For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3254 (-)

annotation: hypothetical protein MMAR_3254
coordinates: 3962266 - 3963762
length: 498

MTASRLVGSNPRTPFGRLVTQGSFYSAGMQMGSGAVVLPVICAHQGLTWVAGLLFPAFSIGAILGNSVSP
LILQRFGQYRHLLMAAISASAATLILANAAVPWTGALVAAVFFVTATASGVVAGVSGVAYTDMISNKLSV
LRRGELLLTQGAVGSLLATGVTLVIVPRLAHGDEMARYHDLLWLGAASMIVAGVAALFVGPMRSASSAPT
VRLPLRDIYRQGFEIARREPWFRRYATTYLLFAPISLGTTFFSLRAAQSSGSLHVLVILSSIALVIGSLL
WRAVNRRFGVRGMLLGSSLFSIAAALVCIVAELCGQWTQMWAYGTAFLLATVAAQTVVAASISWISMFAP
EQHRATLICFGATLAAVVSTLLGAVLGELAQRHATIGPVLVSLTLAIIAAVASLRAPGLSQTIEAQSQLV
EKAPMRRLSRARRGAHRLVTGTAPGLGLALTRHTAADRRGRYPSLRRAHRRPAPSPIRPGCHASAHRPEP
GNLATVLT
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3254--100% (498)hypothetical protein MMAR_3254
M. marinum MMMAR_0508-3e-5632.99% (394) integral membrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2232-1e-17966.93% (508) integral membrane protein
M. gilvum PYR-GCK-----
M. tuberculosis H37RvRv2209-1e-17966.93% (508) integral membrane protein
M. leprae Br4923MLBr_02529-7e-0526.47% (272) hypothetical protein MLBr_02529
M. abscessus ATCC 19977MAB_2983c-4e-0525.48% (365) chloramphenicol resistance protein
M. avium 104-----
M. smegmatis MC2 155MSMEG_3369-2e-0524.25% (301) putative transport protein
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_3569-0.099.15% (470) hypothetical protein MUL_3569
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3254|M.marinum_M               --------MTASRLV--GSNPRTPFGRLVTQGSFYSAGMQMGSGAVVLPV
MUL_3569|M.ulcerans_Agy99           --------------------------------------MQMGSGAVVLPV
Mb2232|M.bovis_AF2122/97            --------MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPV
Rv2209|M.tuberculosis_H37Rv         --------MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPV
MAB_2983c|M.abscessus_ATCC_199      ---------------------MTLPIYALTLAIFAQGCSEFMFAGLITEV
MSMEG_3369|M.smegmatis_MC2_155      -MLLHTARSTRDAASETRSYPAVIALCMVITVIEGFNLIVYGSVVPMLLA
MLBr_02529|M.leprae_Br4923          MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPA
                                                                                  :  .

MMAR_3254|M.marinum_M               ICAHQGLTWVAG--LLFPAFSIGAILGNSVSPLILQRFGQYRHLLMAAIS
MUL_3569|M.ulcerans_Agy99           ICAHQGLTWVAG--LLFPAFSIGAILGNSVSPLILQRFGQYRHLLMAAIS
Mb2232|M.bovis_AF2122/97            ICAHQGLTWAAG--LLYPAFCIGAILGNSLSPLILQRAGQLRHLLMAAIS
Rv2209|M.tuberculosis_H37Rv         ICAHQGLTWAAG--LLYPAFCIGAILGNSLSPLILQRAGQLRHLLMAAIS
MAB_2983c|M.abscessus_ATCC_199      GDDFGVSLAAAG--TLTSAFAVGIIVGAPLMALISGRWPRRRALVLFLSV
MSMEG_3369|M.smegmatis_MC2_155      DASLGVTDEQTG--LIGGLVYIGAIIGSVAAPTLADRIGRKRVLVVAISV
MLBr_02529|M.leprae_Br4923          VKRLVVPAASDNDSPLAANASLHLSLAPIGGAPFSLDASLDTVGVVDGDL
                                               .   :     :   :.    . :          ::    

MMAR_3254|M.marinum_M               ASAATLILANAAVPWTGALVAAVFFVTATASGVVAGVSGVAYTDMISNKL
MUL_3569|M.ulcerans_Agy99           ASAATLILANAAVPWTGALVAAVFFVTATASGVVAGVSGVAYTDMVSNKL
Mb2232|M.bovis_AF2122/97            ATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSML
Rv2209|M.tuberculosis_H37Rv         ATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSML
MAB_2983c|M.abscessus_ATCC_199      FIAAHIVGATAAS------FPLLLIVRVVSAVANAGFLAVALTTAMS--I
MSMEG_3369|M.smegmatis_MC2_155      FAAGAILTGCSVS-------ALMLALARTVTGLGIGASLTTAMTVARNSA
MLBr_02529|M.leprae_Br4923          LALQPVPVGPAAPGIVEDIADAAMIFSTARLQSWGPTHIRRGALAATTAV
                                         :    :.           :                          

MMAR_3254|M.marinum_M               SVLRRGELLLTQGAVGSLLATGVTLVIVPRLAHGDEMARYH---DLLWLG
MUL_3569|M.ulcerans_Agy99           SVLRRGELLLTQGAFGSLLATGVTLVIVPRLAHGDEMARYH---DLLWLG
Mb2232|M.bovis_AF2122/97            PAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYH---DLLWLG
Rv2209|M.tuberculosis_H37Rv         PAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARYH---DLLWLG
MAB_2983c|M.abscessus_ATCC_199      TGPR------AKGRTTALLLSGITIACVAGVPGGAALGYFWGWRAALWAV
MSMEG_3369|M.smegmatis_MC2_155      AAAR-------ASLAMTVTMAGIPLGGVMAALLAVPILPAFGWRPMFFVG
MLBr_02529|M.leprae_Br4923          TFAATGLGVTYRAVTGALTGLLVVIVIAVLIALGGLVLRSRAARTGLVLS
                                    .           .   ::    : :  .     .  :         :   

MMAR_3254|M.marinum_M               AASMIVAGVAALFVGPM-RSASSAPTVRLPLRDIYRQGFEIARRE-----
MUL_3569|M.ulcerans_Agy99           AASMIVAGVAALFVGPM-RSASSAPTVRLPLRDIYRQGFEIARRE-----
Mb2232|M.bovis_AF2122/97            AAGLVCSGIAALFVGPM-RSVSVTTATRMPLREIYWMGFAIARSQ-----
Rv2209|M.tuberculosis_H37Rv         AAGLVCSGIAALFVGPM-RSVSVTTATRMPLREIYWMGFAIARSQ-----
MAB_2983c|M.abscessus_ATCC_199      VLVSVPALAAIMYALPVGRPVTGLPDGIGELRTLRNRRLQITLAA-----
MSMEG_3369|M.smegmatis_MC2_155      AGTGLIILVTVVFMAIPTDTPQELAGRLCSTREK--LAILFTGRG-----
MLBr_02529|M.leprae_Br4923          IAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALIVPGPERVRIV
                                        :    .                            : ..        

MMAR_3254|M.marinum_M               PWFRRYATTYLLFAPISLGTTFFSLRAAQSSGSLHVLVILSSIALVIGSL
MUL_3569|M.ulcerans_Agy99           PWFRRYATTYLLFAPISLGTTFFSLRAAQSSGSLHVLVILSSIAFVIGSL
Mb2232|M.bovis_AF2122/97            PWFRRYMTTYLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSM
Rv2209|M.tuberculosis_H37Rv         PWFRRYMTTYLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSM
MAB_2983c|M.abscessus_ATCC_199      GVLCNAATFCAFTYLAPVSVQVTSLSPAWTPALLALFGCGSFVGVHATGR
MSMEG_3369|M.smegmatis_MC2_155      LVVTAIVAGCAIANMVSWQGLNVWAAQAMVDLGFTLRTALLMTFVLTASA
MLBr_02529|M.leprae_Br4923          AFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSA
                                      .    .        .                : :            . 

MMAR_3254|M.marinum_M               LWRAVNRRFGVRGMLLGSSLFSIAAALVCIVAELCGQWTQMWAYGTAFLL
MUL_3569|M.ulcerans_Agy99           LWRAVNRRFGVRGMLLGSSLFSIAAALVCIVAELCGQWTQMWAYGTAFLL
Mb2232|M.bovis_AF2122/97            LWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLL
Rv2209|M.tuberculosis_H37Rv         LWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVHAWAYGTAFLL
MAB_2983c|M.abscessus_ATCC_199      LADSHANLVAGGGGVL----------LLAGWIAFAGTAAHDWLF--VTLV
MSMEG_3369|M.smegmatis_MC2_155      VAGSFLTAWAADRRGPAVVGIATAGSTFVGLAGLLTLPASLVTVVGCVAL
MLBr_02529|M.leprae_Br4923          LWARFPLPVIPAPGDPTPSAPSFQVLEDLPRRVRISSAHQSGFIAAATLL
                                    :                                                :

MMAR_3254|M.marinum_M               ATVAAQTVVAASISWISM----FAPEQHRATLICFGATLAAVVSTLLGAV
MUL_3569|M.ulcerans_Agy99           ATVAAQTVVAASISWISM----FAPEQHRATLICFGATLAAVVSTLLGAV
Mb2232|M.bovis_AF2122/97            ATVAAQTVVAASISWISV----LAPERYRATLICVGSTLAAVEATVLGVA
Rv2209|M.tuberculosis_H37Rv         ATVAAQTVVAASISWISV----LAPERYRATLICVGSTLAAVEATVLGVA
MAB_2983c|M.abscessus_ATCC_199      FALGALSFGVGSTLFSQG----LYAASDAPMLGSSLTTAAFNVGTVIGPS
MSMEG_3369|M.smegmatis_MC2_155      MGIGGHSTMNLIHATTAD----IYPLPARASALGWSN-GTSFVGSFTGPV
MLBr_02529|M.leprae_Br4923          SMLGSVAIALRPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQP
                                      :.. :               . .    .         .   . . .  

MMAR_3254|M.marinum_M               LG--ELAQRHATIGPVLVSLTLAIIAAVASLRAPG-LSQTIEAQSQLVEK
MUL_3569|M.ulcerans_Agy99           LG--ELAQRHATIGPVLVSLTLAIIAAVASLRAPG-LSQTIEAQSQLVDK
Mb2232|M.bovis_AF2122/97            LG--GIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATL
Rv2209|M.tuberculosis_H37Rv         LG--GIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSPQAATL
MAB_2983c|M.abscessus_ATCC_199      LGGASIHTPLGYRGPLWVSVMLAALALVVTLCGLQ---------------
MSMEG_3369|M.smegmatis_MC2_155      VG--GTAIATGGAHGLFEVFGAAAAVCFLSVSALY---------------
MLBr_02529|M.leprae_Br4923          YLVASVLLGLYTATGRYVAASAALLVLVVVVLAWAVVALNPRIASSDSYS
                                                          *  . .  : .                 

MMAR_3254|M.marinum_M               APMRRLSR-ARRGAHRLVTGTAPGLGLALTRHTAADRRGR----YPSLRR
MUL_3569|M.ulcerans_Agy99           APMRRLSR-ARRGAHRLVTGTAPGLGLALTRHTAADRRGR----YPSLRR
Mb2232|M.bovis_AF2122/97            QAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRR
Rv2209|M.tuberculosis_H37Rv         QAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRR
MAB_2983c|M.abscessus_ATCC_199      ---------ARRRTRRAVTSARSS--------------------------
MSMEG_3369|M.smegmatis_MC2_155      -------VADRRGRRQPTAGTDQSANSETVAIAFR---------------
MLBr_02529|M.leprae_Br4923          LPLRRLLGMVASGLDASLIPAMAYLVSLFSWVLNR---------------
                                                                                      

MMAR_3254|M.marinum_M               AHRRPAP----SPIRPGCHASAHRPEPGNLATVLT--
MUL_3569|M.ulcerans_Agy99           AHRRPAP----SPIRPGCHASAHRPEPGNLATVLT--
Mb2232|M.bovis_AF2122/97            AARRPAPGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Rv2209|M.tuberculosis_H37Rv         AARRPAPGKPAAALPQPRHPAVGVREGAPLDAGQRIA
MAB_2983c|M.abscessus_ATCC_199      -------------------------------------
MSMEG_3369|M.smegmatis_MC2_155      -------------------------------------
MLBr_02529|M.leprae_Br4923          -------------------------------------