For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RGSAVPSLVRTAARAGGKRLGAVWFNLLQTSLAAGLSWYLAHDVLDHPQPFFAPIAAAVSLSTSNVLRAQ RAVQMMIGVTLGIGLGTVVQGMLGPGALPIAVAALVALGAAVFIGGGFIGHGMMFANQTVVSALLVLALY RGGAGPERIFDALIGGAVAIVVAVLLFPADPRTVLGAARAGVLAVLHDVLSRAADVSSGRRAAPPDWPLS AVDRVHEQLSGLLEARTTARHVVAIAPRRWGLRDAVRAADHQAVHVALLAGSVLQLARAVAPGPGDRQGQ PVSTVLLVLAAATALADRDPAGACVYLGSARRHAARLRSGDGGDREPHVALADAVGACVDDLQRVIDLRP G*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3441 | - | - | 100% (352) | hypothetical protein MAV_3441 |
M. avium 104 | MAV_4931 | - | 2e-70 | 45.07% (335) | hypothetical protein MAV_4931 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2601c | - | 4e-88 | 51.30% (347) | transmembrane alanine and valine and leucine rich protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2571c | - | 4e-88 | 51.30% (347) | transmembrane alanine and valine and leucine rich protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2160 | - | 1e-79 | 49.70% (338) | transmembrane alanine and valine and leucine rich protein |
M. smegmatis MC2 155 | MSMEG_0090 | - | 3e-06 | 25.24% (313) | hypothetical protein MSMEG_0090 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3048 | - | 6e-06 | 30.66% (137) | protein of unknown function DUF893, YccS/YhfK |
CLUSTAL 2.0.9 multiple sequence alignment Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 MLLTPAKLWRRAAERLRERDPEYDALRRAARAGVVLPIAAAIGFAVGGGS Mvan_3048|M.vanbaalenii_PYR-1 --------------MIKGLVQRSAMPDPAAVLRSLACVAAVAVVAVQWGP Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 QTPLFSIFGAVSLLITADFPGNRPARALAFAGLAFNGAVLIVLGTLIA-- Mvan_3048|M.vanbaalenii_PYR-1 QGSATAVVGAAAVAGATALQDSPRGRVTVVLLVTAVAGLAVLLGALTSGF Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 PHVWLSVVSMFVIGVVVSFSGVLSEVVAAGQRATLLLFVLPLCTPVGPIA Mvan_3048|M.vanbaalenii_PYR-1 SPLFVAVATLWCFGASMLWALGANPGLIGAASAALLVSAPPVTPTPTSVV Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 DRLLGWVIALVVCVPAALFLFPPRHHDELRRTAARVCRVLAYRLEGSASA Mvan_3048|M.vanbaalenii_PYR-1 VTWLLAVAGGLLQVWVISLWPPLRWRNQRKALVAAYR------------- Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 RDVNRAMNELYESFLGADYRPVALTAGSRALVRVVDDLGWISDRVTDSTG Mvan_3048|M.vanbaalenii_PYR-1 -------------SLAADARKISDGTVGGGPAADPEPLAALRTAFTAADG Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 EILGEMRDPVVRVLRDSAALLRIHDPARRAERSADLRAALEELRTVSQGT Mvan_3048|M.vanbaalenii_PYR-1 PSRRRPATYRGWYALPERIADTLTDVARLPARSDALALALAEAADTLAAV Mb2601c|M.bovis_AF2122/97 -------------------------------------------------- Rv2571c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2160|M.marinum_M -------------------------------------------------- MAV_3441|M.avium_104 -------------------------------------------------- MSMEG_0090|M.smegmatis_MC2_155 YREGIAAILGTPDDADAVEVGKALLVRRTIAATVAVTGRVIRNAALADAR Mvan_3048|M.vanbaalenii_PYR-1 ADTSRTGRVG----ADVAIGRFDSVAATVDGSESVVVQKLSTQLHEAVAM Mb2601c|M.bovis_AF2122/97 --------------MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGL Rv2571c|M.tuberculosis_H37Rv --------------MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGL MMAR_2160|M.marinum_M --------------MEISLLTRAADGSLAAVRQLRTALWPITQASVTAGL MAV_3441|M.avium_104 -----------MRGSAVPSLVRTAA--RAGGKRLGAVWFNLLQTSLAAGL MSMEG_0090|M.smegmatis_MC2_155 PVWARVLGRRLPETGSADWIMPETTAVAEIAKGFLSTRAVVLRNSLRTGL Mvan_3048|M.vanbaalenii_PYR-1 RLGDFVPSTPDAVRLRRPELRTSVRSAVDVMRSHLDRHSPVLRHAVRLAA : . : : : :: . Mb2601c|M.bovis_AF2122/97 AWYLT---HDVFNHPQAFFAPISAVVCMSATNVLRARRAQQMIVGVALGI Rv2571c|M.tuberculosis_H37Rv AWYLT---HDVFNHPQAFFAPISAVVCMSATNVLRARRAQQMIVGVALGI MMAR_2160|M.marinum_M AWFLT---HDVLDHPQPFFAPISAAVCMSATNVLRARRAVQMVGGVALGI MAV_3441|M.avium_104 SWYLA---HDVLDHPQPFFAPIAAAVSLSTSNVLRAQRAVQMMIGVTLGI MSMEG_0090|M.smegmatis_MC2_155 GLALAVAVTHVFPVEHGFWVVLGAMSVLRSSALTTGTRVVRAVAGTALGF Mvan_3048|M.vanbaalenii_PYR-1 AVAVGCVVDRYAEGAYGFWIPLTVLMVLRPETAHTYTRCVGRVAGTLVGI . : *: : . : . * : *. :*: Mb2601c|M.bovis_AF2122/97 VLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSA Rv2571c|M.tuberculosis_H37Rv VLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSA MMAR_2160|M.marinum_M VVGAGVQAVLGTGPTAMGVAVFAALSVAVLAVRGFVAQGLMFVNQTAVSA MAV_3441|M.avium_104 GLGTVVQGMLGPGALPIAVAALVALGAAVFIGGGFIGHGMMFANQTVVSA MSMEG_0090|M.smegmatis_MC2_155 VIGAVLIELVGVQPVVLWILLPIVAFGSAYVPEVASFIAGQAAFTMMVLI Mvan_3048|M.vanbaalenii_PYR-1 VTASAVLVILNPG-VAVSAVLALAAVGVACVLSGIGFIAMAAAVTAAAVF .: : ::. : . . . . Mb2601c|M.bovis_AF2122/97 VLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSARADV Rv2571c|M.tuberculosis_H37Rv VLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSARADV MMAR_2160|M.marinum_M VLVLVFAPTGDVVAERLFDALIGGGLALVVAMLLFPADPVRILRDARTGA MAV_3441|M.avium_104 LLVLALYRGG-AGPERIFDALIGGAVAIVVAVLLFPADPRTVLGAARAGV MSMEG_0090|M.smegmatis_MC2_155 NFNLIAPTGWQVGLIRIEDVVVGALVGIVVSILLWPRGARASVTKAIDAA Mvan_3048|M.vanbaalenii_PYR-1 LVDIGRPDMPPAVADPVLAVLFGGALALIAHVVLP-DDALTRLSQRAGEL . : . : .:.*. :.:: ::* .. : Mb2601c|M.bovis_AF2122/97 LAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMV Rv2571c|M.tuberculosis_H37Rv LAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMV MMAR_2160|M.marinum_M LAALHDTLVEVIKFIDNPGGAAPDWLLATFDRLHNQLGGLIEARATAVLV MAV_3441|M.avium_104 LAVLHDVLSRAADVSSGRRAAPPDWPLSAVDRVHEQLSGLLEARTTARHV MSMEG_0090|M.smegmatis_MC2_155 RAAGAELLEAAVLRVTRGASEEATDRVIALS-----HSALEASRTLDDTV Mvan_3048|M.vanbaalenii_PYR-1 LRTEIDYAATVIKAYVHELDDPAETMTSAWQR---------AFRARAAFE . : . : . *: Mb2601c|M.bovis_AF2122/97 ARRAPRRWGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPV Rv2571c|M.tuberculosis_H37Rv ARRAPRRWGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPV MMAR_2160|M.marinum_M SRRAPRRWAARDAIADIERQSARLGMLVSGVLNLVRAITRLPEQQVPRPV MAV_3441|M.avium_104 VAIAPRRWGLRDAVRAADHQAVHVALLAGSVLQLARAVAPGPGDRQGQPV MSMEG_0090|M.smegmatis_MC2_155 RHYLSESGGPSDQRAPIVRSATRAIRVRAAAELIADVVPPPLEAYQETRK Mvan_3048|M.vanbaalenii_PYR-1 ATTGAMRMESRELRHWLRSYRTALNAVTSSCTTLEDQLPAQPAVTANREF . . . : .. : :. Mb2601c|M.bovis_AF2122/97 HAVLTDLAAGTGLADADPTAANEHAAAARATASTLQSAACGSNE--VVRA Rv2571c|M.tuberculosis_H37Rv HAVLTDLAAGTGLADADPTAANEHAAAARATASTLQSAACGSNE--VVRA MMAR_2160|M.marinum_M RIALAELAAALAVADDEPAAAIAHAAAARDRAQELLSQARDRTE--VVLA MAV_3441|M.avium_104 STVLLVLAAATALADRDPAGACVYLGSARRHAARLRSGDGGDREPHVALA MSMEG_0090|M.smegmatis_MC2_155 TIEAHARIICARLTGEDTTSVFVPIGETFVLALRAEATGGDLAVSAALPL Mvan_3048|M.vanbaalenii_PYR-1 VLAVDEYVEALRGDPPTAASPWRVDCAELAAAEARLREAVRRHGPEEGPA .:. * Mb2601c|M.bovis_AF2122/97 DIVQACVTDLQRVIER-PGPSGMSA-- Rv2571c|M.tuberculosis_H37Rv DIVQACVTDLQRVIER-PGPSGMSA-- MMAR_2160|M.marinum_M DIVDACGVDLQRVIDV-PGGDH----- MAV_3441|M.avium_104 DAVGACVDDLQRVIDLRPG-------- MSMEG_0090|M.smegmatis_MC2_155 VTVAAHIGELELLYPQPVESVH----- Mvan_3048|M.vanbaalenii_PYR-1 RLLVAEVDTITRHVSAISVSPSPTSVR : * :