For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1006 (mmpS5)

annotation: transmembrane proteinm, MmpS5
coordinates: 1233255 - 1233683
length: 142

IGILKRAWIPLLILVVVAIAGFTVQRIRTFFGADGILVTPKVFANDPEPYDPKVVKYEISGSGSYANINY
LDLDAKPQRIDGASLPWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVVKDERTATGVDALTYCFVKS
A*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1006mmpS5-100% (142)transmembrane proteinm, MmpS5
M. marinum MMMAR_3267-1e-3753.49% (129) transmembrane protein
M. marinum MMMAR_0774-1e-3548.95% (143) hypothetical protein MMAR_0774

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0696cmmpS51e-7088.73% (142) hypothetical protein Mb0696c
M. gilvum PYR-GCKMflv_3434-5e-5770.42% (142) membrane family protein
M. tuberculosis H37RvRv0677cmmpS51e-7088.73% (142) hypothetical protein Rv0677c
M. leprae Br4923MLBr_02377-1e-3347.86% (140) hypothetical protein MLBr_02377
M. abscessus ATCC 19977MAB_4383c-1e-3853.52% (142) putative membrane protein, MmpS
M. avium 104MAV_2511-3e-4356.03% (141) MmpS5 protein
M. smegmatis MC2 155MSMEG_0226-1e-4664.79% (142) MmpS5 protein
M. thermoresistible (build 8)TH_0185mmpS52e-4358.04% (143) POSSIBLE CONSERVED MEMBRANE PROTEIN MMPS5
M. ulcerans Agy99MUL_0758mmpS53e-78100.00% (142) transmembrane proteinm, MmpS5
M. vanbaalenii PYR-1Mvan_3188-1e-5973.24% (142) hypothetical protein Mvan_3188

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1006|M.marinum_M               -----------MIGILKRAWIPLLILVVVAIAGFTVQRIRTFFGA--DGI
MUL_0758|M.ulcerans_Agy99           -----------MIGILKRAWIPLLILVVVAIAGFTVQRIRTFFGA--DGI
Mb0696c|M.bovis_AF2122/97           -----------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGS--EGI
Rv0677c|M.tuberculosis_H37Rv        -----------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGS--EGI
Mflv_3434|M.gilvum_PYR-GCK          -----------MIAIGKKVWLPLLIVVVVVIAGATVSRIRTFFGS--EGI
Mvan_3188|M.vanbaalenii_PYR-1       -----------MIAIAKKVWLPLLIVVVVAIAGLTVARIRTFFGA--EGI
TH_0185|M.thermoresistible__bu      -----------MIKTLRRFWMPLLIAAVVAVGAFAVDRVRQIFAA--ESH
MSMEG_0226|M.smegmatis_MC2_155      ------------MKLLKRFWIPLLIGVVVLVGAFTVMRVRTFFGS--GDD
MAB_4383c|M.abscessus_ATCC_199      -----------MIRVAKRVWLPMLVVAAVAIGSITVMHLRTNFGA--TPF
MAV_2511|M.avium_104                ---------MQISRLVRNAWLPLLIVAVVLVGGFAVVRVKSFFGAHDTGI
MLBr_02377|M.leprae_Br4923          MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFAS--EKR
                                                     . *:*::: ..: :.. .* :::  *.:     

MMAR_1006|M.marinum_M               LVTPKVFANDPEPYDPKVVKYEISGS-GSYANINYLDLDAKPQRIDGASL
MUL_0758|M.ulcerans_Agy99           LVTPKVFANDPEPYDPKVVKYEISGS-GSYANINYLDLDAKPQRIDGASL
Mb0696c|M.bovis_AF2122/97           LVTPKVFADDPEPFDPKVVEYEVSGS-GSYVNINYLDLDAKPQRIDGAAL
Rv0677c|M.tuberculosis_H37Rv        LVTPKVFADDPEPFDPKVVEYEVSGS-GSYVNINYLDLDAKPQRIDGAAL
Mflv_3434|M.gilvum_PYR-GCK          IETPRNFADLPEPFDPKVVRYEIIGN-GSYADVNYLDLDAKPQRVDGAAL
Mvan_3188|M.vanbaalenii_PYR-1       IETPRNFADLPEPFDPKVVRYEITGS-GSYADVNYLDLDAKPQRVDGAAL
TH_0185|M.thermoresistible__bu      IVTPIVFADDPEPFDPKVVTYEIFGTPGAVVDINYLDLDARTQRVNDVTL
MSMEG_0226|M.smegmatis_MC2_155      PSLASAKVDDTKPFDPKVVIYEIYGEPGATADVNYLDLDAQPQRVDGVSL
MAB_4383c|M.abscessus_ATCC_199      VVTPRN-SDTAERFNPKVVTYEVFGS-AATAVINYRDLNAIPQRVSEVPL
MAV_2511|M.avium_104                LTSPR--LDDSKPFKPKVVKYEVFGS-ASQANVNYLDLSADPKRVDGAPL
MLBr_02377|M.leprae_Br4923          ESYADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQL
                                       .    . .: :.** : **: *  .: . :.* * .: .:*:. . *

MMAR_1006|M.marinum_M               PWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVVKDERTATGVDALTY
MUL_0758|M.ulcerans_Agy99           PWSLTLQTTAPSAAPNILAQGNGSSISCRIIVDDVVKDERTATGVDALTY
Mb0696c|M.bovis_AF2122/97           PWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDALTY
Rv0677c|M.tuberculosis_H37Rv        PWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDALTY
Mflv_3434|M.gilvum_PYR-GCK          PWSLTLETTEPSAAPNIVAQGDSSTITCRIFVDDELKDERTTDGLNAQTF
Mvan_3188|M.vanbaalenii_PYR-1       PWSLTLETTEPSAAPNIVAQGDGSTITCRIFVDDELKDERTTDGLNAQTF
TH_0185|M.thermoresistible__bu      PWSITLSTTAPSALAHIVAQGNADHIGCRIIVDGELRVESVSTGVNAQTY
MSMEG_0226|M.smegmatis_MC2_155      PWTLTLSTTAPSVFPNIVAQGNGDSITCRITVDDELKDERTSNGVNAQTF
MAB_4383c|M.abscessus_ATCC_199      PWSLTLSTTLPSVMPTLFAQGDGQDIGCRITVDNDVKDERVVTGVNAETY
MAV_2511|M.avium_104                PWTLVLSTTAPSVFPNLSAQSDGNTLGCRITIDDEVKDENITHGVHALTF
MLBr_02377|M.leprae_Br4923          PWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTY
                                    **:: : ** .:.   : **.:   : *** :*. :: *     :.* *:

MMAR_1006|M.marinum_M               CFVKSA
MUL_0758|M.ulcerans_Agy99           CFVKSA
Mb0696c|M.bovis_AF2122/97           CFVKSA
Rv0677c|M.tuberculosis_H37Rv        CFVKSA
Mflv_3434|M.gilvum_PYR-GCK          CFVKSA
Mvan_3188|M.vanbaalenii_PYR-1       CFVKSA
TH_0185|M.thermoresistible__bu      CIEKSA
MSMEG_0226|M.smegmatis_MC2_155      CLVKSA
MAB_4383c|M.abscessus_ATCC_199      CLVKAA
MAV_2511|M.avium_104                CLVKSA
MLBr_02377|M.leprae_Br4923          CLVKSA
                                    *: *:*