For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLGEASTGGNTDMAGSRELRFSIVIPAHNEEEYIASTLEHASSLSYPTESFEVIVVENGSSDRTLDVARQ FEGRNVRVFTSDTAGVSAAKNFGIDRLSPHSDWVVFLDADTILKPNFLLDLDAQLRASRKTLSVGTTKVL PLGGGRHARAWFACYDLLHRLGGSYAIQIAKRSLFPELRFDEHLIMGEDLLLIKQARKLGKFFYVPTDTV YTSTRRFDTVGYWRLYFQWASFEILPRRLQKRRGYKVIR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2351 | - | - | 100% (249) | glycosyl transferase |
| M. marinum M | MMAR_2333 | wcaA | 3e-05 | 27.27% (121) | glycosyltransferase, WcaA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2981 | - | 2e-07 | 31.82% (110) | glycosyl transferase |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv2957 | - | 2e-07 | 31.82% (110) | glycosyl transferase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0476 | - | 5e-06 | 33.70% (92) | chitin synthase |
| M. thermoresistible (build 8) | TH_3097 | - | 3e-05 | 30.53% (131) | PUTATIVE transferase |
| M. ulcerans Agy99 | MUL_1526 | - | 1e-140 | 98.80% (249) | glycosyl transferase |
| M. vanbaalenii PYR-1 | Mvan_0211 | - | 3e-07 | 31.31% (99) | glycosyl transferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 --------------------------------------------------
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 MTTTDAPGAIAAGPAVMQTPKVSICIPAHQAAAYLQPLLDSVLSQAYDDF
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 --------------------------------------------------
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 EVVVIDNHSTDGTSDILARVDDPRVRVMRNPATLPFVENWNLLVSQSRGE
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 --------------------------------------------------
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 FVKLVCADDLLKPGCLAVQASVLDNNPDVALVSVKCDFIDDNERLIVPAR
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 --------------------------------------------------
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 GLDGIEGQVTAEGVVRRIVRNGGNPIGAPVAGMFRRADFDRVGGFTADFP
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 -----------------------MATIAAADRTVTSVRPAELGVKVVIVM
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 FLSDIHLWVRLLGCGDFYGIPATHASFRIRGGSMSGLTSARTQLAQSLDF
MMAR_2351|M.marinum_M ----------------------------------------MLG----EAS
MUL_1526|M.ulcerans_Agy99 ----------------------------------------MLG----EAS
Mb2981|M.bovis_AF2122/97 ----------------------------------------MVQTKRYAGL
Rv2957|M.tuberculosis_H37Rv ----------------------------------------MVQTKRYAGL
MSMEG_0476|M.smegmatis_MC2_155 ALLLIVMLIFAYKVVSLHN----MKDEPFWAAYGLIITAFIFTRFGLAAL
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 EKSLARDPRWDLSQIDLFRGWMRCHEQTLRRMALFGLTKWRVARRDRGPV
MMAR_2351|M.marinum_M TGGNTD------MAGSRELRFSIVIPAHNEEEYIASTLEHASSLSYPTES
MUL_1526|M.ulcerans_Agy99 TGGNTD------MAGSRELRFSIVIPAHNEEEYIASTLEHASSLSYPTES
Mb2981|M.bovis_AF2122/97 TAANTK------KVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCG--D
Rv2957|M.tuberculosis_H37Rv TAANTK------KVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCG--D
MSMEG_0476|M.smegmatis_MC2_155 YRPPRR------DTGNYWPVVAIIVPAYN-EPDIARTLLHCVGVDYPREL
TH_3097|M.thermoresistible__bu --------------LTASTRLSFVIASRNRAAELASVVNRLLDTTPCP--
Mvan_0211|M.vanbaalenii_PYR-1 RAGPRAGTDLPSTVVADTLTVVICAYTTQRWDELCPAVESVLNQDFP--V
. : : : : :
MMAR_2351|M.marinum_M FEVIVVENGSSDRTLDVARQFE---GRNVRVFTSDTAGVSAAKNFGIDRL
MUL_1526|M.ulcerans_Agy99 FEVIVVENGSSDRTLDVARQFE---GRNVRVFTSDTAGVSAAKNFGIDRL
Mb2981|M.bovis_AF2122/97 FELVLVDGGSTDETLDIANIFAPNLGERLIIHRDTDQGVYDAMNRGVDLA
Rv2957|M.tuberculosis_H37Rv FELVLVDGGSTDETLDIANIFAPNLGERLIIHRDTDQGVYDAMNRGVDLA
MSMEG_0476|M.smegmatis_MC2_155 LRVVVVDDKSSDDTLRRITDFAAEHPNLTVIPHEVNGGKRRAMATGMAAA
TH_3097|M.thermoresistible__bu --VIVVDNASDDHSVDVITRIAARSANRVQVIELDSNRGAVGRNAGVAAS
Mvan_0211|M.vanbaalenii_PYR-1 LGVVVVIDHCPELYRLARDRFGAR-GRVTVLESDGERGLSGARNTGVGAA
:::* . . : : . : . *:
MMAR_2351|M.marinum_M SPHSDWVVFLDADTILKPNFLLDLDAQLRASRKTLSVGTTKVLPLGG---
MUL_1526|M.ulcerans_Agy99 SPHSDWVVFLDADTILKPNFLLDLDAQLRASRKTLSVGTTKVLPLGG---
Mb2981|M.bovis_AF2122/97 T--GTWLLFLGADDSLYEADTLARVAAFIGEHEPSDLVYGDVIMRST---
Rv2957|M.tuberculosis_H37Rv T--GTWLLFLGADDSLYEADTLARVAAFIGEHEPSDLVYGDVIMRST---
MSMEG_0476|M.smegmatis_MC2_155 D-DADLFVFIDSDSQVTRDAIRVIASYFADSSVGAVCGHTDVTNISHNIL
TH_3097|M.thermoresistible__bu R--TPYVAFCDDDSWWEPDALALGVETFDRYPRVGLLAARTTVLPGGR--
Mvan_0211|M.vanbaalenii_PYR-1 R--GDVVAFLDDDAVAEPGWAHALMRHYRDPRVAAVGGYAAPVWPTGARP
. * . *
MMAR_2351|M.marinum_M -GRHARAWFACYDLLHRLGGSYAIQIAKRSLFPELR--------------
MUL_1526|M.ulcerans_Agy99 -GRHARAWFACYDLLHRLGGSYAIQIAKRWLFPELR--------------
Mb2981|M.bovis_AF2122/97 -NFRWGGAFDLDRLLFKRNICHQAIFYRRGLFGTIGPYNLR----YRVLA
Rv2957|M.tuberculosis_H37Rv -NFRWGGAFDLDRLLFKRNICHQAIFYRRGLFGTIGPYNLR----YRVLA
MSMEG_0476|M.smegmatis_MC2_155 TRMQAMQYYIAFRIYKSAEALFGSVTCCSGCFSAYRADAVRPVADKWLNQ
TH_3097|M.thermoresistible__bu -IDPFSIELARSPLGHRPDLPGPSILGFMSCAAMVR--------------
Mvan_0211|M.vanbaalenii_PYR-1 HWMPAEFDWVVGCSYTGQPTELAEVRNPLGCNMSIRRSVFDDIGGFRSEV
MMAR_2351|M.marinum_M --------FDEHLIMGEDLL------------------------------
MUL_1526|M.ulcerans_Agy99 --------FDEHLIIGEYLL------------------------------
Mb2981|M.bovis_AF2122/97 DWDFNIRCFSNPALVTRYMH------------------------------
Rv2957|M.tuberculosis_H37Rv DWDFNIRCFSNPALVTRYMH------------------------------
MSMEG_0476|M.smegmatis_MC2_155 TFLGRPSTFGDDRSLTNYLLRDWRVLYAPDAQAYTNVPEHLKQFLRQQLR
TH_3097|M.thermoresistible__bu -----TAAFQAAGGFSDILH------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 GRVGNHPVGGEETELCLRIRG-----------------------------
. :
MMAR_2351|M.marinum_M --------------------------------------------------
MUL_1526|M.ulcerans_Agy99 --------------------------------------------------
Mb2981|M.bovis_AF2122/97 --------------------------------------------------
Rv2957|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_0476|M.smegmatis_MC2_155 WKKSWLREAPRAMCAVRRKNPVMVVMFALSIVLPLIAPQVVMRAFVVQPH
TH_3097|M.thermoresistible__bu --------------------------------------------------
Mvan_0211|M.vanbaalenii_PYR-1 -------------------RQPDARVLYDPDAVVRHHVSCDRTTIRYFRR
MMAR_2351|M.marinum_M -LIKQAR-KLGKFFYVPTDT-VYTS----TRRFDTVGYWRLYF------Q
MUL_1526|M.ulcerans_Agy99 -LIKQAR-KLGKFFYVPTDT-VYTS----TRRFDTVGYWRLYF------Q
Mb2981|M.bovis_AF2122/97 -VVVASYNEFGGLSNTIVDK-EFLKRLPMSTRLGIRLVIVLVR------R
Rv2957|M.tuberculosis_H37Rv -VVVASYNEFGGLSNTIVDK-EFLKRLPMSTRLGIRLVIVLVR------R
MSMEG_0476|M.smegmatis_MC2_155 FISQLPFWYFGGVAAIAVIYGLFYRLHRPVKRWYQGIFFTMFY------T
TH_3097|M.thermoresistible__bu ---FRGEEQLLALDMAALGWELCYLAELLAVHQPSSVRATTXX------X
Mvan_0211|M.vanbaalenii_PYR-1 RCYHEGISKAVVTEIAGVGNPLLAERAYTTRTLPRGVLRELTAPRQGGFR
MMAR_2351|M.marinum_M WASFEILPRRLQKRRGYKVIR-----
MUL_1526|M.ulcerans_Agy99 WASFEILPRRLQKRRGYKVIR-----
Mb2981|M.bovis_AF2122/97 WPKVISRAMVMRTVISWRRRR-----
Rv2957|M.tuberculosis_H37Rv WPKVISRAMVMRTVISWRRRR-----
MSMEG_0476|M.smegmatis_MC2_155 IILVLQMPYAMVTIRDSKWGTR----
TH_3097|M.thermoresistible__bu APRSLWWPKRSPWRRCRRRRIR----
Mvan_0211|M.vanbaalenii_PYR-1 RAGVMAFGLAATTAGYLRAKTQYRLS
: