For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKHLTLATISVALSLALVSCGHDHKSGDKTSSSTSTATSSKSSTAPAAQAKYTIADYVKDNHISETPVHH GDPGPNVDLPVPAGWQLNQNSGTSYGGIVQSQPADPSDPPTVSALFSKLTGDVDPAKIIQYAPGEVQNLP GYSGSGDGSASTLGGYQAWQLGGTYQRGGKTRVIAQKTVVIPSQGAVYVLQLNADGLESDQGPLMDATHI IDEQTTITG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4561 | - | - | 100% (219) | LpqN protein |
M. avium 104 | MAV_1154 | - | 2e-08 | 25.76% (198) | LpqT protein |
M. avium 104 | MAV_3310 | - | 6e-06 | 29.87% (154) | 27 kDa lipoprotein antigen |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0598c | lpqN | 2e-79 | 62.56% (227) | lipoprotein LpqN |
M. gilvum PYR-GCK | Mflv_1917 | - | 4e-47 | 44.44% (225) | hypothetical protein Mflv_1917 |
M. tuberculosis H37Rv | Rv0583c | lpqN | 2e-79 | 62.56% (227) | lipoprotein LpqN |
M. leprae Br4923 | MLBr_00246 | lpqT | 1e-09 | 25.98% (204) | putative lipoprotein |
M. abscessus ATCC 19977 | MAB_1145c | - | 9e-12 | 25.73% (206) | putative lipoprotein LpqT precursor |
M. marinum M | MMAR_0950 | lpqN | 9e-79 | 63.00% (227) | lipoprotein, LpqN |
M. smegmatis MC2 155 | MSMEG_5456 | - | 2e-57 | 52.02% (223) | MK35 lipoprotein |
M. thermoresistible (build 8) | TH_0934 | lpqN | 1e-48 | 45.00% (220) | PROBABLE CONSERVED LIPOPROTEIN LPQN |
M. ulcerans Agy99 | MUL_0701 | lpqN | 2e-78 | 62.67% (225) | lipoprotein, LpqN |
M. vanbaalenii PYR-1 | Mvan_4816 | - | 9e-49 | 46.33% (218) | LpqN |
CLUSTAL 2.0.9 multiple sequence alignment Mb0598c|M.bovis_AF2122/97 ----MKHFTAAVATVALSLALAGCSFNIKT----DSAPTTSPTTTSPTTS Rv0583c|M.tuberculosis_H37Rv ----MKHFTAAVATVALSLALAGCSFNIKT----DSAPTTSPTTTSPTTS MMAR_0950|M.marinum_M ----MKDLTAVLATAALSLTLVACGSGTTS----DNKTSTSTSTSTSTST MUL_0701|M.ulcerans_Agy99 ----MKDLTAVLATAALSLTLVACGSGTTS----DNK--TSTSTSTSTST MAV_4561|M.avium_104 ----MKHLTLATISVALSLALVSCGHDHKS----GDK-------TSSSTS Mflv_1917|M.gilvum_PYR-GCK MIIANRAGAAAVA-VAVGIGLSACGSQTTG-DATTAQETPSASETSSTSS Mvan_4816|M.vanbaalenii_PYR-1 MTIATRAGVAAIAAVALGIGLSACGSDST-------DEKPSAASSSATS- MSMEG_5456|M.smegmatis_MC2_155 MITTFRSGGAVLAACALATALSACGSDVTAGQATTGDQTISATSTAAQTS TH_0934|M.thermoresistible__bu -MSRTARRATRIAAVAAAAALAACGSTADD---QTVMPPDTGGATASATM MLBr_00246|M.leprae_Br4923 MQAIRLGLHTAAAVVTLSISAVSCGTKTPD-----------------YQL MAB_1145c|M.abscessus_ATCC_199 -----MRSAALAAAAVAAFAMIGCGSHNPG-----------------QPT . . .*. Mb0598c|M.bovis_AF2122/97 TTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDPGSPTIDLPVPDD Rv0583c|M.tuberculosis_H37Rv TTTTSATTSAQAAGPNYTIADYIRDNHIQETPVHHGDPGSPTIDLPVPDD MMAR_0950|M.marinum_M STTTSATSPTPGAQANYTIADYIRDNDIQETPVHHGDPGSPNIDLPVPDG MUL_0701|M.ulcerans_Agy99 STTTSATSPTPGAQANYTIADYIRDNDIQETPVHHGDPGSPNIDLPVPDG MAV_4561|M.avium_104 TATSSKSSTAPAAQAKYTIADYVKDNHISETPVHHGDPG-PNVDLPVPAG Mflv_1917|M.gilvum_PYR-GCK TTPAAPTSPSPAAAPGITIQQYVDENGITSTPVAKGEPGAPTIQLPIPPG Mvan_4816|M.vanbaalenii_PYR-1 ETAASPASPTPAAGPGITLAQYIEENGIAETPVLRGDPGAPTINLPFPQG MSMEG_5456|M.smegmatis_MC2_155 AKAAPEPIAEGTSGPHYTIVDYIRDNGITEMPVHRGDPGTPVLDIPIPPG TH_0934|M.thermoresistible__bu TTTSAAQAGAQAGASGYTIVDYIRDHDIDETTARPGDPGAPNVSLPTPPG MLBr_00246|M.leprae_Br4923 ILSKSSTTTTTTPDKPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPTPPG MAB_1145c|M.abscessus_ATCC_199 GSASSTPESAAPPAKPASMNEYLHSVGVTVTPVSPESPANVRVDVPLPQG . . .: :*: . : . . :.:* * . Mb0598c|M.bovis_AF2122/97 WRLLP-ESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVL-QF Rv0583c|M.tuberculosis_H37Rv WRLLP-ESSRAPYGGIVYTQPADPNDPPTIVAILSKLTGDIDPAKVL-QF MMAR_0950|M.marinum_M WQLLP-EGSGAPYGGIAYTQPADPSDPPTIVAILSKLTGNVEAAKIL-EF MUL_0701|M.ulcerans_Agy99 WQLLP-EGSGAPYGGIAYTQPADPSDPPTIVAILSKLTGNVEAAKIL-EF MAV_4561|M.avium_104 WQLN--QNSGTSYGGIVQSQPADPSDPPTVSALFSKLTGDVDPAKII-QY Mflv_1917|M.gilvum_PYR-GCK WEPAGPQTPEGAYDALVLAG--PSPNKPTIVAFVDKLTGPVDTAKIL-EY Mvan_4816|M.vanbaalenii_PYR-1 WEAAGPRAPQGAYDAIIYTAGPPGAQPATIVAFVTKLTGNVDSAKII-EY MSMEG_5456|M.smegmatis_MC2_155 WADAGADTPEWAWSAMVSTDPAFADDPPMIIALMSRLTGDVDPAKIL-EY TH_0934|M.thermoresistible__bu WSNATDRAPGWAWAALVSGDPAVADDPPSIVVLMSKLTGDVDADRVL-EF MLBr_00246|M.leprae_Br4923 WS-----PYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFDPTQVI-KH MAB_1145c|M.abscessus_ATCC_199 WENLG--ALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEH * . . :* * .:. ::: :. Mb0598c|M.bovis_AF2122/97 APGELKNLPGFQG-SGDGSAATLGGFSAWQLGGSYSKNGKLRTVAQKTVV Rv0583c|M.tuberculosis_H37Rv APGELKNLPGFQG-SGDGSAATLGGFSAWQLGGSYSKNGKLRTVAQKTVV MMAR_0950|M.marinum_M APGELKNLPGYEG-SNNGSASTLSGFQAWQLGGSYTKNGKQRAVAQKTVV MUL_0701|M.ulcerans_Agy99 APGELKNLPGYEG-SNNGSASTLSGFQAWQLGGSYTKNGKQRAVAQKTVV MAV_4561|M.avium_104 APGEVQNLPGYSG-SGDGSASTLGGYQAWQLGGTYQRGGKTRVIAQKTVV Mflv_1917|M.gilvum_PYR-GCK APNETIALPGFEG-ATEGKPSTLSGFDATQIGGFYTRDGVTRMLAQKTTV Mvan_4816|M.vanbaalenii_PYR-1 APNETRNLPGFEG-ADKGEPSNLGGFDATQIGGFYTKDGVNHLVAQKTVV MSMEG_5456|M.smegmatis_MC2_155 APNEIKNLPGYDGEGSEGTADELSGFDAYQIGGMYVRDGQQRLIAQKTVV TH_0934|M.thermoresistible__bu APAELRNLPGFDG--GAGTATTLSGFDAVQIGGRYDKDGVERVVGQKTVV MLBr_00246|M.leprae_Br4923 GNDDAQLFENFRQ--LDVSTANYNGFPSAMIQGSYDLEGRRLHAWNRIVI MAB_1145c|M.abscessus_ATCC_199 GFADAQNTQNFQK--IASSLDDYQGYPSAAIEGTYENQGVRVHAWNRDVI . : .: *: : : * * * :: .: Mb0598c|M.bovis_AF2122/97 IPSQG---AVFVLQLNADALDDETMTLMDAANVIDEQTTITP- Rv0583c|M.tuberculosis_H37Rv IPSQG---AVFVLQLNADALDDETMTLMDAANVIDEQTTITP- MMAR_0950|M.marinum_M IPSQD---GLFVLQLDADALDSEQDVLMDATGVIDDQTKITP- MUL_0701|M.ulcerans_Agy99 IPSQD---GLFVLQLDADALDSEQDVLMDATGVIDDQTKITP- MAV_4561|M.avium_104 IPSQG---AVYVLQLNADGLESDQGPLMDATHIIDEQTTITG- Mflv_1917|M.gilvum_PYR-GCK IPTDG---AVFVLKVTAEGTDDFAMPLMDATAAIDEQTTITP- Mvan_4816|M.vanbaalenii_PYR-1 IPAQD---GLFVLKLIADGTEEVAYPLMEATSAIDEQTTITP- MSMEG_5456|M.smegmatis_MC2_155 IPGQD---GLYVLQLNADGTEDQLGTLLDATSVIDEKTVITP- TH_0934|M.thermoresistible__bu IPAAD---AVYVMQLNADAPAEHAEQLLNATRFLDEQTRITF- MLBr_00246|M.leprae_Br4923 PTGPPPSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK MAB_1145c|M.abscessus_ATCC_199 VPDGP---LHYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR . ::::. : : ::