For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTPVSPESPANVRV DVPLPQGWENLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEHGFADAQNTQNFQKIA SSLDDYQGYPSAAIEGTYENQGVRVHAWNRDVIVPDGPLHYLVQFTVTTTEAQSAALSQDVAALTGGLKI TKR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1145c | - | - | 100% (214) | putative lipoprotein LpqT precursor |
M. abscessus ATCC 19977 | MAB_4924 | - | 7e-20 | 31.96% (219) | hypothetical protein MAB_4924 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1044c | lpqT | 1e-21 | 34.05% (185) | putative lipoprotein LpqT |
M. gilvum PYR-GCK | Mflv_1941 | - | 3e-26 | 32.26% (217) | putative lipoprotein |
M. tuberculosis H37Rv | Rv1016c | lpqT | 7e-26 | 32.14% (224) | lipoprotein LpqT |
M. leprae Br4923 | MLBr_00246 | lpqT | 7e-31 | 34.11% (214) | putative lipoprotein |
M. marinum M | MMAR_4470 | lpqT | 2e-25 | 29.86% (221) | lipoprotein LpqT |
M. avium 104 | MAV_1154 | - | 9e-31 | 34.86% (218) | LpqT protein |
M. smegmatis MC2 155 | MSMEG_5429 | - | 7e-30 | 33.18% (217) | LpqT protein |
M. thermoresistible (build 8) | TH_0908 | lpqT | 8e-25 | 34.11% (214) | PROBABLE CONSERVED LIPOPROTEIN LPQT |
M. ulcerans Agy99 | MUL_4640 | lpqT | 2e-25 | 29.86% (221) | lipoprotein LpqT |
M. vanbaalenii PYR-1 | Mvan_4785 | - | 9e-27 | 33.18% (223) | putative lipoprotein |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5429|M.smegmatis_MC2_155 MTIV---------AAVMSVLT-----VASCGA-ETPDYQSIWTTTTTTTT TH_0908|M.thermoresistible__bu MSAARY-------AVALTLLAG---ALAGCGD-DIPDYQSIWTTTHTSAA Mflv_1941|M.gilvum_PYR-GCK MRLWLT-------IALAAA-----LALTPCTT-ETPDYQSIWSTTSATPT Mvan_4785|M.vanbaalenii_PYR-1 MTVRLR-------PALAAAAILAVPALSGCAA-ETPDYQSVWSTASTTSA Mb1044c|M.bovis_AF2122/97 MAGRRCPQDSVRPLAVAVAVATLAMSAVACGP-KSPDFQSILSTSPTTSA Rv1016c|M.tuberculosis_H37Rv MAGRRCPQDSVRPLAVAVAVATLAMSAVACGP-KSPDFQSILSTSPTTSA MLBr_00246|M.leprae_Br4923 MQAIRL------GLHTAAAVVTLSISAVSCGT-KTPDYQLILSKSSTTTT MAV_1154|M.avium_104 MNRLR-------GCAAVAAAVALAVATAGCAP-KPPDYQSILSKTPTTTT MMAR_4470|M.marinum_M MTARR--------IAAAVVSLAVTMPAVACSTPEPPDYKSIWTTSATTST MUL_4640|M.ulcerans_Agy99 MTARR--------IAAAVVSLAVTMPAVACSTPEPPDYKSIWTTSATTST MAB_1145c|M.abscessus_ATCC_199 -----------MRSAALAAAAVAAFAMIGCGS-HNPGQPTGSASSTPESA * . *. :.: . .: MSMEG_5429|M.smegmatis_MC2_155 TPS----GEPPVPLWQHLESNGIVGEPVAPEKIPDLTVSMPTPPGWHPYN TH_0908|M.thermoresistible__bu PTS----QEP-VPIHQYLESVGVVGRPVPPDEVRDFTITLPTPPGWQPYH Mflv_1941|M.gilvum_PYR-GCK SPSAAADSAEPMSIATFLEQAGVAGQPVAPDKLTDLTVSMPTPKGWEPYR Mvan_4785|M.vanbaalenii_PYR-1 APTSTDPDAPPMSIATFLEQSGVTGQPVAPDKLTDLTVSMQTPPGWHPYQ Mb1044c|M.bovis_AF2122/97 VSTTT---EVPVPLWKYLESVGVTGEPVAPSSLTDLTVSIPTPPGWAPMK Rv1016c|M.tuberculosis_H37Rv VSTTT---EVPVPLWKYLESVGVTGEPVAPSSLTDLTVSIPTPPGWAPMK MLBr_00246|M.leprae_Br4923 TTPD-----KPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPTPPGWSPYS MAV_1154|M.avium_104 TTSAT---AKPVPLSQYLQSIGVTGQQVAPASLPDLTVSIPTPPGWAPFS MMAR_4470|M.marinum_M TATT----APPVPLSQYLESIGVSGKQIAPSDLKGLTVSIPTPPGWSPYE MUL_4640|M.ulcerans_Agy99 TATT----APPVPLSQYLESIGVSGKQIAPSDLKGLTVSIPTPPGWSPYE MAB_1145c|M.abscessus_ATCC_199 APP-----AKPASMNEYLHSVGVTVTPVSPESPANVRVDVPLPQGWENLG .. .: .*.. *: :.* . .. : : * ** MSMEG_5429|M.smegmatis_MC2_155 NPN---LAPFTRMIAKGDTYPTAMLLAFKLYGDFDVKAALRDHGYADAQL TH_0908|M.thermoresistible__bu NPN---FAPGTRVIAKGDTYPIAMLMVFELTGDFDVARAI-EHGHADAER Mflv_1941|M.gilvum_PYR-GCK NSN---LSPGTRMIAKGETYPTAMLIVFELNGDFDVAQAL-SHANTDAET Mvan_4785|M.vanbaalenii_PYR-1 NSN---LAPGTRVIAKGDTYPTAMLMVFELDGDFDVAEAL-THANVDAQA Mb1044c|M.bovis_AF2122/97 NPN---ITPNTEMIAKGESYPTAMLMVFKLHRDFDIAEAL-KHGTADARL Rv1016c|M.tuberculosis_H37Rv NPN---ITPNTEMIAKGESYPTAMLMVFKLHRDFDIAEAL-KHGTADARL MLBr_00246|M.leprae_Br4923 NPN---ITPETLIIAKSGKYPTARLVAFKLRGDFDPTQVI-KHGNDDAQL MAV_1154|M.avium_104 SPN---ISPQTVMISKGGKFPTARLVVFKLSGDFDPAQVI-KHGNDDAQL MMAR_4470|M.marinum_M GPK---INPETVIISKGGHYPTARLVVFLLRGNFDPADVA-RRGNDDAQL MUL_4640|M.ulcerans_Agy99 GPK---INPETVIISKGGHYPTARLVVFLLRGNFDPADVA-RRGNDDAQL MAB_1145c|M.abscessus_ATCC_199 ALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEHGFADAQN . : . . :. * * : : * :* . :. **. MSMEG_5429|M.smegmatis_MC2_155 SENFKQLNASLDDWRGFPSAMIEGSYDLNGRRMQSYNRVVIPTTEQAPPQ TH_0908|M.thermoresistible__bu SQNFKRLNASNENWRGFPSSMIEGSYDLNGRRMQSYNRIVIPTGPPPERQ Mflv_1941|M.gilvum_PYR-GCK SENFTELNTSTADFGGFPSSMIEGSYDLSGTRMHSYNRIVIATGAPPTSQ Mvan_4785|M.vanbaalenii_PYR-1 SENFRELNASTADFNGFPSSMIEGSYDLNGTRMHSYNRIVIATGAPPDRQ Mb1044c|M.bovis_AF2122/97 STNFTELDSSTADFNGFPSSMIQGSYDLHGRRLHTWNRIVFPTGAGQAAL Rv1016c|M.tuberculosis_H37Rv STNFTELDSSTADFNGFPSSMIQGSYDLHGRRLHTWNRIVFPTGAPPAKQ MLBr_00246|M.leprae_Br4923 FENFRQLDVSTANYNGFPSAMIQGSYDLEGRRLHAWNRIVIPTGPPPSKQ MAV_1154|M.avium_104 FENFKQLDASGAPYNGFPSSMIQGSYDLDGMRLHSWNRIVIATGSPPAHQ MMAR_4470|M.marinum_M FENFKQLDASSADFHGFPSSMMQGSYDLEGARMHSWNRIVIPTGPPPDNQ MUL_4640|M.ulcerans_Agy99 FENFKQLDASSADFHGFPSSMMQGSYDLEGARMHSWNRIVIPTGPPPDNQ MAB_1145c|M.abscessus_ATCC_199 TQNFQKIASSLDDYQGYPSAAIEGTYENQGVRVHAWNRDVIVPDGP---L ** .: * : *:**: ::*:*: * *::::** *: . MSMEG_5429|M.smegmatis_MC2_155 RYLIQLTVTTYAE--QAEAQAEDIEAIIAG-----FTVAKK--------- TH_0908|M.thermoresistible__bu RYLIQLTVTSFAE--DAAEHGPDIETIIRD-----FSVAPK--------- Mflv_1941|M.gilvum_PYR-GCK RYLVQFTVTGYAD--KAAEEAPDIEEIIRG-----FTVKVP--------- Mvan_4785|M.vanbaalenii_PYR-1 RYLVQFTVTGFAD--KAAEDGPDVESVIRG-----LTVALPR-------- Mb1044c|M.bovis_AF2122/97 PGAAHHHESGQRGRQARFRHRGDHRRIRRRGKVIVRTVGAQLSEQLTRIE Rv1016c|M.tuberculosis_H37Rv RYLVQLTITSLAN--EAVKHASDIEAIIAG-----FVVAAK--------- MLBr_00246|M.leprae_Br4923 QYLVQLTITSLAN--EAVAQSNDIEAIIRG-----FVVAPK--------- MAV_1154|M.avium_104 RYLVQLTITSLAD--QAAAESTDIEAIIHG-----FVVAAK--------- MMAR_4470|M.marinum_M RYLVQLTITSLAS--QAAGSASDIESIING-----FVVAVK--------- MUL_4640|M.ulcerans_Agy99 RYLVQLTITSLAS--QAAGSASDIESIING-----FVVAVK--------- MAB_1145c|M.abscessus_ATCC_199 HYLVQFTVTTTEA--QSAALSQDVAALTGG-----LKITKR--------- : : * : : MSMEG_5429|M.smegmatis_MC2_155 ---------- TH_0908|M.thermoresistible__bu ---------- Mflv_1941|M.gilvum_PYR-GCK ---------- Mvan_4785|M.vanbaalenii_PYR-1 ---------- Mb1044c|M.bovis_AF2122/97 FPQCSSHGLA Rv1016c|M.tuberculosis_H37Rv ---------- MLBr_00246|M.leprae_Br4923 ---------- MAV_1154|M.avium_104 ---------- MMAR_4470|M.marinum_M ---------- MUL_4640|M.ulcerans_Agy99 ---------- MAB_1145c|M.abscessus_ATCC_199 ----------