For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIGFAPISAPDALAEAAARARQDALTKPRGALGRLEDLSAWVASCQGQCPPRQFQRARVVVFAGDHGVTR SGVSAYPPDVTAQMVANIDGGGAAINALADVAGATVRVVDLAVDAEALSEQIGAHKVRRGSGDIATEDAL TDDQTAAAIAAGQQIADAEVDAGADLLIAGDMGIGNTTPAAVLVAALTNTEPVAVVGFGTGVDDATWSRK TAAVRDALFRSARVLPDPVALLRCCGGADLAAMAGFCAQAAVRRTPLLLDGMAVTAAALVAERLAPGARQ WWQAGHRSTEPGHQLALTALALDPVVDLRMRLGEGTGATVALPVLRAAVAALSSMATFAEAGVSTACDDA GATEPPES
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3252 | cobT | - | 100% (358) | nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2230 | cobT | 1e-169 | 85.15% (357) | nicotinate-nucleotide--dimethylbenzimidazole |
M. gilvum PYR-GCK | Mflv_2942 | cobT | 1e-143 | 75.66% (341) | nicotinate-nucleotide--dimethylbenzimidazole |
M. tuberculosis H37Rv | Rv2207 | cobT | 1e-169 | 85.15% (357) | nicotinate-nucleotide--dimethylbenzimidazole |
M. leprae Br4923 | MLBr_00868 | cobT | 1e-162 | 81.59% (353) | nicotinate-nucleotide--dimethylbenzimidazole |
M. abscessus ATCC 19977 | MAB_1953c | cobT | 1e-129 | 70.85% (343) | nicotinate-nucleotide--dimethylbenzimidazole |
M. avium 104 | MAV_2283 | cobT | 1e-158 | 81.82% (341) | nicotinate-nucleotide--dimethylbenzimidazole |
M. smegmatis MC2 155 | MSMEG_4275 | cobT | 1e-141 | 73.26% (344) | nicotinate-nucleotide--dimethylbenzimidazole |
M. thermoresistible (build 8) | TH_1436 | cobT | 1e-139 | 71.88% (345) | Probable nicotinate-nucleotide-dimethylbenzimidazol |
M. ulcerans Agy99 | MUL_3565 | cobT | 0.0 | 99.44% (358) | nicotinate-nucleotide--dimethylbenzimidazole |
M. vanbaalenii PYR-1 | Mvan_3571 | cobT | 1e-144 | 75.95% (341) | nicotinate-nucleotide--dimethylbenzimidazole |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4275|M.smegmatis_MC2_155 ----MTDTQVTFDSVVTPDADAAAAARDRQKRLTKPPGSLGRLEELSVWV TH_1436|M.thermoresistible__bu ------VSTVDIGPVEPPDEAAAAAARARQGELTKPAGSLGRLEDLSVWV Mflv_2942|M.gilvum_PYR-GCK --------MAYFPDVPAPDPEAAAAARDRQAILTKPSGALGRLEDLSVWV Mvan_3571|M.vanbaalenii_PYR-1 --------MAYFPEIPAPDADAAAAARARQALLTKPAGALGRLEDLSVWV MAB_1953c|M.abscessus_ATCC_199 MTQAEPPEAPRFAPVSAPDPGIADAARARQHRLTKPTGALGRLEELSVWA MMAR_3252|M.marinum_M --------MIGFAPISAPDALAEAAARARQDALTKPRGALGRLEDLSAWV MUL_3565|M.ulcerans_Agy99 --------MIGFAPISAPDALAEAAARARQDALTKPRGALGRLEDLSAWV Mb2230|M.bovis_AF2122/97 --------MIGFAPVSTPDAAAEAAARARQDSLTKPRGALGSLEDLSVWV Rv2207|M.tuberculosis_H37Rv --------MIGFAPVSTPDAAAEAAARARQDSLTKPRGALGSLEDLSVWV MLBr_00868|M.leprae_Br4923 ---------MEFAPVSPPDGHAAAAARARQDTLTKPRGALGRLEDLSIWV MAV_2283|M.avium_104 ---------MEFATVSPPDPGAAAAARARQDTLTKPRGALGRLEDLSVWI : : .** *** ** **** *:** **:** * MSMEG_4275|M.smegmatis_MC2_155 AACQGTCPPQPLTRPRIVVFAGDHGVTKSGVSAFPAEVTAQMVANFDAGG TH_1436|M.thermoresistible__bu ASCQSLCPPRQFERARVVVFAGDHGVARAGVSAYPVEVTAQMMANFQTGG Mflv_2942|M.gilvum_PYR-GCK ASCQGVCPPKQFERARVVVFAGDHGVARAGVSAYPAEVTAAMVANFAAGG Mvan_3571|M.vanbaalenii_PYR-1 AACQGGCPPRQFERARVVVFAGDHGVAASGVSAYPADVTAAMVANIAAGG MAB_1953c|M.abscessus_ATCC_199 AACQNRCPPTTFQRPRVVVFAGDHGVAAAGVSAYPASVTAQMVRNMDAGG MMAR_3252|M.marinum_M ASCQGQCPPRQFQRARVVVFAGDHGVTRSGVSAYPPDVTAQMVANIDGGG MUL_3565|M.ulcerans_Agy99 ASCQGQCPPRQFQRARVVVFAGDHGITRSGVSAYPPDATAQMVANIDGGG Mb2230|M.bovis_AF2122/97 ASCQQRCPPRQFERARVVVFAGDHGVARSGVSAYPPEVTAQMVANIDAGG Rv2207|M.tuberculosis_H37Rv ASCQQRCPPRQFERARVVVFAGDHGVARSGVSAYPPEVTAQMVANIDAGG MLBr_00868|M.leprae_Br4923 ASCQGQCPPRQFQRARIVVFAGDHGVARSGVSAYPPQLTAQMVANIDRGG MAV_2283|M.avium_104 AACQGQCPPRQFERARVVVFAGDHGVARCGVSAYPPEVTAQMVANFDAGG *:** *** : *.*:********:: .****:* . ** *: *: ** MSMEG_4275|M.smegmatis_MC2_155 AAINVLADAAGATVRVVDICVDCDQPLSPAVGAHKVRRGSGNIAVEDALS TH_1436|M.thermoresistible__bu AAINVLAGVAGAGVRVVDMAVDVDEPLTEAIGRHKIRRGSGNIAVEDALT Mflv_2942|M.gilvum_PYR-GCK AAVNVLAEVAGASVRVVDMAVDVAEPLSPAIGAHKIRRSSGDIAVEDALT Mvan_3571|M.vanbaalenii_PYR-1 AAVNVLAEVAGASVRVADIAVDTAEPLSPAIGADKIRRSSGNIAVEDALT MAB_1953c|M.abscessus_ATCC_199 AAVNVLAALTGAGVRVADMAVG---------------RPSGNIAVEDALT MMAR_3252|M.marinum_M AAINALADVAGATVRVVDLAVDAE-ALSEQIGAHKVRRGSGDIATEDALT MUL_3565|M.ulcerans_Agy99 AAINALADVAGATVRVVDLAVDAE-ALSEQIGAHKVRRGSGDIATEDALT Mb2230|M.bovis_AF2122/97 AAINALADVAGATVRVADLAVDAD-PLSERIGAHKVRRGSGNIATEDALT Rv2207|M.tuberculosis_H37Rv AAINALADVAGATVRVADLAVDAD-PLSERIGAHKVRRGSGNIATEDALT MLBr_00868|M.leprae_Br4923 AAINALASIADATIRIADLAVDAD-PLSQQIGIHKVRRGSGDIAIQDALT MAV_2283|M.avium_104 AAINALAGVAGASVRVADLAVDAD-PPDDRIGANKVRRGSGDITVQDALT **:*.** :.* :*:.*:.*. * **:*: :***: MSMEG_4275|M.smegmatis_MC2_155 AEEAAAAVDAGRRIADEEVDAGADLLIAGDMGIGNTTAATTLVAALSGAE TH_1436|M.thermoresistible__bu AEQTVAAVQAGRRIADEEVDAGADLLIAGDMGIGNTTAATALIGTLTDTE Mflv_2942|M.gilvum_PYR-GCK PDEVVRAIDAGRRIADEEVDSGADLLIAGDMGIGNTTPATTLVAALTDSE Mvan_3571|M.vanbaalenii_PYR-1 PDEVVAAVDAGRRIADEEVDSGADLLIAGDMGIGNTTPATTLIAAMTDSE MAB_1953c|M.abscessus_ATCC_199 GEQTHAALAAGIALADAEVDGGADLLIAGDMGIGNTTPATVLVAALTGSE MMAR_3252|M.marinum_M DDQTAAAIAAGQQIADAEVDAGADLLIAGDMGIGNTTPAAVLVAALTNTE MUL_3565|M.ulcerans_Agy99 DDQTAAAIAAGQQIADAEVDAGADLLIAGDMGIGNTTPAAVLVAALTNTE Mb2230|M.bovis_AF2122/97 NDETAAAITAGQQIADEEVDAGADLLIAGDMGIGNTTAAAVLVAALTDAE Rv2207|M.tuberculosis_H37Rv NDETAAAITAGQQIADEEVDAGADLLIAGDMGIGNTTAAAVLVAALTDAE MLBr_00868|M.leprae_Br4923 EDETARAIIAGQRIADEEVDRGADLLIAGDIGIGNTTAAAVLVAALTNAE MAV_2283|M.avium_104 AEETERALSAGAAIADEEVDAGADLLIAGDMGIGNTTAAAVLVAALTNVE ::. *: ** :** *** *********:******.*:.*:.:::. * MSMEG_4275|M.smegmatis_MC2_155 PVAVVGRGTGIDDQGWMRKTSAVRDALYRARGVVDDPLGLLRVCGGADLA TH_1436|M.thermoresistible__bu PVAVIGRGTGIDDTGWMRKTAAVRDAMFRARRAGSDPITLLRVCGGADLA Mflv_2942|M.gilvum_PYR-GCK PVVVVGRGTGIDDAGWMRKTAAVRDALYRTRRLSADPVALLRICGGADLA Mvan_3571|M.vanbaalenii_PYR-1 PVAVVGRGTGIDDAGWARKTAAIRDALYRTRRLSADPIALLRICGGADLA MAB_1953c|M.abscessus_ATCC_199 PVAVVGRGTGVDDAGWMRKTAAVRDALRRTKDVRTDPVALLGVAGGADLA MMAR_3252|M.marinum_M PVAVVGFGTGVDDATWSRKTAAVRDALFRSARVLPDPVALLRCCGGADLA MUL_3565|M.ulcerans_Agy99 PVAVVGFGTGVDDATWSRKTAAVRDALFRSARVLPDPVALLRCCGGADLA Mb2230|M.bovis_AF2122/97 PVAVVGFGTGIDDAGWARKTAAVRDALFRVRPVLPDPVGLLRCAGGADLA Rv2207|M.tuberculosis_H37Rv PVAVVGFGTGIDDAGWARKTAAVRDALFRVRPVLPDPVGLLRCAGGADLA MLBr_00868|M.leprae_Br4923 PVAVVGFGTGIDDASWARKTAAVRDALCRIRLVLPDPVGLLRCCGGADLA MAV_2283|M.avium_104 PVVAVGFGTGIDDAGWARKTAAVRDALFRARRVLPDPVALLRCAGGADLA **..:* ***:** * ***:*:***: * **: ** .****** MSMEG_4275|M.smegmatis_MC2_155 AMAGFCAQAAVRRTPVLLDGLVVTAAALVADRLAPGARAWWQAGHRSTEP TH_1436|M.thermoresistible__bu AITGLLAQAAVRRTPVLLDGLVSAAAALLAEQLAPGARQWWQAGHRSTEP Mflv_2942|M.gilvum_PYR-GCK AMTGFCAQAAVRRTPVLLDGMVVTAAALAADTLAPGARQWWQAGHRSTEP Mvan_3571|M.vanbaalenii_PYR-1 AMTGFCAQAAVRRTPLVLDGMVVTAAALAAERLAPGARLWWQAGHRSTEP MAB_1953c|M.abscessus_ATCC_199 AMTGFLAQAAVRRTPVLLDGLVVTSAALVAEQLAPGARQWWLAGHRSTEP MMAR_3252|M.marinum_M AMAGFCAQAAVRRTPLLLDGMAVTAAALVAERLAPGARQWWQAGHRSTEP MUL_3565|M.ulcerans_Agy99 AMAGFCAQAAVRRTPLLLDGMAVTAAALVAERLAPGARQWWQAGHRSTEP Mb2230|M.bovis_AF2122/97 AIAGFCAQAAVRRTPLLLDGVAVTAAALVAERLAPGAHRWWQAGHRSSEP Rv2207|M.tuberculosis_H37Rv AIAGFCAQAAVRRTPLLLDGVAVTAAALVAERLAPGAHRWWQAGHRSSEP MLBr_00868|M.leprae_Br4923 AMAGFCAQAAVRRTPLLLDGMVVTAAALVAERLAPGSWQWWQAGHQSTEP MAV_2283|M.avium_104 ALAGFCAQAAVRRTPLLLDGMAVTAAALVAEHLAPGARLWWQAGHRSTEP *::*: *********::***:. ::*** *: ****: ** ***:*:** MSMEG_4275|M.smegmatis_MC2_155 AHALALTQLQLEPIVDLQMRLGEGTGAAVALPVVRAAVATLTSMATFDEA TH_1436|M.thermoresistible__bu AHALALQRLELEPILDLGMRLGEGTGAAMALPVVRAAVAVLADMATFDEA Mflv_2942|M.gilvum_PYR-GCK AHSLALQRLDLTPLLELDMRLGEGSGAVVALPVLRAAVATLASMATFEEA Mvan_3571|M.vanbaalenii_PYR-1 AHTLALRDLGLEPLVELGMRLGEGSGALVALPVLRAAVATLASMATFEEA MAB_1953c|M.abscessus_ATCC_199 AHSLALQRLRLDPVLDLQMRLGEGSGALVALPVLQAAVGTLAQMATFDEA MMAR_3252|M.marinum_M GHQLALTALALDPVVDLRMRLGEGTGATVALPVLRAAVAALSSMATFAEA MUL_3565|M.ulcerans_Agy99 GHQLALTALALDPVVDLRMRLGEGTGATVALPVLRAAVAALSSMATFAEA Mb2230|M.bovis_AF2122/97 GHGLALAALGLDPIVDLHMRLGEGTGAAVALMVLRAAVAALSSMATFTEA Rv2207|M.tuberculosis_H37Rv GHGLALAALGLDPIVDLHMRLGEGTGAAVALMVLRAAVAALSSMATFTEA MLBr_00868|M.leprae_Br4923 GHALALAALDLDPILDLRMRLGEGTGATAALLVLRAAVAALTSMTTFAEA MAV_2283|M.avium_104 GHALALTALDLEPILDLRMRLGEGTGAALALPIVRAAVAALSSMATFAQA .* *** * * *:::* ******:** ** :::***..*:.*:** :* MSMEG_4275|M.smegmatis_MC2_155 GISES--------------- TH_1436|M.thermoresistible__bu RVSTGP-------------- Mflv_2942|M.gilvum_PYR-GCK GIGAEQT------------- Mvan_3571|M.vanbaalenii_PYR-1 GIGGG--------------- MAB_1953c|M.abscessus_ATCC_199 RVDTA--------------- MMAR_3252|M.marinum_M GVST-ACDDAGATEPPES-- MUL_3565|M.ulcerans_Agy99 GVST-ACDDAGATEPPES-- Mb2230|M.bovis_AF2122/97 GVSTRSVDGVDRTAPPAVSP Rv2207|M.tuberculosis_H37Rv GVSTRSVDGVDRTAPPAVSP MLBr_00868|M.leprae_Br4923 GVAG------TSTSPPS--- MAV_2283|M.avium_104 GVSD------PSAHP----- :