For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ALMAEPVPASDKTAALDGDKTAAVPSPAPTDTVETAWSREQDVSDVRDPGPDLPDVPDIPDGRGEELAAE PASLVQSWRTTLARAAALLLLGLGFAAVIVIGGWALSTESSPGKASKPRSVTQIAPTPTSAPTTTTTIAS TPEQDSAYIAALNDRGISFANPNAAIYNGKLVCENFRRGLTVDEIVAAFRSSNPALSNHAGDYVDISMRT YCP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1570 | - | - | 100% (214) | hypothetical protein MMAR_1570 |
M. marinum M | MMAR_5261 | - | 4e-10 | 26.73% (202) | hypothetical protein MMAR_5261 |
M. marinum M | MMAR_1233 | - | 7e-07 | 32.05% (78) | hypothetical protein MMAR_1233 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3094 | - | 6e-25 | 43.41% (129) | hypothetical protein Mb3094 |
M. gilvum PYR-GCK | Mflv_5185 | - | 7e-07 | 34.21% (76) | hypothetical protein Mflv_5185 |
M. tuberculosis H37Rv | Rv3067 | - | 6e-25 | 43.41% (129) | hypothetical protein Rv3067 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_4271 | - | 9e-12 | 32.71% (107) | hypothetical protein MAV_4271 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3463 | - | 1e-118 | 98.60% (214) | hypothetical protein MUL_3463 |
M. vanbaalenii PYR-1 | Mvan_1127 | - | 6e-08 | 31.91% (94) | hypothetical protein Mvan_1127 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1570|M.marinum_M MALMAEPVPASDKTAALDGDKTAAVPSPAPTDTVETAWSREQDVSDVRDP MUL_3463|M.ulcerans_Agy99 MALMAEPVPASDKTAALDGDKTAAVPSPAATDTVETAWSREQDVSDVRDP Mb3094|M.bovis_AF2122/97 -------------------------------------------------- Rv3067|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_5185|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1127|M.vanbaalenii_PYR-1 -------------------------------------------------- MAV_4271|M.avium_104 -------------------------------------------------- MMAR_1570|M.marinum_M GPDLPDVPDIPDGRGEELAAEPASLVQSWRTTLARAAALLLLGLGFAAVI MUL_3463|M.ulcerans_Agy99 GPDLPDVPDIPDGRGEELAAEPASLVQSWRTTLARAAALLLLGLGFAAVI Mb3094|M.bovis_AF2122/97 --------------------------------------MLTVGVGIGAAI Rv3067|M.tuberculosis_H37Rv --------------------------------------MLTVGVGIGAAI Mflv_5185|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1127|M.vanbaalenii_PYR-1 --------------------------------MPDRHSVLRARTAVDVFA MAV_4271|M.avium_104 -------------------------------------------------- MMAR_1570|M.marinum_M VIGGWALSTESSPGKASKPRSVTQIAPTPTSAPTTTTTIASTPEQDSAYI MUL_3463|M.ulcerans_Agy99 VIGGWALSTESSPGKASKPRSVTQIAPTPTAAPTTTTTIASTPEQDSAYI Mb3094|M.bovis_AF2122/97 LLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSVFL Rv3067|M.tuberculosis_H37Rv LLGWFTLAHRHPDQPGAAATPPPAGLTTRSAPTAAPPSTLQSPDLDSVFL Mflv_5185|M.gilvum_PYR-GCK -----------------MFARRAASAGIAAVAAVGLAAPASASPEVAVFL Mvan_1127|M.vanbaalenii_PYR-1 EVRFGLQRLDPPGIDMTTLTRLSAIAAMAAAAAVALAASAAAAPQDAVFL MAV_4271|M.avium_104 ------MTSTQIRKRARPRSLVVAGLLPLAGLLGVITTPAYATSADDAFL : .: :. .:: MMAR_1570|M.marinum_M AALNDRGISFANPNAAIYNGKLVCENFRRGLTVDEIVAAFRSSNPALS-N MUL_3463|M.ulcerans_Agy99 AALNDRGISFANPNAAIYNGKLVCENFRRGLTVDEIVAAFRSSNPALS-N Mb3094|M.bovis_AF2122/97 GNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-D Rv3067|M.tuberculosis_H37Rv GNLHDRGISFTNPDAAVYNGKMVCTNLGGGMTVQQVVEALQSSSPALG-D Mflv_5185|M.gilvum_PYR-GCK DRLQKVGITSSNPYATIYDAYAVCRELDRGTSPTQVVGFVLGDNPDLDWE Mvan_1127|M.vanbaalenii_PYR-1 DRLQKVGITSSNPYATVHGGYDVCRQLDLGTPHSQIVGFVLSDNPDLDWD MAV_4271|M.avium_104 AALKAKGINYESPDAAVNSGHTVCHELDMGQTPEQVANNVLSSS-TLDSY *: **. .* *:: .. ** :: * . ::. . ... *. MMAR_1570|M.marinum_M HAGDYVDISMRTYCP---------- MUL_3463|M.ulcerans_Agy99 HARDYVDISMRTYCP---------- Mb3094|M.bovis_AF2122/97 RTTAYVAVSIRTYCPKYDAVLPPGS Rv3067|M.tuberculosis_H37Rv RTTAYVAVSIRTYCPKYDAVLPPGS Mflv_5185|M.gilvum_PYR-GCK AAADYVVLANMTYCPPV-------- Mvan_1127|M.vanbaalenii_PYR-1 SAADYVVLANMTYCPPV-------- MAV_4271|M.avium_104 HAGYFVGVSIKAYCPKYAAAAAGS- : :* :: :***