For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGKNWIVGDRSAVAAELIYDAAAELIASDGLSAFDIDKLAARVHCSRATIYRYAGGKAKIRDVVIARAAA RIVESVRAQAESLTGAERVVASVEFALAGVRSDPLGRHLVGSFPKSANGAEWFVGSKLVANFAADLAGIT GGDHQAGGWLVRVVLSLILWPAEDAEIERQLVHRFIGPAFGHESGLDANNSRVAEAAS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2655 | - | - | 100% (199) | transcriptional regulatory protein |
M. marinum M | MMAR_2651 | - | 3e-49 | 50.56% (178) | transcriptional regulatory protein |
M. marinum M | MMAR_4185 | - | 2e-15 | 27.96% (186) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1805c | - | 9e-54 | 56.52% (184) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_3474 | - | 1e-36 | 44.75% (181) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1776c | - | 1e-53 | 56.52% (184) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1938c | - | 7e-26 | 31.63% (196) | TetR family transcriptional regulator |
M. avium 104 | MAV_0009 | - | 1e-38 | 48.90% (182) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0676 | - | 9e-45 | 53.93% (178) | putative transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_0937 | - | 4e-43 | 49.45% (182) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. ulcerans Agy99 | MUL_3128 | - | 1e-49 | 51.12% (178) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_3780 | - | 2e-41 | 47.98% (173) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb1805c|M.bovis_AF2122/97 ----------MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDK Rv1776c|M.tuberculosis_H37Rv ----------MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDK MUL_3128|M.ulcerans_Agy99 ----------MPNDDWLVGGDRRRAAADRIYDAATDLIAHEGINQLDIDR MMAR_2655|M.marinum_M ----------MAGKNWIVG-DRSAVAAELIYDAAAELIASDGLSAFDIDK MSMEG_0676|M.smegmatis_MC2_155 ------------MADWLLGGDRRTAAAERIYAAATELVLRDGLDAFDIDT TH_0937|M.thermoresistible__bu ----------VARTDWLVG-DRHDAAAERIYAAATELVLRRGLDALDVDT Mflv_3474|M.gilvum_PYR-GCK MSSPRAGDRPKATPDWLIGRDRRSEGAERIYVAAADLMARRGYDGFGIDA MAV_0009|M.avium_104 ----------MARDDWLVGRDRRSAAAERIYAAAADLIARRGYDGFTIEA Mvan_3780|M.vanbaalenii_PYR-1 -----------MRDDWLVG-DRRAEAADRIFSAATDLIVRDGLDGFDMAA MAB_1938c|M.abscessus_ATCC_199 ---------MSPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDA :*: * :* .*: * .*:. : * . : : Mb1805c|M.bovis_AF2122/97 LAREVHCSRATIYRRAGGKAQIRDVVLTRAAARIADGVRSDVETLRGRER Rv1776c|M.tuberculosis_H37Rv LAREVHCSRATIYRRAGGKAQIRDVVLTRAAARIADGVRSDVETLRGRER MUL_3128|M.ulcerans_Agy99 LATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSGRER MMAR_2655|M.marinum_M LAARVHCSRATIYRYAGGKAKIRDVVIARAAARIVESVRAQAESLTGAER MSMEG_0676|M.smegmatis_MC2_155 LAARVHCSRATVYRYAGGKAQIRDAVLLRLAASIVDSVRQAVGHLSGRER TH_0937|M.thermoresistible__bu LAARVHCSRATVYRYTGGKAKIRDVVLTRLAAGIVETVRRAVDGLHGQDR Mflv_3474|M.gilvum_PYR-GCK LAAAVHCSPATIYRHVGGKSAIRDVVLERQAEHVLDSVRQAIAGLEGSER MAV_0009|M.avium_104 LAARVHCSPATIYRHAGGKATIRDAVVGIQAARIVDTTREAIKDLRGPER Mvan_3780|M.vanbaalenii_PYR-1 LQAAVHCSRATIYRHVGGKAQIREAVLLRQAERIIATVRSAVVGLSGAER MAB_1938c|M.abscessus_ATCC_199 VAREAGCSRATVYRHVGGKTAIVDAVLARNIAKVTADIQRAVQSADARRR : . ** **:** .*** * :.*: : : . * Mb1805c|M.bovis_AF2122/97 VVAAILLSLQRIRSDPLGKLMFGSIHGGAGELAWLTESPLLADFATELTG Rv1776c|M.tuberculosis_H37Rv VVAAILLSLQRIRSDPLGKLMFGSIHGGAGELAWLTESPLLADFATELTG MUL_3128|M.ulcerans_Agy99 VVAAIILSVQRIRADPLGQLMISSIHGGTQEVAWLADSPLLAGVASDLTG MMAR_2655|M.marinum_M VVASVEFALAGVRSDPLGRHLVGSFPKSANGAEWFVGSKLVANFAADLAG MSMEG_0676|M.smegmatis_MC2_155 VVRAVTVALEHIRSDPIRQMMVG--LGAGRDLSELPASPVLADLAAELTG TH_0937|M.thermoresistible__bu IVTAITVALEQIRSAPLRRVMLT--ADNSPDVGELHESPALSRLAAELTG Mflv_3474|M.gilvum_PYR-GCK IVTATLVALQRMRAAPLAEVMRS--MPGPPGTGWLIDSPVVARLAAEMVG MAV_0009|M.avium_104 VVTATIMALERLRSDPLAQLMRS--IHAAPVSDWVINSPTVTALAAEMLG Mvan_3780|M.vanbaalenii_PYR-1 TVTAVVVALERIRADPIGQTLLS--AMRKDELTWIGRSAVPPALAAELTG MAB_1938c|M.abscessus_ATCC_199 AVVAITASLTAIRHDPVISTMIAT-MSPTSLGSYLNASSEIPRSASAFTG * : :: :* *: : . * . *: : * Mb1805c|M.bovis_AF2122/97 IAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAPAFAEQS---- Rv1776c|M.tuberculosis_H37Rv IAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAPAFAEQS---- MUL_3128|M.ulcerans_Agy99 LAGGDPHAARWVVRVVLSLMYWPAESEDVERLMVEKFVAPVFAE------ MMAR_2655|M.marinum_M ITGGDHQAGGWLVRVVLSLILWPAEDAEIERQLVHRFIGPAFGHESGLDA MSMEG_0676|M.smegmatis_MC2_155 VTD-DPQAAQWIVRVVMSLAVWPIGDAAAEAGLVERFVAPAFE------- TH_0937|M.thermoresistible__bu ITD-DPEAARWIVRVVISMAYWPMADPRLEEQTIRRFVAPAFG------- Mflv_3474|M.gilvum_PYR-GCK TADADPLAAQWLIRVFLALWYWPMHDEEAEKAAVLRFLGPPY-AGAPDDP MAV_0009|M.avium_104 PGHDNPLAAQWLIRVFLALWGWPLKDPAAERALVHRFLGASYRPGGERDS Mvan_3780|M.vanbaalenii_PYR-1 IDDDDPQAAQWIVRVVLALLFWPVEDPAAEREMLQRFLIQRP-------- MAB_1938c|M.abscessus_ATCC_199 LAD--ETAAQWISRVVMALLFWPTSDPAQESEMIERFVYPVLKDATASRV .. *: **.::: ** . * : ::: Mb1805c|M.bovis_AF2122/97 -------------------------- Rv1776c|M.tuberculosis_H37Rv -------------------------- MUL_3128|M.ulcerans_Agy99 -------------------------- MMAR_2655|M.marinum_M NNSRVAEAAS---------------- MSMEG_0676|M.smegmatis_MC2_155 -------------------------- TH_0937|M.thermoresistible__bu -------------------------- Mflv_3474|M.gilvum_PYR-GCK -------------------------- MAV_0009|M.avium_104 ICGA---------------------- Mvan_3780|M.vanbaalenii_PYR-1 -------------------------- MAB_1938c|M.abscessus_ATCC_199 SASATSESTISPARTATFDSSEDDSP