For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NIISAYHQVGSYRGAAELCGTTHKTVKRVIERAEAGGAPPREPRPRNLDAFTDLVATRVEKSHGKMSAKR MLPIARAAGYQGSARNFRRLVAEQKVLWRNANRHQRRPAVWSPGDYLVMDWAEAAPGLMVFCAVLAYSRW RFVRFAADEKASTTLAMIAEALEAIGGVPAKILADRMGCLKGGVVANVVVPTPDYVRFASHYGFVPDFCH GADPQSKGIVENLCGYAQDDLAVPLLTEAALAGEQVDLRALNAQAQLWCAEVNATVHSEICAVPNDRLVD ERTVLRELPSLRPTIGSGSVRRKVDGLSCIRYGSARYSVPQRLVGATVAVVVDHGALILLEPATGVIVAE HELVSPGEVSILDEHYDGPRPAPSRGPRPKTQAEKRFCALGTEAQQFLVGAAAIGNTRLKSELDILLGLG AAHGEQALIDALRRAVAFRRFRAADVRSILAAGAGTPQPRPAGDALVLDLPTVETRSLEAYKINTTDGTA S*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3533 | - | - | 100% (492) | transposase |
M. avium 104 | MAV_2691 | - | 0.0 | 100.00% (492) | transposase |
M. avium 104 | MAV_2675 | - | 0.0 | 100.00% (492) | transposase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2968 | - | 3e-13 | 25.57% (352) | IS1533 transposase |
M. gilvum PYR-GCK | Mflv_2877 | - | 0.0 | 75.40% (496) | integrase catalytic subunit |
M. tuberculosis H37Rv | Rv2943 | - | 3e-13 | 25.57% (352) | IS1533 transposase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_4229 | - | 5e-06 | 23.32% (373) | PUTATIVE putative acyl-CoA synthase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3894 | - | 0.0 | 73.72% (487) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment Mb2968|M.bovis_AF2122/97 -----------MLTVEDWAEIR-----RLHRAEGLPIKMIARVLGISKNT Rv2943|M.tuberculosis_H37Rv -----------MLTVEDWAEIR-----RLHRAEGLPIKMIARVLGISKNT Mflv_2877|M.gilvum_PYR-GCK -----------MDIISAYQQLG-----SYRAAAAECGTTHRTVKKVVKKF Mvan_3894|M.vanbaalenii_PYR-1 -----------MDIISAYQQLG-----SYRAAAAECGTTHRTVKRVVDKF MAV_3533|M.avium_104 -----------MNIISAYHQVG-----SYRGAAELCGTTHKTVKRVIERA TH_4229|M.thermoresistible__bu MAFREVNVNEIREVLRLWLGVAGLPAPGLRTIAAHCGLDRKTVRRYVQAA : : : : * . Mb2968|M.bovis_AF2122/97 VKSALESNQQPKYERAP-QGSIVDAVEPRIRELLQAYPTMPATVIAERIG Rv2943|M.tuberculosis_H37Rv VKSALESNQQPKYERAP-QGSIVDAVEPRIRELLQAYPTMPATVIAERIG Mflv_2877|M.gilvum_PYR-GCK EADQAGVPPLPRAERAHNYDAVADLVAERVDKSKGRISAKRLLPKARAAG Mvan_3894|M.vanbaalenii_PYR-1 EADQAGVRPPPRAERAHNYDTVSGLVAERVDKSKGRISAKRLLPKARAAG MAV_3533|M.avium_104 EAGGA----PPREPRPRNLDAFTDLVATRVEKSHGKMSAKRMLPIARAAG TH_4229|M.thermoresistible__bu HAAGLRRDDDASVIDDGLIGAVAEAVRPVRPHGHGAAWEQLLAFEGQIRA . .:. * . .. . Mb2968|M.bovis_AF2122/97 WER--------SIRVLSARVAELRPVYLPPDPASRTTYVA-----GEIAQ Rv2943|M.tuberculosis_H37Rv WER--------SIRVLSARVAELRPVYLPPDPASRTTYVA-----GEIAQ Mflv_2877|M.gilvum_PYR-GCK YTG--------SDRNFRRLVAEAKALWRSENHRGRRP------------- Mvan_3894|M.vanbaalenii_PYR-1 YRG--------SDRNFRRLVAEAKALWRSENHRGRRP------------- MAV_3533|M.avium_104 YQG--------SARNFRRLVAEQKVLWRNANRHQRRP------------- TH_4229|M.thermoresistible__bu WVAGDGEQRPLTITKIHTLLARQGCVVPYRTLHRFASERCGFGRKGTTVR : : : :*. : . Mb2968|M.bovis_AF2122/97 CDFWFPPIELPVGF--------GQTRTAKQLPVLTMVCAYSRWLLAMLLP Rv2943|M.tuberculosis_H37Rv CDFWFPPIELPVGF--------GQTRTAKQLPVLTMVCAYSRWLLAMLLP Mflv_2877|M.gilvum_PYR-GCK -AVWEPGEYLVIDW--------AQAAPG--LFLFCAVLAFSRWRFVRFAT Mvan_3894|M.vanbaalenii_PYR-1 -AVWEPGEYLVIDW--------AQAAPG--LFLFCAVLAFSRWRFVRFAA MAV_3533|M.avium_104 -AVWSPGDYLVMDW--------AEAAPG--LMVFCAVLAYSRWRFVRFAA TH_4229|M.thermoresistible__bu VADGDPGVECQIDFGYLGMLTDATDGRRRKVHALIFTAVYSRHMFVWLTY * :.: . : : . .:** :. : Mb2968|M.bovis_AF2122/97 SRCAEDLFAGWWRLIEALGAVPRVLVWDGEGAIG-RWRGGRSELTTECQA Rv2943|M.tuberculosis_H37Rv SRCAEDLFAGWWRLIEALGAVPRVLVWDGEGAIG-RWRGGRSELTTECQA Mflv_2877|M.gilvum_PYR-GCK DERASTTLALIAETLSAAGGVPAKVLADRMACLKGGVVANVVVPTPDYVR Mvan_3894|M.vanbaalenii_PYR-1 NERASTTLALIAEALAAAGGVPAKVLADRMACLKGGVVANVVVPTPDYVR MAV_3533|M.avium_104 DEKASTTLAMIAEALEAIGGVPAKILADRMGCLKGGVVANVVVPTPDYVR TH_4229|M.thermoresistible__bu SQTLAAVIAGCQAAWAFFGGVFAVLIPDNLKPVIASADALNPQFTRGWLD .. :* *.* :: * : . * Mb2968|M.bovis_AF2122/97 FRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLP-----GRVFASPAD Rv2943|M.tuberculosis_H37Rv FRGTLAAKVLICRPADPEAKGLIERAHDYLERSFLP-----GRVFASPAD Mflv_2877|M.gilvum_PYR-GCK LASHYGFAPDFCHASDPQSKGIVENLCGYAQDDLAVPLLTEAAVTGTPID Mvan_3894|M.vanbaalenii_PYR-1 LAGHYGFAPDFCHASDPHFKGIVENLCGYAQDDLAVPLLTEAAVTATPIT MAV_3533|M.avium_104 FASHYGFVPDFCHGADPQSKGIVENLCGYAQDDLAVPLLTEAALAGEQVD TH_4229|M.thermoresistible__bu YAGHGGFLTDPARVRSPKDKPRVERVVQYVRRNFWDG--------ETFSS . . .: .*. * :*. * . .: Mb2968|M.bovis_AF2122/97 F---NAQLGAWLALVN-TRTRRALGCAPTDRIGADRAAMLSLPPVAPATG Rv2943|M.tuberculosis_H37Rv F---NAQLGAWLALVN-TRTRRALGCAPTDRIGADRAAMLSLPPVAPATG Mflv_2877|M.gilvum_PYR-GCK LRDANAAAEVWCAEVN-AATHSEICAIPDERLITERELLAPLPSLRLQIG Mvan_3894|M.vanbaalenii_PYR-1 LRAANAAAVAWCAEVN-TRVHSEIHAIPDERLIVERELLQPLPSLRLQIG MAV_3533|M.avium_104 LRALNAQAQLWCAEVN-ATVHSEICAVPNDRLVDERTVLRELPSLRPTIG TH_4229|M.thermoresistible__bu LDEAQHVATVWCERTAGTRIHGTTCARPLEVFTAEEQPLLLAMPGVYDVP : : * . : : . * : : :. : . Mb2968|M.bovis_AF2122/97 WCTSLR-LPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFC--DGE Rv2943|M.tuberculosis_H37Rv WCTSLR-LPRDHYVRCDSNDYSVHPGVIGHRVLVRADLERVHVFC--DGE Mflv_2877|M.gilvum_PYR-GCK APSVLRKVDRLSCVRYGSARYSVPTRLIGTTVAVVVDHGALCLLEPATGV Mvan_3894|M.vanbaalenii_PYR-1 AASVLRKVDRLSCVRYGSARYSVPMRLIGTAVAVVVDHGAIVLLEPATGA MAV_3533|M.avium_104 SGSVRRKVDGLSCIRYGSARYSVPQRLVGATVAVVVDHGALILLEPATGV TH_4229|M.thermoresistible__bu VFKAVK-VHRDFHAEVAKALYSLPECWIGTTLDVRADGELVKFYHRGTLV . : : . . **: :* : * .* : . Mb2968|M.bovis_AF2122/97 LVADHERIWAVHQTVSDPAH------------------------------ Rv2943|M.tuberculosis_H37Rv LVADHERIWAVHQTVSDPAH------------------------------ Mflv_2877|M.gilvum_PYR-GCK IVAEHELVAPGGVSILDEHYDGPRPAPDRGPRPKTTVEKQFCDLGADAQA Mvan_3894|M.vanbaalenii_PYR-1 IVAEHELLAPGAVSILDEHYDGPRPAPSRGPRPKTTVEKQFCELGEDAQA MAV_3533|M.avium_104 IVAEHELVSPGEVSILDEHYDGPRPAPSRGPRPKTQAEKRFCALGTEAQQ TH_4229|M.thermoresistible__bu KVHPRQPAGGRSTDRGDLPEHKAGYALRDLAALIAACAAHGPNIGIYAER * :: * Mb2968|M.bovis_AF2122/97 -----------------------------------VEAAKVLRRRHFSAA Rv2943|M.tuberculosis_H37Rv -----------------------------------VEAAKVLRRRHFSAA Mflv_2877|M.gilvum_PYR-GCK FLVGAAAIGNTRLASELEVLLALGAAHGTDALVSALHRAVAFRRFRAADV Mvan_3894|M.vanbaalenii_PYR-1 FLIGAAAIGNTRLGSELEVLLALGAAHGTDALTAALHRAVAFRRFRAADV MAV_3533|M.avium_104 FLVGAAAIGNTRLKSELDILLGLGAAHGEQALIDALRRAVAFRRFRAADV TH_4229|M.thermoresistible__bu ILDDPLPWTRMRTVYRLLGLVRRYGAQRVEAACSLSLDLDVVSVTKIASM .. : : Mb2968|M.bovis_AF2122/97 SPVVEPQVQVRSLSDYDDALGVDIDGGVA-------------------- Rv2943|M.tuberculosis_H37Rv SPVVEPQVQVRSLSDYDDALGVDIDGGVA-------------------- Mflv_2877|M.gilvum_PYR-GCK RSILAAGTGTPQPRPAGDALILDLPVAPTRSLDAYKIS-VVDGEATS-- Mvan_3894|M.vanbaalenii_PYR-1 RSILAVGTGAPQPRPAGDALILDLPVAPTRSLDAYKFTPAVDGEVIQ-- MAV_3533|M.avium_104 RSILAAGAGTPQPRPAGDALVLDLPTVETRSLEAYKIN-TTDGTAS--- TH_4229|M.thermoresistible__bu LERATETCAPALPRAVGQEATRFSRDPSEFSSTPTPLTVISHSESEETR .: