For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVRVGINGFGRIGRNFYRALLAQQEHGIADVQVVAINDITDNSTLAYLLKFDSILGRLPHDVSLEEEDT IVVGSEKIKALAVREGPAALPWHAFGVDVVVESTGLFTNAAKAKGHLEAGAKKVIVSAPATDPDITIVFG VNDDKYDGSQNIISNASCTTNCLAPLAKVLHDQFGIVKGLMTTVHAYTQDQNLQDGPHSDLRRARAAALN VVPTSTGAAKAIGLVMPELKGKLDGYALRVPIPTGSVTDLTADLSKCVSVNEINAVFQDAAEGRLKGILK YVDAPIVSSDIVTDPHSSIFDSGLTKVIASQAKVVSWYDNEWGYSNRLVDLVGLVGKSL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_00570 | gap | - | 100% (339) | glyceraldehyde 3-phosphate dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1471 | gap | 1e-170 | 89.38% (339) | glyceraldehyde-3-phosphate dehydrogenase |
M. gilvum PYR-GCK | Mflv_3710 | - | 1e-159 | 81.18% (340) | glyceraldehyde-3-phosphate dehydrogenase, type I |
M. tuberculosis H37Rv | Rv1436 | gap | 1e-170 | 89.38% (339) | glyceraldehyde-3-phosphate dehydrogenase |
M. abscessus ATCC 19977 | MAB_2779c | - | 1e-162 | 82.65% (340) | glyceraldehyde-3-phosphate dehydrogenase, type I |
M. marinum M | MMAR_2239 | gap | 1e-172 | 87.91% (339) | glyceraldehyde 3-phosphate dehydrogenase Gap |
M. avium 104 | MAV_3341 | gap | 1e-170 | 88.20% (339) | glyceraldehyde-3-phosphate dehydrogenase, type I |
M. smegmatis MC2 155 | MSMEG_3084 | gap | 1e-162 | 82.65% (340) | glyceraldehyde-3-phosphate dehydrogenase, type I |
M. thermoresistible (build 8) | TH_0426 | gap | 1e-158 | 81.14% (334) | PROBABLE GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE GAP (GAPDH) |
M. ulcerans Agy99 | MUL_1828 | gap | 1e-172 | 87.91% (339) | glyceraldehyde 3-phosphate dehydrogenase Gap |
M. vanbaalenii PYR-1 | Mvan_2703 | - | 1e-160 | 83.24% (340) | glyceraldehyde-3-phosphate dehydrogenase, type I |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3710|M.gilvum_PYR-GCK MERLLLGWLPSIADDSLIEPEETHVTIRVGVNGFGRIGRNFFRALDAQKA Mvan_2703|M.vanbaalenii_PYR-1 ----------------MIEPEETDVTIRVGVNGFGRIGRNFFRALDAQKA MAB_2779c|M.abscessus_ATCC_199 ------------------------MTVRVGVNGFGRIGRNFFRALDAQKA MSMEG_3084|M.smegmatis_MC2_155 ------------------------MTIRVGVNGFGRIGRNFYRALATQKA TH_0426|M.thermoresistible__bu ------------------------------VNGFGRIGRNFYRALAAQQA MMAR_2239|M.marinum_M ------------------------MTVRVGINGFGRIGRNFYRALLAQQQ MUL_1828|M.ulcerans_Agy99 ------------------------MTVRVGINGFGRIGRNFYRALLAQQQ MAV_3341|M.avium_104 ------------------------MTVRVGINGFGRIGRNFYRALLAQQE Mb1471|M.bovis_AF2122/97 ------------------------MTVRVGINGFGRIGRNFYRALLAQQE Rv1436|M.tuberculosis_H37Rv ------------------------MTVRVGINGFGRIGRNFYRALLAQQE MLBr_00570|M.leprae_Br4923 ------------------------MTVRVGINGFGRIGRNFYRALLAQQE :**********:*** :*: Mflv_3710|M.gilvum_PYR-GCK AGKNTDIEIIAVNDLTSNATLAHLLKFDSILGRLPYDVSLEGEDTIVVGD Mvan_2703|M.vanbaalenii_PYR-1 DGKNTDIEIVAVNDLTDNATLAHLLKFDSILGRLPYDVSLEGEDTIVVGD MAB_2779c|M.abscessus_ATCC_199 QGVNTDIEIVAVNDLTDNATLAHLLKFDSILGRLPYDVSLEGDDTIVVGD MSMEG_3084|M.smegmatis_MC2_155 EGKNTDIEIVAVNDLTDNATLAHLLKFDSILGRLPQDVSLEGDDTIVIGD TH_0426|M.thermoresistible__bu EGKSTDVEIVAVNDLTDNATLAHLLKFDSILGRLPEEVSLEGEDTIVIGS MMAR_2239|M.marinum_M QG-SADIEVIAVNDITDNQTLAHLLKFDSILGRLPQDVSLEGEDTIVVGG MUL_1828|M.ulcerans_Agy99 QG-SADIEVIAVNDITDNQTLAHLLKFDSILGRLPQDVSLEGEDTIVVGG MAV_3341|M.avium_104 QG-TADIEVVAVNDITDNSTLAHLLKFDSILGRLPYDVSLEGEDTIVVGP Mb1471|M.bovis_AF2122/97 QG-TADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGR Rv1436|M.tuberculosis_H37Rv QG-TADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGR MLBr_00570|M.leprae_Br4923 HG-IADVQVVAINDITDNSTLAYLLKFDSILGRLPHDVSLEEEDTIVVGS * :*::::* **:*.* ***:************ :*.** :****:* Mflv_3710|M.gilvum_PYR-GCK TKIKALEVKEGPAALPWGDLGVDVVVESTGIFTKRDKAQGHLDAGAKKVI Mvan_2703|M.vanbaalenii_PYR-1 TKIKALEVKEGPAALPWGDLGVDVVVESTGIFTARAKAQGHLDAGAKKVI MAB_2779c|M.abscessus_ATCC_199 HKIKALEVKEGPAALPWGDLGVDVVVESTGIFTARAKAQGHLDAGAKKVI MSMEG_3084|M.smegmatis_MC2_155 TKIKALEVKEGPAALPWGDLGVDVVVESTGIFTNAAKAKGHLDAGAKKVI TH_0426|M.thermoresistible__bu TKIKALAIKEGPSALPWGDLGVDVVLESTGIFTDAAKARGHLEAGAKKVI MMAR_2239|M.marinum_M VKIKALEVREGPAAMPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVI MUL_1828|M.ulcerans_Agy99 VKIKALEVREGPAAMPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVI MAV_3341|M.avium_104 AKIKALEVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVI Mb1471|M.bovis_AF2122/97 AKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVI Rv1436|M.tuberculosis_H37Rv AKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVI MLBr_00570|M.leprae_Br4923 EKIKALAVREGPAALPWHAFGVDVVVESTGLFTNAAKAKGHLEAGAKKVI ***** ::***:*:** :*****:****:** **:***:******* Mflv_3710|M.gilvum_PYR-GCK ISAPASDEDITIVLGVNDDKYDGSQNIISNASCTTNCLGPLAKVLNDEFG Mvan_2703|M.vanbaalenii_PYR-1 ISAPASDEDITIVLGVNDDKYDGSQNIISNASCTTNCLGPLAKVLNDEFG MAB_2779c|M.abscessus_ATCC_199 ISAPASDEDITIVLGVNDDKYDGSQNIISNASCTTNCLGPLAKVLNDEFG MSMEG_3084|M.smegmatis_MC2_155 ISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLGPLAKVLNDEFG TH_0426|M.thermoresistible__bu ISAPAKGEDLTVVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLHDEFG MMAR_2239|M.marinum_M ISAPATDPDLTIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLHDEFG MUL_1828|M.ulcerans_Agy99 ISAPATDPDLTIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLHDEFG MAV_3341|M.avium_104 ISAPATDEDITVVLGVNDDKYDGSQNIISNASCTTNCLAPLTKVLDDEFG Mb1471|M.bovis_AF2122/97 ISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFG Rv1436|M.tuberculosis_H37Rv ISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFG MLBr_00570|M.leprae_Br4923 VSAPATDPDITIVFGVNDDKYDGSQNIISNASCTTNCLAPLAKVLHDQFG :****.. *:*:*:************************.**:***.*:** Mflv_3710|M.gilvum_PYR-GCK IVKGLMTTIHAYTQDQNLQDGPHGDLRRARAAAINIVPTSTGAAKAIGLV Mvan_2703|M.vanbaalenii_PYR-1 IVKGLMTTVHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV MAB_2779c|M.abscessus_ATCC_199 IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV MSMEG_3084|M.smegmatis_MC2_155 IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV TH_0426|M.thermoresistible__bu IVKGLMTTVHAYTQDQNLQDGPHKDLRRARAAAINIVPTSTGAAKAIGLV MMAR_2239|M.marinum_M IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV MUL_1828|M.ulcerans_Agy99 IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV MAV_3341|M.avium_104 IVRGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV Mb1471|M.bovis_AF2122/97 IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV Rv1436|M.tuberculosis_H37Rv IVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLV MLBr_00570|M.leprae_Br4923 IVKGLMTTVHAYTQDQNLQDGPHSDLRRARAAALNVVPTSTGAAKAIGLV **:*****:************** *********:*:************** Mflv_3710|M.gilvum_PYR-GCK LPELKGKLDGYALRVPIPTGSVTDLTAELAKPGTVDEINAAMKAAADGPL Mvan_2703|M.vanbaalenii_PYR-1 LPELKGKLDGYALRVPIPTGSCTDLTAELAKPGTAAEINAAMKAAAEGPL MAB_2779c|M.abscessus_ATCC_199 LPELKGKLDGYALRVPIPTGSATDLTVELKKAASADEINAAMKAAAEGKL MSMEG_3084|M.smegmatis_MC2_155 LPELKGKLDGYALRVPIPTGSVTDLTAELAKSASVEDINAAMKAAAEGPL TH_0426|M.thermoresistible__bu MPELQGKLDGYALRVPIPTGSATDLTAELAKAATVDEINAAMKAAAEGPL MMAR_2239|M.marinum_M MPELKGKLDGYALRVPIPTGSVTDLTAELAKAATAEEINAAFKAAAEGRL MUL_1828|M.ulcerans_Agy99 MPELKGKLDGYALRVPIPTGSVTDLTAELAKAATAEEINAAFKAAAEGRL MAV_3341|M.avium_104 MPNLKGKLDGYALRVPIPTGSVTDLTAELKKPASVEDINAAFKAAAEGRL Mb1471|M.bovis_AF2122/97 MPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRL Rv1436|M.tuberculosis_H37Rv MPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRL MLBr_00570|M.leprae_Br4923 MPELKGKLDGYALRVPIPTGSVTDLTADLSKCVSVNEINAVFQDAAEGRL :*:*:**************** ****.:* . :. :***.:: **:* * Mflv_3710|M.gilvum_PYR-GCK KGILKYYDAPIVSSDIVTDPHSSLYDAGLTKVIDNQAKVVSWYDNEWGYS Mvan_2703|M.vanbaalenii_PYR-1 KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDNQAKVVSWYDNEWGYS MAB_2779c|M.abscessus_ATCC_199 KGILKYYDAPIVSSDIVTDPHSSIFDAGLTKVIDDQAKVVSWYDNEWGYS MSMEG_3084|M.smegmatis_MC2_155 KGILKYYDAPIVSSDIVTDPHSSLYDAGLTKVIDNQAKVVSWYDNEWGYS TH_0426|M.thermoresistible__bu KGILKYYDAPIVSSDIVTDPHSSLYDAGLTKVIDNQVKVVSWYDNEWGYA MMAR_2239|M.marinum_M KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQAKVVSWYDNEWGYS MUL_1828|M.ulcerans_Agy99 KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQAKVVSWYDNEWGYS MAV_3341|M.avium_104 KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDNQAKVVSWYDNEWGYS Mb1471|M.bovis_AF2122/97 KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQAKVVSWYDNEWGYS Rv1436|M.tuberculosis_H37Rv KGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQAKVVSWYDNEWGYS MLBr_00570|M.leprae_Br4923 KGILKYVDAPIVSSDIVTDPHSSIFDSGLTKVIASQAKVVSWYDNEWGYS ****** ****************::*:****** .*.************: Mflv_3710|M.gilvum_PYR-GCK NRLVDLVGLVGKSL Mvan_2703|M.vanbaalenii_PYR-1 NRLVDLVGLVGKSL MAB_2779c|M.abscessus_ATCC_199 NRLVDLVGLVGKSL MSMEG_3084|M.smegmatis_MC2_155 NRLADLVALVGKSL TH_0426|M.thermoresistible__bu NRCVDLVAMVGKSL MMAR_2239|M.marinum_M NRLIDLVALVGKSL MUL_1828|M.ulcerans_Agy99 NRLIDLVALVGKSL MAV_3341|M.avium_104 NRLVDLVALVGKSL Mb1471|M.bovis_AF2122/97 NRLVDLVTLVGKSL Rv1436|M.tuberculosis_H37Rv NRLVDLVTLVGKSL MLBr_00570|M.leprae_Br4923 NRLVDLVGLVGKSL ** *** :*****