For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TLRTIGDEFPAYNLTAVIGGDLSKVNAQQPDDYFTTVTSDDHPGKWRVIFFWPKDFTFVCPTEIAAFGRL NDEFADRDTQVLGASVDNEFVHFQWRAQHEDLKTLPFPMLSDLKRELAEAAGVLNADGVADRATFIVDPD NIIQFVSVTAGSVGRNVDEVLRVLDALQSDELCACNWRKGDPTINAGELMSAGV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4408c | - | - | 100% (195) | putative alkylhydroperoxidase C |
M. abscessus ATCC 19977 | MAB_1887 | - | 5e-09 | 32.85% (137) | peroxiredoxin (thioredoxin reductase) AhpE |
M. abscessus ATCC 19977 | MAB_2662 | - | 3e-07 | 30.08% (123) | peroxidoxin BcpB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2454 | ahpC | 7e-97 | 83.77% (191) | alkyl hydroperoxide reductase subunit C |
M. gilvum PYR-GCK | Mflv_2784 | - | 3e-08 | 30.65% (124) | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal |
M. tuberculosis H37Rv | Rv2428 | ahpC | 7e-97 | 83.77% (191) | alkyl hydroperoxide reductase subunit C |
M. leprae Br4923 | MLBr_02042 | ahpC | 3e-93 | 80.63% (191) | alkyl hydroperoxide reductase |
M. marinum M | MMAR_2755 | ahpC | 5e-95 | 82.38% (193) | alkyl hydroperoxide reductase C protein AhpC |
M. avium 104 | MAV_2839 | - | 2e-94 | 83.25% (191) | alkylhydroperoxide reductase |
M. smegmatis MC2 155 | MSMEG_4891 | - | 2e-96 | 83.08% (195) | alkylhydroperoxide reductase |
M. thermoresistible (build 8) | TH_1778 | ahpC | 3e-97 | 84.10% (195) | ALKYL HYDROPEROXIDE REDUCTASE C PROTEIN AHPC (ALKYL |
M. ulcerans Agy99 | MUL_2999 | ahpC | 2e-95 | 82.90% (193) | alkyl hydroperoxide reductase C protein AhpC |
M. vanbaalenii PYR-1 | Mvan_1420 | - | 3e-22 | 33.00% (200) | peroxiredoxin |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4891|M.smegmatis_MC2_155 MALLTIGDQFPEYDLTAVVGGDLSKVDAKQPDDYFTRVTSKDYEGKWRII TH_1778|M.thermoresistible__bu MALLTIGDQFPAYDLTAVIGGDLSKVDAKQPDDYFTRVTSNDHPGKWRII MAB_4408c|M.abscessus_ATCC_199 MTLRTIGDEFPAYNLTAVIGGDLSKVNAQQPDDYFTTVTSDDHPGKWRVI Mb2454|M.bovis_AF2122/97 MPLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVV Rv2428|M.tuberculosis_H37Rv MPLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVV MMAR_2755|M.marinum_M MSLLTIGQQFPAYSLTALIGGDLSKVDAKQPGDYFKTVTSDDHAGKWRVV MUL_2999|M.ulcerans_Agy99 MSLLTIGQQFPAYSLTALIGGDLSKVDAKQPGDYFKTVTSDDHAGKWRVV MAV_2839|M.avium_104 MPLLTIGDQFPAYELTALIAGDLSKVDAKQPGDYFTTITSEDHAGKWRVV MLBr_02042|M.leprae_Br4923 MSLLSIGQQFPAYQLTALIGGDLSKVDAQQPGDYFTTVSSDSHPGKWRVV Mvan_1420|M.vanbaalenii_PYR-1 ---MTVNEMPTPVVTMPRIGDPAPSFTAATTQGDIN--FPADYLGRWVIL Mflv_2784|M.gilvum_PYR-GCK --MLSVGSPAPDFTLKDQNNQVVSLAAFRG--------------DRDVVL ::.. . . .: :: MSMEG_4891|M.smegmatis_MC2_155 FFWPKDFTFVCPTEIAAFGKLNEDFEDRDAKVLGVSVDNEFVHFQWRAQH TH_1778|M.thermoresistible__bu FFWPKDFTFVCPTEIAAFGKLNDEFEDRDAKVIGVSVDNEFVHFQWRAQH MAB_4408c|M.abscessus_ATCC_199 FFWPKDFTFVCPTEIAAFGRLNDEFADRDTQVLGASVDNEFVHFQWRAQH Mb2454|M.bovis_AF2122/97 FFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQH Rv2428|M.tuberculosis_H37Rv FFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQH MMAR_2755|M.marinum_M FFWPKDFTFVCPTEIAAFGKLNDEFEDRDAQVLGVSIDSEFVHFQWRAQH MUL_2999|M.ulcerans_Agy99 FFWPKDFTFVCPTEIAAFGKLNDEFDDRDAQVLGVSIDSEFVHFQWRAQH MAV_2839|M.avium_104 FFWPKDFTFVCPTEIATFGKLNDEFEDRDAQVLGVSIDSEFVHFNWRAQH MLBr_02042|M.leprae_Br4923 FFWPKDFTFICPTEIAAFGKLNEEFEGRGAQILGVSIDSEFVHFQWRAQH Mvan_1420|M.vanbaalenii_PYR-1 FSHPADFTPVCTSEFITFASMQDEFAAYNTDLVGLSVDGLYSHIAWLRTI Mflv_2784|M.gilvum_PYR-GCK VFFPLAFTGICQRELDEIRHHIGDFVNDETATLTISVGPSPVHKVWATQR . * ** :* *: : :* : : *:. * * MSMEG_4891|M.smegmatis_MC2_155 EDLKTLP--------FPMVSDLK--RELTAACGVLN---ADGVADRATFI TH_1778|M.thermoresistible__bu EDLKTLP--------FPMASDLK--RELSEATGVLN---DEGVADRATFI MAB_4408c|M.abscessus_ATCC_199 EDLKTLP--------FPMLSDLK--RELAEAAGVLN---ADGVADRATFI Mb2454|M.bovis_AF2122/97 NDLKTLP--------FPMLSDIK--RELSQAAGVLN---ADGVADRVTFI Rv2428|M.tuberculosis_H37Rv NDLKTLP--------FPMLSDIK--RELSQAAGVLN---ADGVADRVTFI MMAR_2755|M.marinum_M DDLKNLP--------FPMLADIK--RELVAATGVLN---ADGVADRVTFI MUL_2999|M.ulcerans_Agy99 DDLKNLP--------FPMLADIK--RELVAAAGVLN---ADGVADRVTFI MAV_2839|M.avium_104 EDLKNLP--------FPMLSDIK--RELSLATGVLN---ADGVADRATFI MLBr_02042|M.leprae_Br4923 EDLKRLP--------FPMLSDIK--RELSAASGALN---ADGVADRVTFI Mvan_1420|M.vanbaalenii_PYR-1 KEKISYKGMRDVEVTFPLIDDVT--MEVARKYGMIMPGEDTTKAVRAVFV Mflv_2784|M.gilvum_PYR-GCK G----YS--------FPVLSDFWPHGAVSQAYGVFN--DATGFSNRGTFV **: *. : * : : * .*: MSMEG_4891|M.smegmatis_MC2_155 VDPNNEVQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWKKGDP TH_1778|M.thermoresistible__bu VDPNNEIQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWKKGDP MAB_4408c|M.abscessus_ATCC_199 VDPDNIIQFVSVTAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDP Mb2454|M.bovis_AF2122/97 VDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDP Rv2428|M.tuberculosis_H37Rv VDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDP MMAR_2755|M.marinum_M VDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDP MUL_2999|M.ulcerans_Agy99 VDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----DELCACNWRKGDP MAV_2839|M.avium_104 VDPNNEIQFVSVTAGSVGRNVEEVLRVLDALQS----DELCACNWRKGDP MLBr_02042|M.leprae_Br4923 VDPDNDIQFVSVTAGSVGRNVEEVLRVLDALQS----DQLCACNWRKGDP Mvan_1420|M.vanbaalenii_PYR-1 IDPEGVVRTIIYYPLSTGRNFDELLRVVKALQTADAFDVATPADWRPGDA Mflv_2784|M.gilvum_PYR-GCK VDRSGLVRFAECKEPGEARDQAAWTRALAALRG----------------- :* .. :: . .*: *.: **: MSMEG_4891|M.smegmatis_MC2_155 TINAGELLAGAV----------------------------------- TH_1778|M.thermoresistible__bu TINVAEELTKAV----------------------------------- MAB_4408c|M.abscessus_ATCC_199 TINAGELMSAGV----------------------------------- Mb2454|M.bovis_AF2122/97 TLDAGELLKASA----------------------------------- Rv2428|M.tuberculosis_H37Rv TLDAGELLKASA----------------------------------- MMAR_2755|M.marinum_M TLDAGELLKASA----------------------------------- MUL_2999|M.ulcerans_Agy99 TLDAGELLKASA----------------------------------- MAV_2839|M.avium_104 TLNATELLKASA----------------------------------- MLBr_02042|M.leprae_Br4923 TLNATELLKTSA----------------------------------- Mvan_1420|M.vanbaalenii_PYR-1 VIVPPAGSCGTAQSRMSGDVVGVECQDWFFCTRELPADEVEARIRRR Mflv_2784|M.gilvum_PYR-GCK -----------------------------------------------