For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TSIDTRSTPEPAAETGRSRRWQRRSWAGRMFVAPNMAAVAVFLLFPLGFSLYMSFQNWDLFRAPTFVGLQ NFAKLFTSDPLFLIALRNSVVYTAGTVVPTVLISLVVAAVLNRKVPGIGVFRTIVFLPLAISSVVMAVVW QFVFDTNNGLLNIILGWIGVGPVPWLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQGVPETVYEAAKID GAGEIRQFVSITVPLIRGAMSFVVVISIIHAFQAFDLVYVLTGPNGGPETGTYVLGIMLFQHAFSFLEFG YASALAWVIFAILLVLTVLQLRITRRRSWEASSGLS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3013 | - | - | 100% (317) | ABC-type sugar transport integral membrane protein |
| M. marinum M | MMAR_3617 | uspA | 1e-40 | 32.61% (276) | sugar-transport integral membrane protein ABC transporter |
| M. marinum M | MMAR_1898 | ugpA | 1e-38 | 32.78% (299) | SN-glycerol-3-phosphate transport integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2066c | - | 1e-148 | 86.24% (298) | sugar-transport integral membrane protein ABC transporter |
| M. gilvum PYR-GCK | Mflv_3852 | - | 7e-31 | 28.37% (282) | binding-protein-dependent transport systems inner membrane |
| M. tuberculosis H37Rv | Rv2040c | - | 1e-148 | 86.24% (298) | sugar-transport integral membrane protein ABC transporter |
| M. leprae Br4923 | MLBr_01426 | - | 1e-144 | 78.06% (319) | putative ABC-transport protein, inner membrane component |
| M. abscessus ATCC 19977 | MAB_1717c | - | 3e-40 | 32.61% (276) | sugar ABC transporter, permease protein |
| M. avium 104 | MAV_2477 | - | 1e-144 | 77.74% (319) | sugar ABC transporter permease |
| M. smegmatis MC2 155 | MSMEG_0516 | - | 2e-53 | 39.18% (291) | sugar transport system |
| M. thermoresistible (build 8) | TH_2010 | - | 2e-35 | 29.53% (298) | sugar ABC transporter permease protein |
| M. ulcerans Agy99 | MUL_2254 | - | 1e-178 | 98.74% (317) | ABC-type sugar transport integral membrane protein |
| M. vanbaalenii PYR-1 | Mvan_2543 | - | 6e-31 | 28.97% (290) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3013|M.marinum_M --------MTSIDTRSTPEPAAETGRSRR--WQRRSWAGRMFVAPNMAAV
MUL_2254|M.ulcerans_Agy99 --------MTSIDTRSTPEPGAETGRSRR--WQRRSWAGRMFVAPNLAAV
Mb2066c|M.bovis_AF2122/97 -------------------------MTRR--RGRRAWAGRMFVAPNLAAV
Rv2040c|M.tuberculosis_H37Rv -------------------------MTRR--RGRRAWAGRMFVAPNLAAV
MLBr_01426|M.leprae_Br4923 --------MTSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASV
MAV_2477|M.avium_104 --------MTALDT----EAGRRTPKNPSP-WRRHAWAGRLFVAPNMVAV
MSMEG_0516|M.smegmatis_MC2_155 --------MT------GHVATRHSWRDRLG--HSEHVAGWTLVSPAVVLI
MAB_1717c|M.abscessus_ATCC_199 -------------------------MSRS----RQTAVAYGLLAPSLFGV
Mflv_3852|M.gilvum_PYR-GCK --------MTAPADAPIQKDPGKPSVSER--AKGERRLGLYLTLPSYVVM
Mvan_2543|M.vanbaalenii_PYR-1 --------MTALHEAPIQKDPGTPAVSER--ARGERRLGIYLTLPSYVVM
TH_2010|M.thermoresistible__bu MTAIAPGASEHLTGSEADRVARIKHAKQQGVSRAEGWRRRGPLLPALIFM
. * :
MMAR_3013|M.marinum_M AVFLLFPLGFSLYMSFQNWDLFRAPT--FVGLQNFAKLFTSDPLFLIALR
MUL_2254|M.ulcerans_Agy99 AVFLLFPLGFSLYMSFQNWDLFRAPT--FVGLQNFAKLFTSDPLFLIALR
Mb2066c|M.bovis_AF2122/97 VVFMLFPLGFSLYMSFQKWDLFTHAT--FVRLDNFRNLFTSDPLFLIAVV
Rv2040c|M.tuberculosis_H37Rv VVFMLFPLGFSLYMSFQKWDLFTHAT--FVRLDNFRNLFTSDPLFLIAVV
MLBr_01426|M.leprae_Br4923 SVFMLFPLGFSLYMSFQKWDMFTPPV--FVGLANFQNLFTSDPLFLIALC
MAV_2477|M.avium_104 AVFMLFPLGFSLYMSFQRWDVFTPPK--FVGLKNFTDLFSSDPLFLIAIR
MSMEG_0516|M.smegmatis_MC2_155 GVFGLLPVLMSLTLSFQHSDLLTPETP-WVGLENYRKLAD-DPVFVDAIK
MAB_1717c|M.abscessus_ATCC_199 AAFLLLPILVVVWLSLCRWDLLGPIE--FVGLDNWRSVLT-DGTFGHSLL
Mflv_3852|M.gilvum_PYR-GCK LLVTAYPLGYALVLSLYNFRLTDPEGRSFVGLGNYLVILT-DPIWWNDFV
Mvan_2543|M.vanbaalenii_PYR-1 LLVTAYPLGYALVLSLYNFRLTDPEGRSFVGLSNYLVILT-DPLWWNDFV
TH_2010|M.thermoresistible__bu IIVTQVPFLFTLYFSTLSWNLVRPGSREFVGFQNYVDVVQ-DSTFWQVAV
. *. : :* : :* : *: : * :
MMAR_3013|M.marinum_M NSVVYTAGTVVPTVLISLVVAAVLNRKVPGIGVFRTIVFLPLAISSVVMA
MUL_2254|M.ulcerans_Agy99 NSVVYTAGTVVPTVLISLVVAAVLNRKVPGIGVFRTIVFLPLAISSVVMA
Mb2066c|M.bovis_AF2122/97 NTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA
Rv2040c|M.tuberculosis_H37Rv NTAVYTVGTVVPTVIVSLVVAAFLNRKIKGISLFRTVVFLPLAISSVVMA
MLBr_01426|M.leprae_Br4923 NSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMA
MAV_2477|M.avium_104 NTVIFTLGSVVPTVAISLAVAGVLNQKVRGIGIFRTIVFLPLAISSVVMA
MSMEG_0516|M.smegmatis_MC2_155 HTIIYTALFVPGTMIVGLLVAAALNRSVRFISVYRTAAYVTMAVSTISQG
MAB_1717c|M.abscessus_ATCC_199 VTLLFVALVIPVQTALGLAAATLLVRGLPGTVLFRTIYVIPWICAPLAIG
Mflv_3852|M.gilvum_PYR-GCK TTLAITVVTVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSA
Mvan_2543|M.vanbaalenii_PYR-1 TTLAITVVTVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSA
TH_2010|M.thermoresistible__bu NSVLIIVVTVLVSVLLGLGLALLLDRVFLGRGIVRTLLITPFLVTPVAGA
: : :.: * : : . ** . .: .
MMAR_3013|M.marinum_M VVWQ-FVFDTNNGLLNIILGWIGVGPVPWLIEPRWAMVSLCLVSVWRSVP
MUL_2254|M.ulcerans_Agy99 VVWQ-FVFDTNNGLLNIILGWIGVGPVPWLIEPRWAMVSLCLVSVWRSVP
Mb2066c|M.bovis_AF2122/97 VVWQ-FVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVP
Rv2040c|M.tuberculosis_H37Rv VVWQ-FVFNTDNGLLNIMLGWLGIGPIPWLIEPRWAMVSLCLVSVWRSVP
MLBr_01426|M.leprae_Br4923 VVWQ-FIFNTHNGLLNIMLGWIGIGPIPWLVNPGWAMASLCIVSVWRSVP
MAV_2477|M.avium_104 VVWQ-FVFNTDNGLLNIMLGWVGLGPVPWLVEPRWAMASLCIVSVWRSVP
MSMEG_0516|M.smegmatis_MC2_155 IIFL-WLTDRDYGLVNAALNTVGISSQPFLASPSQALYVIVAMTIWGWTG
MAB_1717c|M.abscessus_ATCC_199 VLWH-WMLAPTDGAVNALLGQR----VEWLTDPSLALPVVAAVSVWTNVG
Mflv_3852|M.gilvum_PYR-GCK FIWR-YAFAIDSGFVNQWLNLT---DFDWFGDRWSAIFVICLSEIWKTTP
Mvan_2543|M.vanbaalenii_PYR-1 FIWR-YAFAIDSGFVNQWLNLT---EFDWFGDRWSAIFVICLSEIWKTTP
TH_2010|M.thermoresistible__bu LMWKTAMLDPVFGIVNWLLSPFGVHQVDWVS--RFPLTSVMINLVWQWTP
.:: * :* *. :. .: : :* .
MMAR_3013|M.marinum_M FATVVLLAAMQGVPETVYEAAKIDGAGEIRQFVSITVPLIRGAMSFVVVI
MUL_2254|M.ulcerans_Agy99 FATVVLLAAMQGVPETVYEAAKIDGAGEIRQFVSITVPLIGGVMSFVVVI
Mb2066c|M.bovis_AF2122/97 FATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVI
Rv2040c|M.tuberculosis_H37Rv FATVVLLAAMQGVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVI
MLBr_01426|M.leprae_Br4923 FATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVI
MAV_2477|M.avium_104 FATVVLLAAMQGVPETVYEAARIDGAGEIRQFFAITVPLIRGSISFVVII
MSMEG_0516|M.smegmatis_MC2_155 FSVIVYLAALQGVPAELHEAAAIDGASAFTRFRTITVPLLGPANIFLVVW
MAB_1717c|M.abscessus_ATCC_199 YVALFFMAGLLAIPGDVHNAARVDGATAWQRFRRITLPMLRPTFFFVLVT
Mflv_3852|M.gilvum_PYR-GCK FISLLLLAGLVQVPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLF
Mvan_2543|M.vanbaalenii_PYR-1 FISLLLLAGLVQVPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLF
TH_2010|M.thermoresistible__bu FMMLLILAGLQSMPRDILEAGRVDGAGTFQLFRELTLPHLRRFIELGAVL
: :. :*.: :* : :*. :*** : :*:* : . :
MMAR_3013|M.marinum_M SIIHAFQAFDLVYVLTGPNGGPETGTYVLGIMLFQHAFSFLEFGYASALA
MUL_2254|M.ulcerans_Agy99 SIIHAFQAFDLVYVLTGPNGGPETGTYVLGIMLFQHAFSFLEFGYASALA
Mb2066c|M.bovis_AF2122/97 SIIHAFQAFDLVYVLTGANGGPETATYVLGIMLFQHAFSFLEFGYASALA
Rv2040c|M.tuberculosis_H37Rv SIIHAFQAFDLVYVLTGANGGPETATYVLGIMLFQHAFSFLEFGYASALA
MLBr_01426|M.leprae_Br4923 SFIHAFQTFDLVYVLNGPNGGPELATYVLGIMLFQHAFSFLEFGYASALA
MAV_2477|M.avium_104 SIIHAFQAFDMVYVLTGPSGGPESATYVLGIMLFQHAFSFLEFGYASALA
MSMEG_0516|M.smegmatis_MC2_155 LTINALQLFDEVYATTR--GGPLRATTVIVYYLWDRAFVQFDAGYAAAMA
MAB_1717c|M.abscessus_ATCC_199 GVVSAVQTFDTVYALTS--GGPQNRTDLAAHRVYAEAFEAAHVGRSAAMS
Mflv_3852|M.gilvum_PYR-GCK RTLDAWRIFDNPYVMTAG----ANNTETISFLAYRQNVTLVNLGMGSAVS
Mvan_2543|M.vanbaalenii_PYR-1 RTLDAWRIFDNPYVMTAG----ANNTETISFLAYRQNVTLVNLGMGSAVS
TH_2010|M.thermoresistible__bu GAIYLVNTFDPIYMMTQ--GGPGTASSNLPFYIYQRAFLGFDIGQAAAMG
: . ** * . : : . . . * .:*:.
MMAR_3013|M.marinum_M WVIFAILLVLTVLQLRITRRRSWEASSGLS
MUL_2254|M.ulcerans_Agy99 WVIFAILLVLTVLQLRITRRRSWEASSGLS
Mb2066c|M.bovis_AF2122/97 WVMFAILLVLTVLQLRITHRRSWEASRGLG
Rv2040c|M.tuberculosis_H37Rv WVMFAILLVLTVLQLRITHRRSWEASRGLG
MLBr_01426|M.leprae_Br4923 LVTFAILLVLIVLQLLLNRRHSWEVSGGLS
MAV_2477|M.avium_104 WVMFAVLLVLTVVQLRVSHRRSLETSRGLK
MSMEG_0516|M.smegmatis_MC2_155 YVLFVVILVITAVQFRLARRYVHT------
MAB_1717c|M.abscessus_ATCC_199 LILFLILVTITVIQHRYFRARVSYDLV---
Mflv_3852|M.gilvum_PYR-GCK VLLFLSVVAIAWIFIKVFKTDLSQVRGDQ-
Mvan_2543|M.vanbaalenii_PYR-1 VLLFLSVVGIAWIFIKVFKTDLSQVRGDQ-
TH_2010|M.thermoresistible__bu VIVVIFTIIIATFALRLIFRSFTGKEEAA-
: . : : .