_3299|M.marinum_M LVWQDMAGLSSGKAPRFVKRYADVGGELRRAAVQYAQDVAGGVFPAEEHC
MUL_1330|M.ulcerans_Agy99 LVWQDMAGLSSGKAPRFVKRYADVGGELRRAAVQYAQDVAGGVFPAEEHC
MAB_1916c|M.abscessus_ATCC_199 LVWQDMAGMTSGKTAKFVKQFGQVGAELRKAAEQYADEVARGVFPAPEHS
TH_0416|M.thermoresistible__bu LVWQDMAGMTAGKTARFVKRFGEVGAELGRAAAQFAEEVAAGTFPAEQHC
Mflv_2903|M.gilvum_PYR-GCK LVWQDMAGMTNGRTAKFVKRFGAVGDELRRAATEYAQEVATGVFPAEEHS
Mvan_3602|M.vanbaalenii_PYR-1 LVWQDMAGMTNGKTAKFVKRFGAVGDELRRAASDYAREVATGAFPADEHS
MSMEG_4298|M.smegmatis_MC2_155 LVWQDMAGLTSGKTAKFVRRFGDVGGELHRAATQFADDVAAGVFPAEEHS
Mb2249|M.bovis_AF2122/97 LVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHS
Rv2225|M.tuberculosis_H37Rv LVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHS
MAV_2239|M.avium_104 LVWQDMAGMSSGKSARFVKRFADIGGELRRAATQYAHEVAAGVFPADEHC
MLBr_01635|M.leprae_Br4923 LVWQDMAGLSSGKVARFVKQYADIAGELRRAAMQYAEEVASAVFPAEEHC
********:: .: .:**:::. :. ** :** ::* :** ..*** :*.
MMAR_3299|M.marinum_M F
MUL_1330|M.ulcerans_Agy99 F
MAB_1916c|M.abscessus_ATCC_199 Y
TH_0416|M.thermoresistible__bu F
Mflv_2903|M.gilvum_PYR-GCK Y
Mvan_3602|M.vanbaalenii_PYR-1 Y
MSMEG_4298|M.smegmatis_MC2_155 Y
Mb2249|M.bovis_AF2122/97 F
Rv2225|M.tuberculosis_H37Rv F
MAV_2239|M.avium_104 F
MLBr_01635|M.leprae_Br4923 F
: