For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSANRVSAESLLAQAGGVSGLVYSSVPVVIFVAVSSIGGLLPAIGSALAAAGLVLLLRLIRRESTQPAVS GFFGVAGCALVAYLVGQSKGYFLLGIWMSLLWAVVFALSIVVRRPVVGFLWSWTSGRDQGWREVPRAVYA FDVATLGWTLVFAARFIVQRLLYDADKTGWLGVARIGMGWPLTAVAALATYAAIKAARRAMPAADEPEAA EVAAVDTEACREL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2021 | - | - | 100% (223) | integral membrane alanine and leucine rich protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2712c | - | 1e-93 | 76.68% (223) | integral membrane alanine and leucine rich protein |
| M. gilvum PYR-GCK | Mflv_3929 | - | 1e-73 | 64.88% (205) | hypothetical protein Mflv_3929 |
| M. tuberculosis H37Rv | Rv2693c | - | 1e-93 | 76.68% (223) | integral membrane alanine and leucine rich protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2996c | - | 6e-61 | 55.44% (193) | hypothetical protein MAB_2996c |
| M. avium 104 | MAV_3584 | - | 3e-85 | 71.22% (205) | hypothetical protein MAV_3584 |
| M. smegmatis MC2 155 | MSMEG_2770 | - | 1e-71 | 65.10% (192) | integral membrane alanine and leucine rich protein |
| M. thermoresistible (build 8) | TH_2214 | - | 3e-75 | 66.84% (196) | PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND LEUCINE RICH |
| M. ulcerans Agy99 | MUL_3331 | - | 1e-123 | 99.55% (223) | integral membrane alanine and leucine rich protein |
| M. vanbaalenii PYR-1 | Mvan_2471 | - | 2e-75 | 65.22% (207) | hypothetical protein Mvan_2471 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2021|M.marinum_M --------------------------------MSANRVSAESLLAQAGGV
MUL_3331|M.ulcerans_Agy99 --------------------------------MSANRVSAESLLAQVGGV
Mb2712c|M.bovis_AF2122/97 --------------------------------MNANRTSAQRLLAQAGGV
Rv2693c|M.tuberculosis_H37Rv --------------------------------MNANRTSAQRLLAQAGGV
MAV_3584|M.avium_104 --------------------------------MTANRINPERLLAQAGGV
Mflv_3929|M.gilvum_PYR-GCK ----------------------------------------------MGGI
Mvan_2471|M.vanbaalenii_PYR-1 ----------------MSDPGT-----DPGKQQTSPARG-AAVLEQMGGI
MSMEG_2770|M.smegmatis_MC2_155 ----------------MTQADNSPLPESAGEAEVPRARGGRAVLEQMGGI
TH_2214|M.thermoresistible__bu ------------VNPAADESETRTGDQPPEKATDERSVGAHTMLEQMGGF
MAB_2996c|M.abscessus_ATCC_199 MPETPSHEPDGSGGLDAHEGPHLKISVPGTKPEEPGSSPLHEMWHQAGGW
**
MMAR_2021|M.marinum_M SGLVYSSVPVVIFVAVSSIGGLLPAIGSALAAAGLVLLLRLIRRESTQPA
MUL_3331|M.ulcerans_Agy99 SGLVYSSVPVVIFVAVSSIGGLLPAIGSALAAAGLVLLLRLIRRESTQPA
Mb2712c|M.bovis_AF2122/97 SGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPV
Rv2693c|M.tuberculosis_H37Rv SGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPV
MAV_3584|M.avium_104 SGVIYSSLPVVVFVIASSVSGLVAAIAAALGVAALVLLWRLVRRDSPQPA
Mflv_3929|M.gilvum_PYR-GCK SGLIYSSLPVVVFVPVSSAFGLLPAIAAALGVATLILIWRLVRRETAQPA
Mvan_2471|M.vanbaalenii_PYR-1 SGLIYSSLPVVVFVPISSAFGLIPAIGAALGVATLILIWRLARKESAQPA
MSMEG_2770|M.smegmatis_MC2_155 SGLIYSSLPVVVFVPVSSLFGLTAAIASALAVATLILIWRLIRRDSVQPA
TH_2214|M.thermoresistible__bu SGLIYSSLPVVAFVPISNMFGLTSAIVAALGTAAAILVWRLIRRESAQPA
MAB_2996c|M.abscessus_ATCC_199 QGIVYSSIPVIVFVVAVSVSSLIPAIISALVAATLVLIWRLVRRESVQPA
.*::***:**: ** . .* .** ** * :*: ** *::: :*.
MMAR_2021|M.marinum_M VSGFFGVAGCALVAYLVGQSKGYFLLGIWMSLLWAVVFALSIVVRRPVVG
MUL_3331|M.ulcerans_Agy99 VSGFFGVAGCALVAYLVGQSKGYFLLGIWMSLLWAVVFALSIVVRRPVVG
Mb2712c|M.bovis_AF2122/97 VAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVG
Rv2693c|M.tuberculosis_H37Rv VAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVG
MAV_3584|M.avium_104 ISGFFGVALCALIAYVVGESKGYFLLGIWMSLLWAVVVAASVLIRRPLVG
Mflv_3929|M.gilvum_PYR-GCK ISGFFAVGISALIAYLVGASKGYFLLGIWMSLFWAVVFALSVVIRRPVVG
Mvan_2471|M.vanbaalenii_PYR-1 ISGFFAVGISALIAYLVGASKGYFLLGIWMSLFWAVVFTLSIVIRRPVVG
MSMEG_2770|M.smegmatis_MC2_155 ISGFFAVGVSALIAYMVGESKGYFLLGIWSSLIYAVVFGISVLIRRPVVG
TH_2214|M.thermoresistible__bu ISGFFGVGVCVLIAYLMGESKGYFLLGIWMSLLWAAVFGVSVLIRRPVVG
MAB_2996c|M.abscessus_ATCC_199 VSGFISVGISALIAYLLGEAKGYFLIGIWANFFWGTVFLVSVIIRRPIVG
::** .*. ..*:**::* :*****:*** .:::..*. *:::***:**
MMAR_2021|M.marinum_M FLWSWTSGRDQGWREVPRAVYAFDVATLGWTLVFAARFIVQRLLYDADKT
MUL_3331|M.ulcerans_Agy99 FLWSWTSGRDQGWREVPRAVYAFDVATLGWTLVFAARFIVQRLLYDADKT
Mb2712c|M.bovis_AF2122/97 YLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKT
Rv2693c|M.tuberculosis_H37Rv YLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKT
MAV_3584|M.avium_104 YAWSWAGGRGDGWRSVPRAVYAFDVASLCWVLVFAARFVVQGLLYDADRT
Mflv_3929|M.gilvum_PYR-GCK YIWGWVNTHDRRWREVRRAVLAFDLATLVWVAVFTSRFVVQHHLYDADQT
Mvan_2471|M.vanbaalenii_PYR-1 YIWAWVHANDRRWREARRAVLAFDAATLVWVAVFTSRFVVQHHLYDADQT
MSMEG_2770|M.smegmatis_MC2_155 YIWGWVHTDDAGWRDVRKAVRAFDIATLTWVAVFGSRFVVQNHLYDADET
TH_2214|M.thermoresistible__bu YLWGWLSGHGAHWRGVRRAVLAFDIATLTWVLVFSSRFLVQRYLYDADET
MAB_2996c|M.abscessus_ATCC_199 YAYSWATGGDMSWRGNRRIVTAFDIATVSWIVLFAVRFVVQEWLYLAGNT
: :.* . ** : * *** *:: * :* **:** ** *..*
MMAR_2021|M.marinum_M GWLGVARIGMGWPLTAVAALATYAAIKAARRAMPAADEPEAA-EVAAVDT
MUL_3331|M.ulcerans_Agy99 GWLGVARIGMGWPLTAVAALATYAAIKAARRAMPAADEPEAA-EVAAVDT
Mb2712c|M.bovis_AF2122/97 GWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDA
Rv2693c|M.tuberculosis_H37Rv GWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDA
MAV_3584|M.avium_104 GWLAAARIGMGWPLTVLAALATYAAIKSAQRAIAAVELASGAAGE-----
Mflv_3929|M.gilvum_PYR-GCK GWLGVARIAMGWPLTAVAALVTYLAIRRAQRYVREAGLGDTDTDAR---S
Mvan_2471|M.vanbaalenii_PYR-1 GWLGVARIAMGWPLTAVAALVTYLAIRAAQRALHERGLNEPADTAHGDDV
MSMEG_2770|M.smegmatis_MC2_155 TWLGVARIAMGWPLTAVAALVTYLAIRSAQRAVREHQAARHIDAATGSGS
TH_2214|M.thermoresistible__bu GWLGVARIAMGWPLTAVAALVTYLAIRTAQRALEHHRAAGGAPASG----
MAB_2996c|M.abscessus_ATCC_199 AWLGGAKIAMGWPLTAVGALVTLLVIRYVRRHTDQAEDRAPESEPPA---
**. *:*.******.:.**.* .*: .:*
MMAR_2021|M.marinum_M EACREL-------
MUL_3331|M.ulcerans_Agy99 EACREL-------
Mb2712c|M.bovis_AF2122/97 DAGRE--------
Rv2693c|M.tuberculosis_H37Rv DAGRE--------
MAV_3584|M.avium_104 -------------
Mflv_3929|M.gilvum_PYR-GCK VSAAED-------
Mvan_2471|M.vanbaalenii_PYR-1 HDAAQEPT-----
MSMEG_2770|M.smegmatis_MC2_155 EPAAESGAEPHAG
TH_2214|M.thermoresistible__bu -------------
MAB_2996c|M.abscessus_ATCC_199 -------------