For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TYESTTAWQELLDTLRTLDSSFLEGERAVTDDRHVADGYRMLATTLGVAFDAYLFPEPGRPQFVAVNTPF RRDRRWGGDNTDAYYFMCPVDPDRRYRISGNKGDSVYFSVTAYNEPAPGAWSDRIVAIVRDSDLDVDADG NFSFELGPTPDAAVLMTRDYQANPLTGRPITWHIEALDEPDPIRHADPQTAAGLRSVATWLRTMFAIMPL PVGTRDQDLPDEHALGHNTAHAANQFADPYQVPDANFGWSARDACYCYGSFVLDDDEALVITHRPPSCRF WNLVVWNQFMATCGAADARCSVNGHSAIANSDGSVTVVLSRGVTTHPNSLTTLDYPRGNLAFRWFLADGV PARPEVKLVKLADAPTEVA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_0339 | - | - | 100% (370) | hypothetical protein MMAR_0339 |
| M. marinum M | MMAR_0221 | - | 6e-15 | 24.01% (354) | hypothetical protein MMAR_0221 |
| M. marinum M | MMAR_5019 | - | 2e-11 | 24.43% (348) | hypothetical protein MMAR_5019 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3561c | - | 3e-09 | 23.86% (352) | hypothetical protein Mb3561c |
| M. gilvum PYR-GCK | Mflv_4383 | - | 1e-171 | 76.63% (368) | hypothetical protein Mflv_4383 |
| M. tuberculosis H37Rv | Rv3531c | - | 3e-09 | 23.86% (352) | hypothetical protein Rv3531c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4179c | - | 1e-08 | 21.82% (385) | hypothetical protein MAB_4179c |
| M. avium 104 | MAV_5166 | - | 0.0 | 84.41% (372) | hypothetical protein MAV_5166 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_3890 | - | 3e-14 | 28.16% (309) | PUTATIVE putative conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_4781 | - | 0.0 | 98.65% (370) | hypothetical protein MUL_4781 |
| M. vanbaalenii PYR-1 | Mvan_1962 | - | 1e-170 | 75.07% (369) | hypothetical protein Mvan_1962 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0339|M.marinum_M ---MTYESTTAWQELLDTLRTLDSSFLEGERAVTDDRHVADGYRMLATTL
MUL_4781|M.ulcerans_Agy99 ---MTYESTAAWQELLDTLRTLDSSFLEGERAVTDDRHVADGYRMLATTL
MAV_5166|M.avium_104 ---MTHESTTAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTL
Mflv_4383|M.gilvum_PYR-GCK MTTESHEATAAWRELLDTLRTLDASFMSGPKAVGDDRHVADGYRMLATTL
Mvan_1962|M.vanbaalenii_PYR-1 MTTESHEATAAWRELLDTLRGLDESFMTGPKSVTDDRHIADGYRMIATTL
Mb3561c|M.bovis_AF2122/97 ----------MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCI
Rv3531c|M.tuberculosis_H37Rv ----------MYSDPLREAIAEAEQLVAAAPHIETEADLLEGLQYLAGCI
MAB_4179c|M.abscessus_ATCC_199 ----------MYSEAFTAAIVEAEELIVAAPHIETEADLLEGLQYLAQGI
TH_3890|M.thermoresistible__bu ------------------MTGTATAVLAPPGNIGAATPEGDNIAEMMA-L
.: : :. : :
MMAR_0339|M.marinum_M GVAFDAYLFPEPGRPQFVAVNTPFRRDRRWGGDNTDAYYFMCPVDPDRRY
MUL_4781|M.ulcerans_Agy99 GVAFNAYLFPEPGRPQFVAVNTPFRRDRRWGGDNTDAYYFMCPVDPDRRY
MAV_5166|M.avium_104 GVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGDNTDAYYFICPVDPKRRY
Mflv_4383|M.gilvum_PYR-GCK GVAFDTYLFADPSRPHWVELNSPFRPDRRWGGDNTDAIYFMCPVDPHRRY
Mvan_1962|M.vanbaalenii_PYR-1 GVALDTYLFADRSRPRWLEVNSPFRPDRRWGGDNTDAIYYMCPVDPARRY
Mb3561c|M.bovis_AF2122/97 AGCMHLAFDYERDHPFLQSGTGPFT---KMGLDNPDTLYFGTRLQANRDY
Rv3531c|M.tuberculosis_H37Rv AGCMHLAFDYERDHPFLQSGTGPFT---KMGLDNPDTLYFGTRLQANRDY
MAB_4179c|M.abscessus_ATCC_199 AACTHMAFHTDRDHPFLLSGTGPFT---KMGLDNPDTLYFGARVSGEYEY
TH_3890|M.thermoresistible__bu AQAQLLQQAADLVRPVWVPFLSKTI---RSAGANADTTYGVALLEPGGSY
. . : :* : . *.*: * :. *
MMAR_0339|M.marinum_M RISGNKGDSVYFSVTAYNE-PAPGAWSDRIVAIVRDSDLDVDADGNFSFE
MUL_4781|M.ulcerans_Agy99 RISGNKGDSVYFSVTAYNE-PAPGAWSDRIVAIVRDSDLDVDADGNFSFE
MAV_5166|M.avium_104 RISGNKGDSVYFSVTAYNE-PSLGAWSDRVVAIVRDSDLDVDADGNFSFE
Mflv_4383|M.gilvum_PYR-GCK RISGNRGDSVYFSMTAYNE-PAPGAWSDKIVAIVRDDDLDIDAEGNFSFE
Mvan_1962|M.vanbaalenii_PYR-1 RISGNRGDSVYFSVTAYNE-PSPGAWSDRIVAILRDDDLDFDEDGNFSFD
Mb3561c|M.bovis_AF2122/97 VVSGRRGTTTDLSFQLLGG-EYTDYNVPASQAAFDDRELDIAADGSFEWR
Rv3531c|M.tuberculosis_H37Rv VVSGRRGTTTDLSFQLLGG-EYTDYNVPASQAAFDDRELDIAADGSFEWR
MAB_4179c|M.abscessus_ATCC_199 VVTGKRGTTTDLSFQVLGGGDYTDKNVPGSAIAFDDREIHIDSDGSFEVR
TH_3890|M.thermoresistible__bu RISGRRGTVVFADLLVGAGLLGVVERQQPNVGVVDFTDLDLGDDDTVELI
::*.:* . .. . ::.. :....
MMAR_0339|M.marinum_M LGPTP---DAAVLMTRDYQANPLTGRPITWHIEALDEPDPIRHADPQTAA
MUL_4781|M.ulcerans_Agy99 LGPTP---DAAVLMTRDYQANPLTGRPITWHIEALDEPDPIRHADPQTAA
MAV_5166|M.avium_104 FPPTP---DAAVLMTRDYQADPLTGRPVTWRIEALDEPAPIRHGDAETAA
Mflv_4383|M.gilvum_PYR-GCK FGPQP---GAAVLMTRDYQADPLVGRAATWTIEALEPPDPFRHGEAETAA
Mvan_1962|M.vanbaalenii_PYR-1 FGPEP---DAAVLMTRDYQADPSVGRPVTWTIEALEPPDPFRHGEAETAA
Mb3561c|M.bovis_AF2122/97 LRPS--------------APGQLVIREVYGDWSQQRGTLAIARLDTVGTA
Rv3531c|M.tuberculosis_H37Rv LRPS--------------APGQLVIREVYGDWSQQRGTLAIARLDTVGTA
MAB_4179c|M.abscessus_ATCC_199 FGPAPADDSRPNYFTLGPGPAQLVMREVYSDWREQRGSLAIARVDTAGTA
TH_3890|M.thermoresistible__bu LSAERPAGYDGHWFRLDPTADHVWLRQYFYDWETERPWSVTIERLDVAPT
: . . * . .:
MMAR_0339|M.marinum_M GLRSVATWLRTMFAIMPLPVGTRDQDLPDEHALGHNTAHAANQFADPYQV
MUL_4781|M.ulcerans_Agy99 GLRSVATWLRTMFAIMPLPVGTRDQDLPDEHALGHNTAHAANQFADPYQV
MAV_5166|M.avium_104 RLRAVATWLRTMFAIVPLAVGNR---VDDQHALGHETAHAANAFADPYQV
Mflv_4383|M.gilvum_PYR-GCK ALRASAAWMRTMFAILPLSVGVKN---ADAHELGHETALVANDFADPYQV
Mvan_1962|M.vanbaalenii_PYR-1 ALRAGAAWLRTMFAILPLAVGVKN---ADVHRLGHETAMAANEFADPYQV
Mb3561c|M.bovis_AF2122/97 PPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLN-IPVNTMVAPRLT
Rv3531c|M.tuberculosis_H37Rv PPPLTRELMEKRYATAGSQLVNRVKTWLQFPQWFYLN-IPVNTMVAPRLT
MAB_4179c|M.abscessus_ATCC_199 PAPLTKEQIEKRYASAGKQLVNRVKTWLQFPKWFYDN-LPVNTMTEPRLT
TH_3890|M.thermoresistible__bu DPPKPALRDVEINGFVDRYVSMWQSHVAAMADRGYVNRLETVGLPDTTG-
. : : . . : .
MMAR_0339|M.marinum_M PDANFGWSARDACYCYGSFVLDDDEALVITHRPPS-CRFWNLVVWNQFMA
MUL_4781|M.ulcerans_Agy99 PDANFGWSARDACYCYGSFVLDD-EALVITHRLPS-CRFWNLVVWNQFMA
MAV_5166|M.avium_104 PDANFGWSARDACYSYGSFVLDDDEALVITHRPPS-CRFWNMVVWNQFMA
Mflv_4383|M.gilvum_PYR-GCK PDANFGWSARDACYSYGSFDLAEDEALVITHRPPA-CRFWNLVVWNQFMA
Mvan_1962|M.vanbaalenii_PYR-1 PDANFGWSARDACYAYGSFDLAEDEALVITHRPPG-CRFWNLVVWNQFMA
Mb3561c|M.bovis_AF2122/97 PGG-----LATQYSSAGHFELRPGQALVITVPVSD-APYLGFQLGSMWYI
Rv3531c|M.tuberculosis_H37Rv PGG-----LATQYSSAGHFELRPGQALVITVPVSD-APYLGFQLGSMWYI
MAB_4179c|M.abscessus_ATCC_199 PGG-----LATQFSSVGHYDLADDQAMIITVPKSD-APYQGFQLGSLWYI
TH_3890|M.thermoresistible__bu --------MVAQSYFQGVYEIAEDEALLLEVRPPRRCRYWSVQLTDDRYI
* : : :*::: . . : .. : .
MMAR_0339|M.marinum_M TCGAA---DARCSVNGHSAIANSDGSVTVVLSRGVTTHPNSLTTLDYPRG
MUL_4781|M.ulcerans_Agy99 TCGAA---DARCSVNGHSAIANSDGSVTVVLSRGVTTHPNSLATLDYPRG
MAV_5166|M.avium_104 TYGAAEGPDARCSINGHSAVANSDGTVTIVLSRDRTPHPNSVTTLGYPRG
Mflv_4383|M.gilvum_PYR-GCK VPGVE---DARSSVNGYTAAPNGDGSVTVVLSRGMTAHPNSLTTLDYPRG
Mvan_1962|M.vanbaalenii_PYR-1 VPGVS---DARSSVNGSTAVPNSDGSVTVVVSRGMTSHPNSLTTLDYPRG
Mb3561c|M.bovis_AF2122/97 SLDYIN---HQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRG
Rv3531c|M.tuberculosis_H37Rv SLDYIN---HQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRG
MAB_4179c|M.abscessus_ATCC_199 SLDYIN---HQTSLNSSQAQIDPDGNIRMVVSNTNPGVTNWIETLGHRRA
TH_3890|M.thermoresistible__bu SLDWMWR---QTSLNGHQARLDPDGVFRAVISHRDPGVHNWLDAAGWTRG
. : *:*. * : ** . *::. . * : : . *.
MMAR_0339|M.marinum_M NLAFRWFLAD---GVPARPEVKLVKLADAPTEVA----------------
MUL_4781|M.ulcerans_Agy99 NLAFRWFLAD---GVPARPEVKLVKLADAPTEVA----------------
MAV_5166|M.avium_104 NLAFRWFLAD---GVPARPEVELVKASDAPTAVR----------------
Mflv_4383|M.gilvum_PYR-GCK NLAFRWFLAD---EVPARPEVRLVKVSDAPTAVT----------------
Mvan_1962|M.vanbaalenii_PYR-1 NLAFRWFLAD---QVPARPEVMLVDVAEAPTTVS----------------
Mb3561c|M.bovis_AF2122/97 FLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI
Rv3531c|M.tuberculosis_H37Rv FLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI
MAB_4179c|M.abscessus_ATCC_199 YLQFRWQRADRQLTPADGPTVEVVAVGDIPAKLPHYSQNQISEEGWRSRI
TH_3890|M.thermoresistible__bu TILGRWNRAD----ANPVPSVKLVDFADLPGFLPADVPRITSDER---RA
: ** .. * * :* * :
MMAR_0339|M.marinum_M -------------
MUL_4781|M.ulcerans_Agy99 -------------
MAV_5166|M.avium_104 -------------
Mflv_4383|M.gilvum_PYR-GCK -------------
Mvan_1962|M.vanbaalenii_PYR-1 -------------
Mb3561c|M.bovis_AF2122/97 ALRQRQIATRMLG
Rv3531c|M.tuberculosis_H37Rv ALRQRQIATRMLG
MAB_4179c|M.abscessus_ATCC_199 AERQTAIGARMLG
TH_3890|M.thermoresistible__bu QLRARAAAAQRMG