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M. marinum M MMAR_3124 (-)

annotation: integrase
coordinates: 3808039 - 3809685
length: 548 

SLRFAFYGRVSTEDAQDPEASRSWQKRRAMDLITPHGGFIAADYFDVGQSRSLPWKRRPEASRLLADVAC
RDRSFDAVVIGEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARI
QMRVRTAMSALAHDTARYLGGRPPYGYRLVDAGPHPNPAKANLGQRLHRLEPDPATSSVVERIYRMYADG
AGLRYIAQRLTDDGVPSPSQYDPARNRHRDPRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLVNPDDVA
AGYETRMRWRDEADWIAPERRTHEALIRDELAQAVRLRMQARRGPGLVCSRESTVPYALRGLLFCAACGR
RMQGAARAGKRTTRILYRCELGKSRSVPADLSDHPRTVYLREDEVTARLDEWIATLADPADLARGQDADP
VAGAGYAALRRQLSEANAKVAALVTAVESGVAVEDLTVALRRRTAERDELKVRLEQAERPRVMTAAQISE
LVEELGGLSAVLGEATGAERAQVYASLGLRLDYDPHLQRVTATADLSRVAGRVRGGT*

Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3124--100% (548)integrase
M. marinum MMMAR_2129-9e-1123.19% (526) site-specific integrase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1612c-1e-0623.41% (504) phiRv1 integrase
M. gilvum PYR-GCKMflv_3036-0.091.79% (548) recombinase
M. tuberculosis H37RvRv1586c-1e-0623.41% (504) phiRv1 integrase
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2101-0.090.33% (548) recombinase
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3124|M.marinum_M               ----MSLRFAFYGRVSTEDAQDPEASRSWQKRRAMDLITPHGGFIAADYF
Mflv_3036|M.gilvum_PYR-GCK          ----MSLRFAFYGRVSTEDAQDPDASRSWQKRRATDLITPHGGVLAADYF
MAB_2101|M.abscessus_ATCC_1997      ----MSLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYF
Mb1612c|M.bovis_AF2122/97           MRYTTPVRAAVYLRIS-EDRSGEQLGVARQREDCLKLCGQRK-WVPVEYL
Rv1586c|M.tuberculosis_H37Rv        MRYTTPVRAAVYLRIS-EDRSGEQLGVARQREDCLKLCGQRK-WVPVEYL
                                         .:* *.* *:* ** .. : . : *:. . .*   :   :..:*:

MMAR_3124|M.marinum_M               DVGQSRSLPWKRRPEASRLLADVACRDRSFDAVVIGEPARAFYGPQFALT
Mflv_3036|M.gilvum_PYR-GCK          DVGQSRSLPWKRRPEASRLLIDVASRDRNFDAVVIGEPARAFYGPQFALT
MAB_2101|M.abscessus_ATCC_1997      DIGQSRSLPWKRRPEASRLLADVTSRDRGFDAVVIGEPARAFYGPQFALT
Mb1612c|M.bovis_AF2122/97           DNDVS-ASTGKRRPAYEQMLADITAG--KIAAVVAWDLDRLHRRPIELEA
Rv1586c|M.tuberculosis_H37Rv        DNDVS-ASTGKRRPAYEQMLADITAG--KIAAVVAWDLDRLHRRPIELEA
                                    * . * : . ****  .::* *::.    : ***  :  * .  *    :

MMAR_3124|M.marinum_M               FPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVR
Mflv_3036|M.gilvum_PYR-GCK          FPVLTHHGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVR
MAB_2101|M.abscessus_ATCC_1997      FPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVR
Mb1612c|M.bovis_AF2122/97           FMSLADE-KRLALATVAGDVDLATPQGRLVARLKGSVAAHETEHKKARQR
Rv1586c|M.tuberculosis_H37Rv        FMSLADE-KRLALATVAGDVDLATPQGRLVARLKGSVAAHETEHKKARQR
                                    *  *:.    * :. *.* ** .:    **  * *.::  *  : : * *

MMAR_3124|M.marinum_M               TAMSALAHDTARYLGGRPPYGYRLVDAGPHPNPAKANLGQRLHRLEPDPA
Mflv_3036|M.gilvum_PYR-GCK          TAMSALAQDTNRYLGGRPPYGYRLVDAGPHPNAAKANLGQRLHRLEPDPA
MAB_2101|M.abscessus_ATCC_1997      TAMSALAQDTTRYLGGRPPYGYQLVDAGPHPNPAKASLGQRLHRLEPDPE
Mb1612c|M.bovis_AF2122/97           RAARQKAERGHPNWS--KAFGYLPGPNGPEP----------------DPR
Rv1586c|M.tuberculosis_H37Rv        RAARQKAERGHPNWS--KAFGYLPGPNGPEP----------------DPR
                                     *    *.      .   .:**     **.*                ** 

MMAR_3124|M.marinum_M               TSSVVERIYRMYADGAGLRYIAQRLTDDGVPSPSQYDPARNRHRDPRGWS
Mflv_3036|M.gilvum_PYR-GCK          TSSVVERIYRMYADGAGLRYIAQELTDDGVPSPSQYDPARNRHRDPRGWS
MAB_2101|M.abscessus_ATCC_1997      TAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHRDPRGWS
Mb1612c|M.bovis_AF2122/97           TAPLVKQAYADILAGASLGDVCRQWNDAGAFTITG-----------RPWT
Rv1586c|M.tuberculosis_H37Rv        TAPLVKQAYADILAGASLGDVCRQWNDAGAFTITG-----------RPWT
                                    *:. *:: *     **.*  :.:. .* *. : :            * *:

MMAR_3124|M.marinum_M               HSAIRAILDNPAYRGIRVWGKQEKYEVLVNPDDVAAGYETRMRWRDEADW
Mflv_3036|M.gilvum_PYR-GCK          HSAIRAILDNPTYLGVRVWGKQEKYEVLVDPDDVAAGYETRMRWRDQADW
MAB_2101|M.abscessus_ATCC_1997      HSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADW
Mb1612c|M.bovis_AF2122/97           TTTLSKFLRKPRNAGLRAY-KGARYGPVDR--DAIVGKAQWSPLVDEATF
Rv1586c|M.tuberculosis_H37Rv        TTTLSKFLRKPRNAGLRAY-KGARYGPVDR--DAIVGKAQWSPLVDEATF
                                     :::  :* :*   *:*.: *  :*  :    *. .*        *.* :

MMAR_3124|M.marinum_M               IAPERRTHEALIRDELAQAVRLRMQARRGPGLVCSRESTVPYALRGLLFC
Mflv_3036|M.gilvum_PYR-GCK          IAPDRRTHEALIHDDLAQAVRLRTLARRGPGLVCSRESIVPYALRGLLFC
MAB_2101|M.abscessus_ATCC_1997      IAPDRRTHEELIPDELAQAVRLRMQARRGPGRVCSRESTVPYALRGLLFC
Mb1612c|M.bovis_AF2122/97           WAAQ--------------------AVLDAPGRAPGRKSVRRHLLTGLAGC
Rv1586c|M.tuberculosis_H37Rv        WAAQ--------------------AVLDAPGRAPGRKSVRRHLLTGLAGC
                                     *.:                     .  .** . .*:*   : * **  *

MMAR_3124|M.marinum_M               AACGRRMQGAARAGKRTTRILYRCELGKSRSVPADLSDHPRTVYLREDEV
Mflv_3036|M.gilvum_PYR-GCK          AACGRRMQGAARVGKQTTRILYRCELGKSRSVPADLSDHPRTVYLREDEV
MAB_2101|M.abscessus_ATCC_1997      AACGRRMQGAARPGKQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAV
Mb1612c|M.bovis_AF2122/97           GKCGNHLAGSYRTDG---QVVYVCKACHGVAILADNIEP--ILYHIVAER
Rv1586c|M.tuberculosis_H37Rv        GKCGNHLAGSYRTDG---QVVYVCKACHGVAILADNIEP--ILYHIVAER
                                    . **.:: *: * .    :::* *:  :. :: .*  :    :*      

MMAR_3124|M.marinum_M               TARLDEWIATLADPADLARGQDADPVAGAGYAALRRQLSEANAKVAALVT
Mflv_3036|M.gilvum_PYR-GCK          TVQLDEWIATLADPDDLARGQDADSAARTGYAALQRQLSEANRKVAALVN
MAB_2101|M.abscessus_ATCC_1997      TARLDEWIATLADPEDLARGQDVDPAAGPGYAALQRQLSEANAKVAALIT
Mb1612c|M.bovis_AF2122/97           LAMPDAVDLLRREIHDAAEAETIRLELETLYGELDRLAVER---AEGLLT
Rv1586c|M.tuberculosis_H37Rv        LAMPDAVDLLRREIHDAAEAETIRLELETLYGELDRLAVER---AEGLLT
                                     .  *       :  * *..:       . *. * *   *    . .*:.

MMAR_3124|M.marinum_M               AVESGVAVEDLTVALRRRTAERDELKVRLEQAERPRVMTAAQISELVEEL
Mflv_3036|M.gilvum_PYR-GCK          AVESGVAVEDLTAALRRRTAERDELKARLERAERPLAMSAAQISELVEEL
MAB_2101|M.abscessus_ATCC_1997      AVESGVAVEDLTAALRQRTAERDELRARVERVERPRAMCAAEISELVKEL
Mb1612c|M.bovis_AF2122/97           ARQVKISTDIVNAKITK-------LQARQQDQERLRVFDGIPLG--TPQV
Rv1586c|M.tuberculosis_H37Rv        ARQVKISTDIVNAKITK-------LQARQQDQERLRVFDGIPLG--TPQV
                                    * :  ::.: :.. : :       *:.* :  **  .: .  :.  . ::

MMAR_3124|M.marinum_M               GGLSAVLGEATGAERAQVYASLGLRLDYDPHLQRVTATADLSRVAGRVRG
Mflv_3036|M.gilvum_PYR-GCK          GGLAAVLGEATGAERAQVYASLGLRLDYDPHLRQVTATADLSRVAGCVRG
MAB_2101|M.abscessus_ATCC_1997      GGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRVAGCVRG
Mb1612c|M.bovis_AF2122/97           AGMIAELSPDRFRAVLDVLAEVVVQP-----VGKSGRIFNPERVQVNWR-
Rv1586c|M.tuberculosis_H37Rv        AGMIAELSPDRFRAVLDVLAEVVVQP-----VGKSGRIFNPERVQVNWR-
                                    .*: . *.        :* *.: ::      : :     : .**    * 

MMAR_3124|M.marinum_M               GT
Mflv_3036|M.gilvum_PYR-GCK          GT
MAB_2101|M.abscessus_ATCC_1997      GT
Mb1612c|M.bovis_AF2122/97           --
Rv1586c|M.tuberculosis_H37Rv        --