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RTTATPANPATSRPVAASSRRRRPPTTTYRGDPGMWSWVLHRISGATIFFFLFVHVLDAAMLRVNPQTYN AVLSTYKAPIVGFMEYGLVAAVGFHGLNGIRVILIDFWSEGPRHQRLMLWIISVIFLLLLVPAGVVIGIH MWEHFRMWEHFR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_00699 | sdhC | - | 100% (153) | putative succinate dehydrogenase cytochrome B-556 subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3345 | sdhC | 3e-56 | 88.39% (112) | succinate dehydrogenase cytochrome B-556 subunit |
| M. gilvum PYR-GCK | Mflv_4844 | - | 4e-51 | 66.67% (144) | succinate dehydrogenase, cytochrome b subunit |
| M. tuberculosis H37Rv | Rv3316 | sdhC | 3e-56 | 88.39% (112) | succinate dehydrogenase cytochrome B-556 subunit |
| M. abscessus ATCC 19977 | MAB_3673 | - | 3e-49 | 62.50% (144) | succinate dehydrogenase (cytochrome b-556 subunit) SdhC |
| M. marinum M | MMAR_1203 | sdhC | 1e-46 | 72.97% (111) | succinate dehydrogenase (cytochrome B-556 subunit) SdhC |
| M. avium 104 | MAV_4297 | sdhC | 2e-52 | 83.93% (112) | succinate dehydrogenase, cytochrome b556 subunit |
| M. smegmatis MC2 155 | MSMEG_1672 | sdhC | 1e-47 | 64.71% (136) | succinate dehydrogenase, cytochrome b556 subunit |
| M. thermoresistible (build 8) | TH_2180 | sdhC | 5e-45 | 71.17% (111) | PROBABLE SUCCINATE DEHYDROGENASE (CYTOCHROME B-556 SUBUNIT) |
| M. ulcerans Agy99 | MUL_1367 | sdhC | 1e-46 | 72.97% (111) | succinate dehydrogenase (cytochrome B-556 subunit) SdhC |
| M. vanbaalenii PYR-1 | Mvan_1589 | - | 1e-52 | 67.36% (144) | succinate dehydrogenase, cytochrome b subunit |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4844|M.gilvum_PYR-GCK -MSTATSADTDLPEPRSKPTRRR----TFYRGDPGMWSWLLHRISGATIF
Mvan_1589|M.vanbaalenii_PYR-1 -MSTATPADTDIPAPRSEPSRRR----TIYRGDPGMWSWVLHRISGATIF
MSMEG_1672|M.smegmatis_MC2_155 -MSTQT----EVPAPQPKKTRRR----TLYRGDPGMWSWVLHRITGATIF
TH_2180|M.thermoresistible__bu -----------------------------------MWSWVLHRITGATIF
MAB_3673|M.abscessus_ATCC_1997 -MTTATP--ETASSGREGNRLKR----SLYRGDPGMWSWVLHRITGATIF
MMAR_1203|M.marinum_M -----------------------------------MWSWVLHRITGAAIF
MUL_1367|M.ulcerans_Agy99 -----------------------------------MWSWVLHRITGAAIF
MLBr_00699|M.leprae_Br4923 MRTTATPANPATSRPVAASSRRRRPPTTTYRGDPGMWSWVLHRISGATIF
MAV_4297|M.avium_104 -----------------------------------MWSWVLHRISGATIF
Mb3345|M.bovis_AF2122/97 -----------------------------------MWSWVCHRISGATIF
Rv3316|M.tuberculosis_H37Rv -----------------------------------MWSWVCHRISGATIF
****: ***:**:**
Mflv_4844|M.gilvum_PYR-GCK FFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLYHALNG
Mvan_1589|M.vanbaalenii_PYR-1 FFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLYHALNG
MSMEG_1672|M.smegmatis_MC2_155 FFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLFHALNG
TH_2180|M.thermoresistible__bu FFLFVHVLDTALVRVSPEAYNAVIETYKTPIVGLMEIGLVAAVLFHALNG
MAB_3673|M.abscessus_ATCC_1997 FFLFVHVLDTALVRVSPESYNSVIETYKTPIVGLMELGLVAAVLYHALNG
MMAR_1203|M.marinum_M FFLFVHVLDTALVRVSPQAYNSVIDTYKTPIVGLMEFGLVIAVSYHALNG
MUL_1367|M.ulcerans_Agy99 FFLFVHVLDTALVRVRPQAYNSVIDTYKTPIVGLMEFGLVIAVSYHALNG
MLBr_00699|M.leprae_Br4923 FFLFVHVLDAAMLRVNPQTYNAVLSTYKAPIVGFMEYGLVAAVGFHGLNG
MAV_4297|M.avium_104 FFLFVHVLDAAMLRVSPQTYNAVIHDYQMPIVGVMEYGLIAAVLFHGLNG
Mb3345|M.bovis_AF2122/97 FFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLFHALNG
Rv3316|M.tuberculosis_H37Rv FFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLFHALNG
*********:*::** *::** *: *: ****.** **: ** :*.***
Mflv_4844|M.gilvum_PYR-GCK IRIILIDFWSEGPRHQRKMLWIIAGIFIVLFTAGLGVIGMHMAERFL---
Mvan_1589|M.vanbaalenii_PYR-1 IRIILIDFWSEGPRHQRKMLWVIAGVFIAVFIAALGVIGMHMAERFL---
MSMEG_1672|M.smegmatis_MC2_155 IRVILIDFWAKGPRYQRQMLAVIAGLFLVIFIAAVGVIGMHMVERFL---
TH_2180|M.thermoresistible__bu VRVILIDFWSEGPRYQRQMLWVVAAIFIAVLIAAVGMIGMHMAERFL---
MAB_3673|M.abscessus_ATCC_1997 VRVILVDFWSKGPRYQRLMLWIIGAVWFVVMVPAVTRILMHMAERFL---
MMAR_1203|M.marinum_M IRIILIDFWSEGPRYQRLMLAVVGVAWLLILVPSAVVLGIHMAEHFL---
MUL_1367|M.ulcerans_Agy99 IRIILIDFWSEGPRYQRLMLAVVGVAWLLILVPSAVVLGIHMAEHFL---
MLBr_00699|M.leprae_Br4923 IRVILIDFWSEGPRHQRLMLWIISVIFLLLLVPAGVVIGIHMWEHFRMWE
MAV_4297|M.avium_104 IRVILIDFWSEGPRHQRLMFWIVGVVFLLLMVPAGVVTVIHMLGHFR---
Mb3345|M.bovis_AF2122/97 IRVILIDFWSEGPRYQRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR---
Rv3316|M.tuberculosis_H37Rv IRVILIDFWSEGPRYQRLMLWIIGSVFLLLMVPAGVVVGIHMWEHFR---
:*:**:***::***:** *: ::. :: :: .. :** :*
Mflv_4844|M.gilvum_PYR-GCK ---
Mvan_1589|M.vanbaalenii_PYR-1 ---
MSMEG_1672|M.smegmatis_MC2_155 ---
TH_2180|M.thermoresistible__bu ---
MAB_3673|M.abscessus_ATCC_1997 ---
MMAR_1203|M.marinum_M ---
MUL_1367|M.ulcerans_Agy99 ---
MLBr_00699|M.leprae_Br4923 HFR
MAV_4297|M.avium_104 ---
Mb3345|M.bovis_AF2122/97 ---
Rv3316|M.tuberculosis_H37Rv ---