For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGDHEVAHLAGGHLAGTDSHLESPTYLQKRQLRTGSAGWLLLAGLGVSYVISGDYSGWNFGLARGGFGGL AIAAVVIAAMYLALVLSMAELSSALPAAGGGYTFARRALGPWGGFATGTAVLIEYSIAPAAIATFIGAYV QSLGLFGIRNGWWVYLTIYALFIGIHLSGVGEALKVMFIITGVALVGLVVFAIAAVGHFRLANLVDITPS DAVGASAFLPHGYLGVWSALPFAIWFFLAVEGVPLAAEETADPARNVPRGITAAFSVLVLTCAAVLLLAT GAGGAAAMSSSGNPLVAALGPTVAATVVNYIGLAGLVASFFSIIYAYSRQLFALSRAGYLPTALSITNSR KAPTLALIVPGVIGFALSVTGEGDLLLNMAVFGATLSYVLMMISHIVLRRRAADMARPYRTPGGIATSGF ALLVAATALIATFLVDTVAALCCLGVFCAFILYFALYSRHQLVANSPDEELAGSQDFESELQ*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. marinum M | MMAR_0665 | - | - | 100% (483) | ethanolamine transporter | 
| M. marinum M | MMAR_2052 | - | 3e-25 | 27.82% (363) | amino acid transporter | 
| M. marinum M | MMAR_3621 | rocE | 5e-25 | 25.58% (430) | cationic amino acid transport integral membrane protein RocE | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | Mb2347c | rocE | 1e-26 | 25.48% (420) | cationic amino acid transport integral membrane protein RocE | 
| M. gilvum PYR-GCK | Mflv_3442 | - | 0.0 | 75.91% (469) | ethanolamine transproter | 
| M. tuberculosis H37Rv | Rv2320c | rocE | 1e-26 | 25.48% (420) | cationic amino acid transport integral membrane protein RocE | 
| M. leprae Br4923 | MLBr_01305 | ansP2 | 2e-14 | 22.30% (426) | putative L-asparagine permease | 
| M. abscessus ATCC 19977 | MAB_2791c | - | 0.0 | 78.92% (465) | putative ethanolamine permease | 
| M. avium 104 | MAV_4216 | - | 8e-26 | 27.03% (381) | cationic amino acid transporter | 
| M. smegmatis MC2 155 | MSMEG_1552 | eat | 0.0 | 75.74% (470) | ethanolamine permease | 
| M. thermoresistible (build 8) | TH_0471 | - | 2e-28 | 27.65% (405) | POSSIBLE CATIONIC AMINO ACID TRANSPORT INTEGRAL MEMBRANE | 
| M. ulcerans Agy99 | MUL_1244 | rocE | 9e-26 | 25.58% (430) | cationic amino acid transport integral membrane protein RocE | 
| M. vanbaalenii PYR-1 | Mvan_3196 | - | 0.0 | 78.37% (467) | ethanolamine transproter | 
CLUSTAL 2.0.9 multiple sequence alignment
Mb2347c|M.bovis_AF2122/97           ---MPTTSMSLRELMLRRRPVSGAPVASGASGNLKRSFGTFQLTMFGVGA
Rv2320c|M.tuberculosis_H37Rv        ---MPTTSMSLRELMLRRRPVSGAPVASGASGNLKRSFGTFQLTMFGVGA
MUL_1244|M.ulcerans_Agy99           ---MPATSIRLREQMLRRRPAGGAPVAEGAAGSLKRSFGTFELTMFGVGS
MAV_4216|M.avium_104                ------MASRWRTKSVEQSIAD----TDEPDTRLRKDLTWWDLVVFGVAV
TH_0471|M.thermoresistible__bu      ------MTDRLRVKSVEQSIAD----TDEPDSRLRKDLSWWDLTVFGVSV
MAB_2791c|M.abscessus_ATCC_199      ----------MATTKHGLIEEHLESADYLRKRQLRSGSAGWLLLAGLGVS
MSMEG_1552|M.smegmatis_MC2_155      ----------MAG-----VEEHLESADYLQKRQLKSGSAGWVLLAGLGVS
Mflv_3442|M.gilvum_PYR-GCK          ----------MRG-----VEEHRESESYLQKRQLKSGSAGWILLAGLGVS
Mvan_3196|M.vanbaalenii_PYR-1       MSGEAHSTHTTRG-----VEAHRESDAYLQKRQLKKGSAGWILLAGLGIS
MMAR_0665|M.marinum_M               -MAGDHEVAHLAGGHLAGTDSHLESPTYLQKRQLRTGSAGWLLLAGLGVS
MLBr_01305|M.leprae_Br4923          --------MATLAESPEPKSGASRAGVLGEEAGYHKGLKPRQLQMIGIGG
                                                                      : .     *       
Mb2347c|M.bovis_AF2122/97           TIGTGIFFVLAQAVP-EAGPGVIVSFIIAGIAAGLAAICYAELASAVPIS
Rv2320c|M.tuberculosis_H37Rv        TIGTGIFFVLAQAVP-EAGPGVIVSFIIAGIAAGLAAICYAELASAVPIS
MUL_1244|M.ulcerans_Agy99           TVGTGIFFVLAEAVP-EAGPAVIVSFIIAGVAAGLAAICCAELASAVPVS
MAV_4216|M.avium_104                VIGAGIFTVTASTTGDITGPAIWVSFVIAAGTCALAALCYAEFASTLPVA
TH_0471|M.thermoresistible__bu      VIGAGIFTVTASTAGNITGPAISVSFIIAAIACGLAALCYAEFASTVPVA
MAB_2791c|M.abscessus_ATCC_199      YVVSGDYSGWNFGLRQGGFGGLALATVVIAGMYLALVLGMAELSSALPTA
MSMEG_1552|M.smegmatis_MC2_155      YVISGDYSGWNFGLEQGGFGGLAIAAIIIAGMYLALVLGMAELSSALPAA
Mflv_3442|M.gilvum_PYR-GCK          YVISGDYSGWNFGLGQGGFGGLAIAAVIIAAMYLAMVLGMAEMSSALPAA
Mvan_3196|M.vanbaalenii_PYR-1       YVVSGDYSGWNFGLGQGGFGGLAIAAVVIAAMYLAMVLGMAEMSSALPAA
MMAR_0665|M.marinum_M               YVISGDYSGWNFGLARGGFGGLAIAAVVIAAMYLALVLSMAELSSALPAA
MLBr_01305|M.leprae_Br4923          AIGTGLFLGAGGRLA-KAGPGLFLVYAVCGVFVFLILRALGELVLHRPSS
                                     : :* :             .: :   : .          .*:    * :
Mb2347c|M.bovis_AF2122/97           GSAYSYAYTTLGEAVAMVVAACLLLEYGVATAAVAVGWSGYVNKLLSNLF
Rv2320c|M.tuberculosis_H37Rv        GSAYSYAYTTLGEAVAMVVAACLLLEYGVATAAVAVGWSGYVNKLLSNLF
MUL_1244|M.ulcerans_Agy99           GSSYSYAYATLGEAVAMGVASCLLLEYGVATAAVAVGLSGYVNKLLHNVF
MAV_4216|M.avium_104                GSAYTFSYATFGEFLAWIIGWNLLLELAIGAAVVAKGWSSYLG----TVF
TH_0471|M.thermoresistible__bu      GSAYTFSYATFGEFVAWIIGWDLILEFSVAAAVVAKGWSSYLG----EVF
MAB_2791c|M.abscessus_ATCC_199      GGGYTFARRALGPWGGFATGTAILIEYSIAPAAIATFIGAYVQS--LGLF
MSMEG_1552|M.smegmatis_MC2_155      GGGYTFARRALGPWGGFATGTAILIEYAIAPAAIATFIGAYVES--LGLF
Mflv_3442|M.gilvum_PYR-GCK          GGGYTFARRALGPWGGFATGTAILIEYAIAPAAIATFIGAYVES--LNLF
Mvan_3196|M.vanbaalenii_PYR-1       GGGYTFARRALGPWGGFATGTAILIEYSIAPAAIATFIGAYVES--LGLF
MMAR_0665|M.marinum_M               GGGYTFARRALGPWGGFATGTAVLIEYSIAPAAIATFIGAYVQS--LGLF
MLBr_01305|M.leprae_Br4923          GSFVSYAREFFGEKAAYVVGWLYFLDWAMTAIVDTTAIATYLHR--WTIF
                                    *.  :::   :*   .   .   ::: .: . . :   . *:      :*
Mb2347c|M.bovis_AF2122/97           GFQMPHVLSAAPWDTHPG----WVNLPAVILIGLCALLLIRGASESARVN
Rv2320c|M.tuberculosis_H37Rv        GFQMPHVLSAAPWDTHPG----WVNLPAVILIGLCALLLIRGASESARVN
MUL_1244|M.ulcerans_Agy99           GFQLPQALSEAPWDERPGEAAGYLNLPAIILIGLCALLLIRGVSESAKVN
MAV_4216|M.avium_104                GFSGGTVKFGAAQ----------LDWGALVIVGGVATLIALGTKLSSRFS
TH_0471|M.thermoresistible__bu      EFAGATTRLGPIT----------LDWGALLIIGFVTVLLATGTKLSANVS
MAB_2791c|M.abscessus_ATCC_199      GITNG-------------------WWVYLAAYAFFIGIHLSGVGEALKVM
MSMEG_1552|M.smegmatis_MC2_155      GITAG-------------------WWIYLAAFAIFIGIHLAGVGEALKVM
Mflv_3442|M.gilvum_PYR-GCK          GITDG-------------------WWVYLAAYALFIGIHLAGVGEALKVM
Mvan_3196|M.vanbaalenii_PYR-1       GITDG-------------------WWVYLAAYAIFIGIHLSGVGEALKVM
MMAR_0665|M.marinum_M               GIRNG-------------------WWVYLTIYALFIGIHLSGVGEALKVM
MLBr_01305|M.leprae_Br4923          TALPQ-------------------WTLALLALAVVLVMNLISVEWFGELE
                                                                :   .    :   ..    .. 
Mb2347c|M.bovis_AF2122/97           AIMVLIKLGVLGMFMIIAFSAYSADHLKDFVP------------------
Rv2320c|M.tuberculosis_H37Rv        AIMVLIKLGVLGMFMIIAFSAYSADHLKDFVP------------------
MUL_1244|M.ulcerans_Agy99           AIMVLIKLGVLGMFVILALTAYDTNHLKDFAP------------------
MAV_4216|M.avium_104                AVITGIKVSVVVFVVVVGVFYIKRANYSPFIPKPEAGGQA-KGIDQSVLS
TH_0471|M.thermoresistible__bu      LAITVIKVGVVLLVVIVGAFFIKAANYTPFIPPAEAGGEAGRSLDQSLFS
MAB_2791c|M.abscessus_ATCC_199      FVITAIALVGLLIFAIAAAGHFDLHNLTNIAADESAAGSS----------
MSMEG_1552|M.smegmatis_MC2_155      FVITAIAMVGLVIFALAAIGQFDASNLTNIAPDAGAAGAS----------
Mflv_3442|M.gilvum_PYR-GCK          FVITVIALIGIVVFAVAAIPQFDSANLTDIAVTD-AAGAS----------
Mvan_3196|M.vanbaalenii_PYR-1       FVITAIALVGLVVFAVAAIPHFDSTNLTDIAVTD-AAGAS----------
MMAR_0665|M.marinum_M               FIITGVALVGLVVFAIAAVGHFRLANLVDITPSD-AVGAS----------
MLBr_01305|M.leprae_Br4923          FWAALIKVCALMAFLVVGTIFLGGRYPVDGHNTGLSLWTSHG--------
                                       . : :  :  . : .                                
Mb2347c|M.bovis_AF2122/97           ---------FGVAGIGSAAGTIFFSYIGLDAVSTAGDEVKDPQKTMPRAL
Rv2320c|M.tuberculosis_H37Rv        ---------FGVAGIGSAAGTIFFSYIGLDAVSTAGDEVKDPQKTMPRAL
MUL_1244|M.ulcerans_Agy99           ---------FGVAGVGAAAGTIFFSFIGLDAVSTAGEEVRNPQQSVPRAL
MAV_4216|M.avium_104                LLTGAHTSHYGWYGVLAGASIVFFAFIGFDIVATMAEETKHPQRDVPRGI
TH_0471|M.thermoresistible__bu      LITGAEGSSYGWYGLLAGASIVFFAFIGFDIIATTAEETKNPQRDVARGI
MAB_2791c|M.abscessus_ATCC_199      -----SILPHGYLGIWAAIPFAIWFFLAVEGVPLAAEETAHPERNVPRGI
MSMEG_1552|M.smegmatis_MC2_155      -----SFLPHGYLGIWAAIPFAIWFFLAIEGVPLAAEETVNPERNVPRGI
Mflv_3442|M.gilvum_PYR-GCK          -----PLLPFGLLGIWAAIPFAIWFFLAIEGVPLAAEEAEEPERNMPKGI
Mvan_3196|M.vanbaalenii_PYR-1       -----ALLPFGLLGIWAAIPFAIWFFLAIEGVPLAAEETAEPERNVPKGI
MMAR_0665|M.marinum_M               -----AFLPHGYLGVWSALPFAIWFFLAVEGVPLAAEETADPARNVPRGI
MLBr_01305|M.leprae_Br4923          -----GLFPTGVAPLIVVSSGVMFAYAAVELVGTAAGETVEPKKIMPRAI
                                              *   :       :: : ..: :   . *. .* : :.:.:
Mb2347c|M.bovis_AF2122/97           IAALVVVTGVYVLVALAALGTQPWQDFAEQETAGLAIILDNVTHG--EWA
Rv2320c|M.tuberculosis_H37Rv        IAALVVVTGVYVLVALAALGTQPWQDFAEQETAGLAIILDNVTHG--EWA
MUL_1244|M.ulcerans_Agy99           IAALFVVTGVYVLVAFAALGTQPWQMFAGQEEAGLATILDNVTHS--AWA
MAV_4216|M.avium_104                LASLGIVTLLYVAVAVVLSGMVSYTQLKTMPGRGQANLATAFTANGIHWA
TH_0471|M.thermoresistible__bu      MATLGIVTVLYVAVSLVLTGMVHYTELRAAG--ENANLATAFAANGIDWA
MAB_2791c|M.abscessus_ATCC_199      IAAIAVLLVTCATALVLTTGAGGAEQMSDSG----NPLVEALGHG---TA
MSMEG_1552|M.smegmatis_MC2_155      IAGMGVLLVTCVVVLFLVTGAGGAEQMSTSG----NPLVEALGDG---TA
Mflv_3442|M.gilvum_PYR-GCK          IAGMAVLLVTCVTVLVLTTGAGGAAAMSESG----NPLVEALGDS---TW
Mvan_3196|M.vanbaalenii_PYR-1       IAGMAVLLVTCVTVLVLTTGAGGAAAMSESG----NPLVEALGDS---GW
MMAR_0665|M.marinum_M               TAAFSVLVLTCAAVLLLATGAGGAAAMSSSG----NPLVAALGPT---VA
MLBr_01305|M.leprae_Br4923          NSVIARIAIFYVGSVILLALLLPYSAFKASE----SPFVTFFSKVGFYGA
                                     : :  :    .   .          :          :   .        
Mb2347c|M.bovis_AF2122/97           STILAAGAVVSIFTVTLVTMYGQTRILFAMGRDGLLPARFAKVNPRTMTP
Rv2320c|M.tuberculosis_H37Rv        STILAAGAVVSIFTVTLVTMYGQTRILFAMGRDGLLPARFAKVNPRTMTP
MUL_1244|M.ulcerans_Agy99           STVLAMGAVISIFTVTLVTMYGQTRILFAMGRDGLLPARFAAVHPRFQTP
MAV_4216|M.avium_104                SKIISIGALAGLTTVVMVLMLGQCRVLFAMARDGLLPRALAKTGSR-GTP
TH_0471|M.thermoresistible__bu      AKVISIGALAGLTTVVIVLVLGQTRVLFAMSRDGLLPRPLSKTGPR-GTP
MAB_2791c|M.abscessus_ATCC_199      AKLVNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPTVLSVTNSR-KAP
MSMEG_1552|M.smegmatis_MC2_155      AKVVNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPRALSVTNKR-KAP
Mflv_3442|M.gilvum_PYR-GCK          ATVVNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPKILSVTNRR-KAP
Mvan_3196|M.vanbaalenii_PYR-1       AKVVNYIGLAGLIASFFSIIYAYSRQLFALSRAGYLPTVLSVTNSR-KAP
MMAR_0665|M.marinum_M               ATVVNYIGLAGLVASFFSIIYAYSRQLFALSRAGYLPTALSITNSR-KAP
MLBr_01305|M.leprae_Br4923          GDLMNIVVLTAALSSLNAGLYATGRVMHSIAINGSGPKFTARMSKN-GVP
                                    . ::    : .  :     : .  * :.::.  *  *   :    .  .*
Mb2347c|M.bovis_AF2122/97           VHNTVIVAIFASTLAAFIPLD------SLADMVSIGTLTAFSVVAVGVIV
Rv2320c|M.tuberculosis_H37Rv        VHNTVIVAIFASTLAAFIPLD------SLADMVSIGTLTAFSVVAVGVIV
MUL_1244|M.ulcerans_Agy99           VSNTVVVAIAAAVLAALVPLN------RLADMVSIGTLTAFIVVSVGVII
MAV_4216|M.avium_104                VRITVLVALVVAVTASVFPIT------KLEEMVNVGTLFAFVLVSAGVMV
TH_0471|M.thermoresistible__bu      VRITVLVGALVAIAASVFPVG------NLEEMVNIGTLFAFALVSAGVIV
MAB_2791c|M.abscessus_ATCC_199      TLALIVPGVVGFALSLTGHGD------LLLNMAVFGAALSYVLMMVSHIT
MSMEG_1552|M.smegmatis_MC2_155      TLALVIPGIIGFLLSLTGQGD------LLLNMAVFGAALSYVLMMVSHIT
Mflv_3442|M.gilvum_PYR-GCK          TLALLVPGVIGFCLSLIGQGA------LLLNMAVFGAAVSYVLMMVSHIV
Mvan_3196|M.vanbaalenii_PYR-1       TLALIVPGVIGFLLSLIGQGA------LLLNMAVFGAALSYVLMMVSHIV
MMAR_0665|M.marinum_M               TLALIVPGVIGFALSVTGEGD------LLLNMAVFGATLSYVLMMISHIV
MLBr_01305|M.leprae_Br4923          YGGILLAAVICLCGVALNAFNPGQAFEIVLSVAALGIIAGWGTIVLCQLR
                                        :: .                    : .:. .*   .:  :    : 
Mb2347c|M.bovis_AF2122/97           LRVREPD--LPRG-FKVPGYPVTPVLSVLACGYILASLHWYTWLAFSGWV
Rv2320c|M.tuberculosis_H37Rv        LRVREPD--LPRG-FKVPGYPVTPVLSVLACGYILASLHWYTWLAFSGWV
MUL_1244|M.ulcerans_Agy99           LRVREPA--LPRG-FWVPGYPVTPILSILACGYLLYSLHWYTWIAFGGWV
MAV_4216|M.avium_104                LRRTRPD--LERG-FKAPWVPVLPIASIGACVWLMLNLTALTWVRFGIWL
TH_0471|M.thermoresistible__bu      LRRTRPD--LKRG-FRVPFVPWLPLAAIAACLWLMLNLTGLTWVRFLGWM
MAB_2791c|M.abscessus_ATCC_199      LRVREPN--MPRP-YRTPGGIVTTSFALIVAVLAVAATFLVNPVAAGLCL
MSMEG_1552|M.smegmatis_MC2_155      LRVREPN--MPRP-YRTPGGAVTTGFALVVACFAVIATFLVNPIAAGLCL
Mflv_3442|M.gilvum_PYR-GCK          LRRRAPE--MHRP-YRTPGGVFTTGFALVIAVLAVIATFLVDYVAALGCL
Mvan_3196|M.vanbaalenii_PYR-1       LRRREPD--MPRP-YRTPGGVVTTGFALVIAVLAVIATFLVDSVAALCCL
MMAR_0665|M.marinum_M               LRRRAAD--MARP-YRTPGGIATSGFALLVAATALIATFLVDTVAALCCL
MLBr_01305|M.leprae_Br4923          LHKMAKAGIMRRPRFRMPLAPYSGYLTLAFLFAVLVVMAFDKPIGTWTVA
                                    *:       : *  :  *        ::      :        :      
Mb2347c|M.bovis_AF2122/97           AVAVIFYLMWGRHHSALNEEVP----------------------------
Rv2320c|M.tuberculosis_H37Rv        AVAVIFYLMWGRHHSALNEEVP----------------------------
MUL_1244|M.ulcerans_Agy99           GIALIFYLFWGRHHSRLNAPALHDNPTGEER-------------------
MAV_4216|M.avium_104                VVGTAIYAGYGYWHSVQGRRDAGEPDRSDALAADPNSPVP----------
TH_0471|M.thermoresistible__bu      ALGLVLYFFYGRHHSMLGR---GMTDISARRTG-----------------
MAB_2791c|M.abscessus_ATCC_199      AVFAAFMAYFALYSRHRLVANSPDEEFAILAEAESELT------------
MSMEG_1552|M.smegmatis_MC2_155      LVFAGFMLYFAVYSRHRLVANSPDEEFAMLAEAENELK------------
Mflv_3442|M.gilvum_PYR-GCK          LVFAAFMAYFGLYSRHHLVANSPDEEFAALASAEDELR------------
Mvan_3196|M.vanbaalenii_PYR-1       VVFAAFMAYFGIYSRHHLVANSPDEEFAALAAAEGELK------------
MMAR_0665|M.marinum_M               GVFCAFILYFALYSRHQLVANSPDEELAGSQDFESELQ------------
MLBr_01305|M.leprae_Br4923          SLIVIVPALIAGWYSIRKRVMTIARERMGYTGPFPAIANPPVQPSERSHS
                                     :   .    .                                       
Mb2347c|M.bovis_AF2122/97           ---
Rv2320c|M.tuberculosis_H37Rv        ---
MUL_1244|M.ulcerans_Agy99           ---
MAV_4216|M.avium_104                ---
TH_0471|M.thermoresistible__bu      ---
MAB_2791c|M.abscessus_ATCC_199      ---
MSMEG_1552|M.smegmatis_MC2_155      ---
Mflv_3442|M.gilvum_PYR-GCK          ---
Mvan_3196|M.vanbaalenii_PYR-1       ---
MMAR_0665|M.marinum_M               ---
MLBr_01305|M.leprae_Br4923          QNP