For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NPEDDPEARIRQLEQPLADAARASELGSSQPAGESAYQNYQGYQGYQGYPGYQPPPGSVPPSYGYQPAFP GATPRSSSGNRAFWIIAAVFVVGILGAVAAVALFAVNRVSEPFTTLSPGTTVISTPPGPMSPGNKTQTPT AGPSTSAGPPAGSTISVVGVNQSQTITCNDNIVNVSGMSNTVTITGHCASVSVSGLQNTVTVETADRITA SGLNNKVTYQSGSPKISKSGSGNVIEQG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0565 | - | - | 100% (239) | hypothetical protein MMAR_0565 |
M. marinum M | MMAR_1008 | - | 1e-21 | 36.24% (149) | hypothetical protein MMAR_1008 |
M. marinum M | MMAR_1009 | - | 1e-07 | 34.07% (91) | hypothetical protein MMAR_1009 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0322c | - | 2e-64 | 53.75% (240) | hypothetical protein Mb0322c |
M. gilvum PYR-GCK | Mflv_5128 | - | 1e-39 | 39.08% (238) | hypothetical protein Mflv_5128 |
M. tuberculosis H37Rv | Rv0314c | - | 7e-65 | 54.17% (240) | hypothetical protein Rv0314c |
M. leprae Br4923 | MLBr_00431 | - | 4e-07 | 28.87% (194) | hypothetical protein MLBr_00431 |
M. abscessus ATCC 19977 | MAB_1176c | - | 1e-33 | 37.96% (245) | hypothetical protein MAB_1176c |
M. avium 104 | MAV_4846 | - | 6e-53 | 46.69% (242) | hypothetical protein MAV_4846 |
M. smegmatis MC2 155 | MSMEG_5317 | - | 6e-36 | 38.06% (247) | hypothetical protein MSMEG_5317 |
M. thermoresistible (build 8) | TH_1896 | - | 7e-15 | 38.68% (106) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4742 | - | 1e-129 | 96.28% (242) | hypothetical protein MUL_4742 |
M. vanbaalenii PYR-1 | Mvan_1215 | - | 4e-41 | 40.94% (254) | hypothetical protein Mvan_1215 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0565|M.marinum_M -------------MNPEDDPEARIRQLEQPLADAARASELGSSQPAGESA MUL_4742|M.ulcerans_Agy99 -------MWEHLCMNPEDDPEARIRQLEQPLADAARASELGSSQPAGESA Mb0322c|M.bovis_AF2122/97 ----MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSG---- Rv0314c|M.tuberculosis_H37Rv ----MIVVWEHLCMNPEDDPEARIRELERPLADVARASELGGSQSG---- MAV_4846|M.avium_104 -------------MAANDDPEERIRELERPLADSARASEQGSAPPTG--- MAB_1176c|M.abscessus_ATCC_199 -------------MEPDGDPEARIRELERPLSERAQRSELGA-------- MSMEG_5317|M.smegmatis_MC2_155 -------MCEHLRMDPQDDPEARIRDLERSLAERAKELGTGADEGHAPPA Mflv_5128|M.gilvum_PYR-GCK -------MCQHLRMEPNGDPEARIRDLERPLADRARASELGTHPYGAPPV Mvan_1215|M.vanbaalenii_PYR-1 -------MCKHLPMEPSGDPEARIRDLERPLADQAAANELGTHAY----- TH_1896|M.thermoresistible__bu -------------------------------------------------- MLBr_00431|M.leprae_Br4923 MNNPRRSEWLGPSLAGSGPIEPQVHQYP-PLTDPAYAEQAPYAPAYGASL MMAR_0565|M.marinum_M YQNYQGYQGYQGYPGYQPPPGSVPPS---YGYQPAFPGATPR---SSSGN MUL_4742|M.ulcerans_Agy99 YQNYQG------YPGYQPPPGSVPPSPPPYGYQPAFPGATPR---SSSGN Mb0322c|M.bovis_AF2122/97 --------------GYTYPPGPPPPP---YSYGGPFGGPSPR---SSSGN Rv0314c|M.tuberculosis_H37Rv --------------GYTYPPGPPPPP---YSYGGPFGGPSPR---SSSGN MAV_4846|M.avium_104 -------------PGYPPAPAP-------WSYGGPVPGPPGQ---RPSGN MAB_1176c|M.abscessus_ATCC_199 -----PSQ-------SPYPLP-----------AYDTTQISR--SPVRTFR MSMEG_5317|M.smegmatis_MC2_155 PPPPPPTQPWTQTFGTAYPPPPPGPPAPWPGYAEDFPAPPRQHVPVAHTG Mflv_5128|M.gilvum_PYR-GCK PPYQDVALP--PMPPGVEHPAP--------VYGSPYYAPPQRVVHKRSN- Mvan_1215|M.vanbaalenii_PYR-1 ---QDVAPPTTPVPPYPYPPYA--------QYGSPYYAPPQRVVDKRSHT TH_1896|M.thermoresistible__bu -------------------------------------------------- MLBr_00431|M.leprae_Br4923 PPWTPKKPPQQLPRYWQQDQPPPTDIP---PEGLTLPPPHEP----KSPH MMAR_0565|M.marinum_M RAFWIIAAVFVVGILGAVAAVALFAVNRVSEP-FTTLSPGTTVISTPPGP MUL_4742|M.ulcerans_Agy99 RAFWIIAAVFVVGILGAVAAVALFAVNRVSEP-FTTLSPGTTVISTPPGP Mb0322c|M.bovis_AF2122/97 RAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP-- Rv0314c|M.tuberculosis_H37Rv RAWWILAAVVVVGVLVLVGGIAAFSAQRLSQGNFVVLSPTPSVSRAVP-- MAV_4846|M.avium_104 RVWWVVGTLIAVGVLALAGGIAAFAAHQLSGVKSIINSPPTISRTFGPPP MAB_1176c|M.abscessus_ATCC_199 RRFLVFLAV----ITAGAAGLVFYAAEPTIRQGGPTVSGPSGTRPARSTV MSMEG_5317|M.smegmatis_MC2_155 RILMILVAVAVFLITTGIAAFLMFTNTVTSSLQ-PVADNPAG-RPALP-- Mflv_5128|M.gilvum_PYR-GCK TALWLIPVVVVVVLAAGIIGIVAYFSSGTPDSYT--YTPPVSGGGGPLDA Mvan_1215|M.vanbaalenii_PYR-1 TALWLIPLVVVGAIVAGAVAVVVFFNTGSPDSATPIPVPPISGGGGPLDP TH_1896|M.thermoresistible__bu MGHDVIRTVIGAFAAAAALGLAG---CGSQDGDT--PGPSATAG------ MLBr_00431|M.leprae_Br4923 WFLWVVAGASVVLVVGLVMALIIANGAIKTQTAVPPLPAITESSSATPTP :. .. MMAR_0565|M.marinum_M MSPGNKTQTPTAGPSTSAGPPAGSTISVVGVNQSQTITCNDN-IVNVSGM MUL_4742|M.ulcerans_Agy99 MSPGNKTQTPTAGPSTSAGPPAGSTISVVGVNQSQTITCNDN-IVNVSGM Mb0322c|M.bovis_AF2122/97 --------TPTAQPATTL-PPAGASLSVSGVNVNRTIACNDS-IVSVSGM Rv0314c|M.tuberculosis_H37Rv --------TPTAQPATTL-PPAGASLSVSGVNVNRTIACNDS-IVSVSGM MAV_4846|M.avium_104 GISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDN-PVSVSGV MAB_1176c|M.abscessus_ATCC_199 V-KIPRATPSSTAAPGPTFVPAGSTFSVAGTHKNVAISCDGC-SVSVSGV MSMEG_5317|M.smegmatis_MC2_155 --YSPPSNPVFPAIETPSVAGPGEVINVAGASNDREVTCDGG-TVMVSGV Mflv_5128|M.gilvum_PYR-GCK P-LPPQVQTRTDSTEQVITVDSGGFVSIGGVEKNQTIVCDEG-TVSISGV Mvan_1215|M.vanbaalenii_PYR-1 ---PPSVQTRIESTEQIVTVESGGFVSLGGVETRQTVVCDDG-TVNISGV TH_1896|M.thermoresistible__bu --------------EDGVRVEIANTINYGSFGTTTEIDCADGKSLNIGGS MLBr_00431|M.leprae_Br4923 TTKTSPTPTAGPAPSTTGSGTLTQTIGPSAMLDVVYSITGQGRAISVTYM .. . : : MMAR_0565|M.marinum_M SNTVTITGHCASVSVSGLQNTVTVETAD--RITASGLNNKVTYQS---GS MUL_4742|M.ulcerans_Agy99 SNTVTITGHCASVSVSGLQNTVTVETAD--RITASGLNNKVTYQS---GS Mb0322c|M.bovis_AF2122/97 SNTVVITGHCTSLTVSGMRNSVTADSVD--TIEAAGFNNEVTYHS---GS Rv0314c|M.tuberculosis_H37Rv SNTVVITGHCTSLTVSGMRNSVTVDSVD--TIEAAGFNNEVTYHS---GS MAV_4846|M.avium_104 SNTVVITGHCTSLSVSGVQNTVTVEAVE--RIGASGFNNKVTYHS---GT MAB_1176c|M.abscessus_ATCC_199 SHTVEILGNCDTLTVSGVENTVTVETAV--KIGVSGIDNQVTYRT---GE MSMEG_5317|M.smegmatis_MC2_155 ENTITITGHCAAVTISGIRNVIEVDEAD--TIGVSGFENRVTYSS---GE Mflv_5128|M.gilvum_PYR-GCK NNTIEVTGRCGSVTVSGVDNTVTVESAG--TISASGFHNRVTFLA---GD Mvan_1215|M.vanbaalenii_PYR-1 NNTIEVQGACTMVTVSGVENTVTVESAD--TISASGFDNRVTYRT---GT TH_1896|M.thermoresistible__bu NNTLTVLGTCANVNVGGTDNRITVERVDN-EISVTGFNNTLTYRD---GD MLBr_00431|M.leprae_Br4923 DTGDVIQTEFNVVLPWSKQVSLSKSAVHPASVTIVNIGHDVTCSVTVAGV . : : . : . . : .: : :* * MMAR_0565|M.marinum_M PKISKSGSGNVIEQG-- MUL_4742|M.ulcerans_Agy99 PKISKSGSGNVIEQG-- Mb0322c|M.bovis_AF2122/97 PKISNAGGSNSVQQG-- Rv0314c|M.tuberculosis_H37Rv PKISNAGGSNSVQQG-- MAV_4846|M.avium_104 PSISNSGGSNVVGRG-- MAB_1176c|M.abscessus_ATCC_199 PQVAKSGNNNTVEQS-- MSMEG_5317|M.smegmatis_MC2_155 PEITKSGMDNTVERRAP Mflv_5128|M.gilvum_PYR-GCK PQTSTSGSGNVIERQ-- Mvan_1215|M.vanbaalenii_PYR-1 PEISKSGRGNVVEPG-- TH_1896|M.thermoresistible__bu PTVSDTGRGNNIGRG-- MLBr_00431|M.leprae_Br4923 QIRQHTGVGLTICDAPR :* . :