For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSLLSIGQQFPAYQLTALIGGDLSKVDAQQPGDYFTTVSSDSHPGKWRVVFFWPKDFTFICPTEIAAFGK LNEEFEGRGAQILGVSIDSEFVHFQWRAQHEDLKRLPFPMLSDIKRELSAASGALNADGVADRVTFIVDP DNDIQFVSVTAGSVGRNVEEVLRVLDALQSDQLCACNWRKGDPTLNATELLKTSA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_02042 | ahpC | - | 100% (195) | alkyl hydroperoxide reductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2454 | ahpC | 7e-99 | 86.67% (195) | alkyl hydroperoxide reductase subunit C |
| M. gilvum PYR-GCK | Mflv_3603 | - | 1e-07 | 29.27% (123) | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal |
| M. tuberculosis H37Rv | Rv2428 | ahpC | 7e-99 | 86.67% (195) | alkyl hydroperoxide reductase subunit C |
| M. abscessus ATCC 19977 | MAB_4408c | - | 7e-93 | 80.63% (191) | putative alkylhydroperoxidase C |
| M. marinum M | MMAR_2755 | ahpC | 1e-98 | 86.67% (195) | alkyl hydroperoxide reductase C protein AhpC |
| M. avium 104 | MAV_2839 | - | 8e-99 | 86.15% (195) | alkylhydroperoxide reductase |
| M. smegmatis MC2 155 | MSMEG_4891 | - | 1e-91 | 79.06% (191) | alkylhydroperoxide reductase |
| M. thermoresistible (build 8) | TH_1778 | ahpC | 6e-92 | 79.06% (191) | ALKYL HYDROPEROXIDE REDUCTASE C PROTEIN AHPC (ALKYL |
| M. ulcerans Agy99 | MUL_2999 | ahpC | 2e-98 | 86.15% (195) | alkyl hydroperoxide reductase C protein AhpC |
| M. vanbaalenii PYR-1 | Mvan_1420 | - | 3e-17 | 27.18% (195) | peroxiredoxin |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2454|M.bovis_AF2122/97 MPLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVV
Rv2428|M.tuberculosis_H37Rv MPLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVV
MMAR_2755|M.marinum_M MSLLTIGQQFPAYSLTALIGGDLSKVDAKQPGDYFKTVTSDDHAGKWRVV
MUL_2999|M.ulcerans_Agy99 MSLLTIGQQFPAYSLTALIGGDLSKVDAKQPGDYFKTVTSDDHAGKWRVV
MAV_2839|M.avium_104 MPLLTIGDQFPAYELTALIAGDLSKVDAKQPGDYFTTITSEDHAGKWRVV
MLBr_02042|M.leprae_Br4923 MSLLSIGQQFPAYQLTALIGGDLSKVDAQQPGDYFTTVSSDSHPGKWRVV
MSMEG_4891|M.smegmatis_MC2_155 MALLTIGDQFPEYDLTAVVGGDLSKVDAKQPDDYFTRVTSKDYEGKWRII
TH_1778|M.thermoresistible__bu MALLTIGDQFPAYDLTAVIGGDLSKVDAKQPDDYFTRVTSNDHPGKWRII
MAB_4408c|M.abscessus_ATCC_199 MTLRTIGDEFPAYNLTAVIGGDLSKVNAQQPDDYFTTVTSDDHPGKWRVI
Mvan_1420|M.vanbaalenii_PYR-1 ---MTVNEMPTPVVTMPRIGDPAPSFTAATTQGDIN--FPADYLGRWVIL
Mflv_3603|M.gilvum_PYR-GCK MEIVNRGDRVTEFELPDQTGTTRTLTGLLADG--------------PVVL
. .: . . . ::
Mb2454|M.bovis_AF2122/97 FFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQH
Rv2428|M.tuberculosis_H37Rv FFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQH
MMAR_2755|M.marinum_M FFWPKDFTFVCPTEIAAFGKLNDEFEDRDAQVLGVSIDSEFVHFQWRAQH
MUL_2999|M.ulcerans_Agy99 FFWPKDFTFVCPTEIAAFGKLNDEFDDRDAQVLGVSIDSEFVHFQWRAQH
MAV_2839|M.avium_104 FFWPKDFTFVCPTEIATFGKLNDEFEDRDAQVLGVSIDSEFVHFNWRAQH
MLBr_02042|M.leprae_Br4923 FFWPKDFTFICPTEIAAFGKLNEEFEGRGAQILGVSIDSEFVHFQWRAQH
MSMEG_4891|M.smegmatis_MC2_155 FFWPKDFTFVCPTEIAAFGKLNEDFEDRDAKVLGVSVDNEFVHFQWRAQH
TH_1778|M.thermoresistible__bu FFWPKDFTFVCPTEIAAFGKLNDEFEDRDAKVIGVSVDNEFVHFQWRAQH
MAB_4408c|M.abscessus_ATCC_199 FFWPKDFTFVCPTEIAAFGRLNDEFADRDTQVLGASVDNEFVHFQWRAQH
Mvan_1420|M.vanbaalenii_PYR-1 FSHPADFTPVCTSEFITFASMQDEFAAYNTDLVGLSVDGLYSHIAWLRTI
Mflv_3603|M.gilvum_PYR-GCK FFYPAAMTPGCTKEACHFRDLAAEFAAVGATRVGISAD----PVDKQAQF
* * :* *..* * : :* .: :* * * .
Mb2454|M.bovis_AF2122/97 NDLKTLP--------FPMLSDIKRELSQAAGVLN----ADGVADRVTFIV
Rv2428|M.tuberculosis_H37Rv NDLKTLP--------FPMLSDIKRELSQAAGVLN----ADGVADRVTFIV
MMAR_2755|M.marinum_M DDLKNLP--------FPMLADIKRELVAATGVLN----ADGVADRVTFIV
MUL_2999|M.ulcerans_Agy99 DDLKNLP--------FPMLADIKRELVAAAGVLN----ADGVADRVTFIV
MAV_2839|M.avium_104 EDLKNLP--------FPMLSDIKRELSLATGVLN----ADGVADRATFIV
MLBr_02042|M.leprae_Br4923 EDLKRLP--------FPMLSDIKRELSAASGALN----ADGVADRVTFIV
MSMEG_4891|M.smegmatis_MC2_155 EDLKTLP--------FPMVSDLKRELTAACGVLN----ADGVADRATFIV
TH_1778|M.thermoresistible__bu EDLKTLP--------FPMASDLKRELSEATGVLN----DEGVADRATFIV
MAB_4408c|M.abscessus_ATCC_199 EDLKTLP--------FPMLSDLKRELAEAAGVLN----ADGVADRATFIV
Mvan_1420|M.vanbaalenii_PYR-1 KEKISYKGMRDVEVTFPLIDDVTMEVARKYGMIMPGE-DTTKAVRAVFVI
Mflv_3603|M.gilvum_PYR-GCK ADKQNFD--------YPLLSDTEGTVAAQFGVKRGLLGKFMPVKRTTFVI
: :*: * : * . *..*::
Mb2454|M.bovis_AF2122/97 DPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDPT
Rv2428|M.tuberculosis_H37Rv DPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDPT
MMAR_2755|M.marinum_M DPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDPT
MUL_2999|M.ulcerans_Agy99 DPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDPT
MAV_2839|M.avium_104 DPNNEIQFVSVTAGSVGRNVEEVLRVLDALQS----DELCACNWRKGDPT
MLBr_02042|M.leprae_Br4923 DPDNDIQFVSVTAGSVGRNVEEVLRVLDALQS----DQLCACNWRKGDPT
MSMEG_4891|M.smegmatis_MC2_155 DPNNEVQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWKKGDPT
TH_1778|M.thermoresistible__bu DPNNEIQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWKKGDPT
MAB_4408c|M.abscessus_ATCC_199 DPDNIIQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDPT
Mvan_1420|M.vanbaalenii_PYR-1 DPEGVVRTIIYYPLSTGRNFDELLRVVKALQTADAFDVATPADWRPGDAV
Mflv_3603|M.gilvum_PYR-GCK DTDRTVLEVIASEFSMDTHADKALEVLRAR--------------------
*.: : : * . : :: *.*: *
Mb2454|M.bovis_AF2122/97 LDAGELLKASA-----------------------------------
Rv2428|M.tuberculosis_H37Rv LDAGELLKASA-----------------------------------
MMAR_2755|M.marinum_M LDAGELLKASA-----------------------------------
MUL_2999|M.ulcerans_Agy99 LDAGELLKASA-----------------------------------
MAV_2839|M.avium_104 LNATELLKASA-----------------------------------
MLBr_02042|M.leprae_Br4923 LNATELLKTSA-----------------------------------
MSMEG_4891|M.smegmatis_MC2_155 INAGELLAGAV-----------------------------------
TH_1778|M.thermoresistible__bu INVAEELTKAV-----------------------------------
MAB_4408c|M.abscessus_ATCC_199 INAGELMSAGV-----------------------------------
Mvan_1420|M.vanbaalenii_PYR-1 IVPPAGSCGTAQSRMSGDVVGVECQDWFFCTRELPADEVEARIRRR
Mflv_3603|M.gilvum_PYR-GCK ----------------------------------------------