For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DLSETALAEAVGAARQAFARAGDLDALARLKTEHLGDRAPLALARQALGGVPKDQRADAGKRVNAARAQA QQAYDERLAELRAERDAAVLVAERIDVTLPSTRQPVGARHPITILAEHIADTFIAMGWELAEGPEVEAEQ FNFDALNFPADHPARSEQDTFYIAPEGSRQLLRTHTSPVQVRTLLARELPVYVISIGRTFRTDELDATHT PVFHQVEGLAVDRGLSMAHLRGTLDAFARAEFGPQARTRIRPHFFPFTEPSAEVDVWFVGKKGGAGWVEW GGCGMVHPNVLRAAGIDPDVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDMRFSLPFGVGA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3120 | pheS | - | 100% (342) | phenylalanyl-tRNA synthetase subunit alpha |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1676 | pheS | 1e-173 | 87.35% (340) | phenylalanyl-tRNA synthetase subunit alpha |
M. gilvum PYR-GCK | Mflv_3533 | pheS | 1e-171 | 84.21% (342) | phenylalanyl-tRNA synthetase subunit alpha |
M. tuberculosis H37Rv | Rv1649 | pheS | 1e-173 | 87.35% (340) | phenylalanyl-tRNA synthetase subunit alpha |
M. leprae Br4923 | MLBr_01401 | pheS | 1e-170 | 85.29% (340) | phenylalanyl-tRNA synthetase subunit alpha |
M. abscessus ATCC 19977 | MAB_2334 | pheS | 1e-161 | 81.12% (339) | phenylalanyl-tRNA synthetase alpha chain PheS |
M. marinum M | MMAR_2456 | pheS | 1e-176 | 88.89% (342) | phenylalanyl-tRNA synthetase, alpha chain PheS |
M. smegmatis MC2 155 | MSMEG_3778 | pheS | 1e-175 | 86.80% (341) | phenylalanyl-tRNA synthetase subunit alpha |
M. thermoresistible (build 8) | TH_1591 | pheS | 1e-172 | 85.04% (341) | Probable phenylalanyl-tRNA synthetase, alpha chain PheS |
M. ulcerans Agy99 | MUL_1635 | pheS | 1e-176 | 88.30% (342) | phenylalanyl-tRNA synthetase subunit alpha |
M. vanbaalenii PYR-1 | Mvan_3317 | pheS | 1e-174 | 85.96% (342) | phenylalanyl-tRNA synthetase subunit alpha |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3533|M.gilvum_PYR-GCK ---------MAEQPVD----LSDQALADAVSAVRRAFDGASTLEDLAKAK Mvan_3317|M.vanbaalenii_PYR-1 ---------MAEQPVD----LSDEALAQAVSAASRAFDQASTLDELAKAK MSMEG_3778|M.smegmatis_MC2_155 MVRTQGGETAGEQPSD----LSEEALTKAVSAARHAFDAAGDLDALARAK TH_1591|M.thermoresistible__bu -LAITYDRRVADRPLD----LSEEALTAVVSAAQRAFEQAADLDELSRAK MAV_3120|M.avium_104 --------------MD----LSETALAEAVGAARQAFARAGDLDALARLK Mb1676|M.bovis_AF2122/97 -------------------MLSPEALTTAVDAAQQAIALADTLDVLARVK Rv1649|M.tuberculosis_H37Rv -------------------MLSPEALTTAVDAAQQAIALADTLDVLARVK MLBr_01401|M.leprae_Br4923 ---------MGDQPVDL-SMLSSEALAKAVNTARQAIALAVNLDALALIK MMAR_2456|M.marinum_M ---------MGDQPVD----LSPQGLANVVKLAHQAFASADDLEALARAK MUL_1635|M.ulcerans_Agy99 ---------MGDQPVD----LSPQGLANVVKLAHQAFASADNLEALARAK MAB_2334|M.abscessus_ATCC_1997 ---------MADHTQHPSAESSAELLTTAVDAARAAFDTADNLDGLAQAK * *: .* . *: * *: *: * Mflv_3533|M.gilvum_PYR-GCK TEYLGDRSPIALARQALGSLPKTERADAGKRVNVARTEAQTAYDERLAVL Mvan_3317|M.vanbaalenii_PYR-1 TEHLGDRSPIALARQALGSLPKTDRADAGKRVNVARTQAQAGYDDRLAAL MSMEG_3778|M.smegmatis_MC2_155 TEHLGDRAPIALARQALASLPKADRADAGKRVNVARAEAQRAYDERLAVL TH_1591|M.thermoresistible__bu TEHLGDRSPIAQARQSLGTLPKSDRADAGKRVNFARAQVQRSYDERLAVL MAV_3120|M.avium_104 TEHLGDRAPLALARQALGGVPKDQRADAGKRVNAARAQAQQAYDERLAEL Mb1676|M.bovis_AF2122/97 TEHLGDRSPLALARQALAVLPKEQRAEAGKRVNAARNAAQRSYDERLATL Rv1649|M.tuberculosis_H37Rv TEHLGDRSPLALARQALAVLPKEQRAEAGKRVNAARNAAQRSYDERLATL MLBr_01401|M.leprae_Br4923 AEHLGDRSPLALARQALASLPKIDRAAVGKQVNTARSEVQRDYDERLATL MMAR_2456|M.marinum_M TEHLGDRSPLALARQSLGTLPKEQRADAGKAVNLARGDAQCSYDERLAVL MUL_1635|M.ulcerans_Agy99 TEHLGDRSPLALARQSLGTLPKEQRADAGKAVNLARGDAQCSYDERLAVL MAB_2334|M.abscessus_ATCC_1997 IDHLGEKSPLAQARQALGSLPKDQRAEAGKLVNAARTQAQQAYDDRLETL ::**:::*:* ***:*. :** :** .** ** ** .* **:** * Mflv_3533|M.gilvum_PYR-GCK RAERDAAVLVAERIDVTLPSTRQPVGARHPITILAERVADTFVAMGWELA Mvan_3317|M.vanbaalenii_PYR-1 RAERDAEVLVAERIDVTLPSTRQPVGARHPITILAENVADTFVAMGWELA MSMEG_3778|M.smegmatis_MC2_155 RAERDAAVLVAERIDVTLPSTRQPLGARHPITILAENIADTFVAMGWELA TH_1591|M.thermoresistible__bu RAERDAAALVAERIDVTLPSTRQPLGARHPITILAERIADTFVAMGWELA MAV_3120|M.avium_104 RAERDAAVLVAERIDVTLPSTRQPVGARHPITILAEHIADTFIAMGWELA Mb1676|M.bovis_AF2122/97 RAERDAAVLVAEGIDVTLPSTRVPAGARHPIIMLAEHVADTFIAMGWELA Rv1649|M.tuberculosis_H37Rv RAERDAAVLVAEGIDVTLPSTRVPAGARHPIIMLAEHVADTFIAMGWELA MLBr_01401|M.leprae_Br4923 QAERDAAVLVTERIDVTLPSTRQPTGARHPITILAEHIADTFIAMGWELV MMAR_2456|M.marinum_M RAERDAAVLVAERIDVTLPSTRQPTGARHPITILAEHIADTFIAMGWELA MUL_1635|M.ulcerans_Agy99 RAERDAAVLVAERIDVTLPSTRQPTGARHPITILAEHIADTFIAMGWELA MAB_2334|M.abscessus_ATCC_1997 RAERDAAVLVAERIDVTLPSTRQPLGARHPITILSENIADTFIAMGWEVA :***** .**:* ********* * ****** :*:*.:****:*****:. Mflv_3533|M.gilvum_PYR-GCK EGPEVETEQFNFDALNFPPDHPARSEQDTFQVAPDGSRQVLRTHTSPVQI Mvan_3317|M.vanbaalenii_PYR-1 EGPEVETEQFNFDALNFPPDHPARSEQDTFHIAPDGSRQVLRTHTSPVQV MSMEG_3778|M.smegmatis_MC2_155 EGPEVETEQFNFDALNFPPDHPARSEQDTFQIAPDGSRQVLRTHTSPVQI TH_1591|M.thermoresistible__bu EGPEVESEQFNFDALNFPQDHPARSEQDTFHVAPEGSRQVLRTHTSPVQI MAV_3120|M.avium_104 EGPEVEAEQFNFDALNFPADHPARSEQDTFYIAPEGSRQLLRTHTSPVQV Mb1676|M.bovis_AF2122/97 EGPEVETEQFNFDALNFPADHPARGEQDTFYIAPEDSRQLLRTHTSPVQI Rv1649|M.tuberculosis_H37Rv EGPEVETEQFNFDALNFPADHPARGEQDTFYIAPEDSRQLLRTHTSPVQI MLBr_01401|M.leprae_Br4923 DGPEVETEQFNFDALNFPADHPARSEQDTFYIAPDGSRQLLRTHTSPVQV MMAR_2456|M.marinum_M EGPEVETEQFNFDALNFPPDHPARSEQDTFYIAPEDSRQLLRTHTSPVQV MUL_1635|M.ulcerans_Agy99 EGPEVETEQFNFDALNFPPDHPARSEQDTFYIAPEDSRQLLRTHTSPVQV MAB_2334|M.abscessus_ATCC_1997 DGPEVETEHFNFDALNFLPDHPARSTQDTFYIAPEDSRQVLRTHTSPVQV :*****:*:******** *****. **** :**:.***:*********: Mflv_3533|M.gilvum_PYR-GCK RALLERELPVYIVSIGRTFRTDELDATHTPVFHQVEGLAVDKGLTMANLR Mvan_3317|M.vanbaalenii_PYR-1 RTLLERELPVYVISIGRTFRTDELDATHTPVFHQVEGLAVDKGLTMAHLR MSMEG_3778|M.smegmatis_MC2_155 RALLERDLPVYIISIGRTFRTDELDSTHTPVFHQVEGLAVDKGLTMAHLR TH_1591|M.thermoresistible__bu RALLERELPVYIISIGRTFRTDELDATHTPVFHQVEGLAVDKGLTMAHLR MAV_3120|M.avium_104 RTLLARELPVYVISIGRTFRTDELDATHTPVFHQVEGLAVDRGLSMAHLR Mb1676|M.bovis_AF2122/97 RTLLARELPVYIISIGRTFRTDELDATHTPIFHQVEGLAVDRGLSMAHLR Rv1649|M.tuberculosis_H37Rv RTLLARELPVYIISIGRTFRTDELDATHTPIFHQVEGLAVDRGLSMAHLR MLBr_01401|M.leprae_Br4923 RTLLERELPVYVISIGRAFRTDEVDATHTPVFHQVEGLAVDRGLSMAHLR MMAR_2456|M.marinum_M RTLLERELPVYIISIGRTFRTDELDATHTPVFHQVEGLAVDRGLTMAHLR MUL_1635|M.ulcerans_Agy99 RTLLERELPVYIISIGRTFRTDELDATHTPVFHQVEGLAVDRGLTMAHLR MAB_2334|M.abscessus_ATCC_1997 RTLLARELPVYVISLGRAFRTDEIDATHLPAFHQVEGLAVDRGLTLANLK *:** *:****::*:**:*****:*:** * **********:**::*:*: Mflv_3533|M.gilvum_PYR-GCK GTLDAFARSEFGPQGRTRFRPHFFPFTEPSAEVDIWFPDKKGGPGWVEWG Mvan_3317|M.vanbaalenii_PYR-1 GTLDAFARAQFGPQGRTRFRPHFFPFTEPSAEVDIWFPNKKGGPGWVEWG MSMEG_3778|M.smegmatis_MC2_155 GTLDAFARAQFGPEGRTRFRPHFFPFTEPSAEVDIWFPGKKGGPGWVEWG TH_1591|M.thermoresistible__bu GTLDAFARSEFGPHGRTRFRPHFFPFTEPSAEVDVWFEGKKGGPGWVEWG MAV_3120|M.avium_104 GTLDAFARAEFGPQARTRIRPHFFPFTEPSAEVDVWFVGKKGGAGWVEWG Mb1676|M.bovis_AF2122/97 GTLDAFARAEFGPSARTRIRPHFFPFTEPSAEVDVWFANKIGGADWVEWG Rv1649|M.tuberculosis_H37Rv GTLDAFARAEFGPSARTRIRPHFFPFTEPSAEVDVWFANKIGGAAWVEWG MLBr_01401|M.leprae_Br4923 GTLDIFARAEFGPSTRTRIRPHFFPFTEPSAEVDVWFASKKDGADWVEWG MMAR_2456|M.marinum_M GTLDAFARSEFGPLARTRIRPHFFPFTEPSAEVDVWFANKKGGADWVEWG MUL_1635|M.ulcerans_Agy99 GTLDAFARSEFGPLARTRIRPHFFPFTEPSAEVDVWFANKKGGADWVEWG MAB_2334|M.abscessus_ATCC_1997 GTLDAFARAMFGAQAHTRMRPHYFPFTEPSAEVDVWFENKKGGAGWVEWG **** ***: **. :**:***:***********:** .* .*. ***** Mflv_3533|M.gilvum_PYR-GCK GCGMVNPNVLRACGIDPEVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV Mvan_3317|M.vanbaalenii_PYR-1 GCGMVNPNVLRACGIDPEVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV MSMEG_3778|M.smegmatis_MC2_155 GCGMVNPNVLRACGIDPEVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV TH_1591|M.thermoresistible__bu GCGMVDPNVLRACGIDPDVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDI MAV_3120|M.avium_104 GCGMVHPNVLRAAGIDPDVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDM Mb1676|M.bovis_AF2122/97 GCGMVHPNVLRATGIDPDLYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV Rv1649|M.tuberculosis_H37Rv GCGMVHPNVLRATGIDPDLYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV MLBr_01401|M.leprae_Br4923 GCGMVHPNVLRATGIDPDIYSGFAFGMGLERTLQFRNSIPNMRDMVEGDV MMAR_2456|M.marinum_M GCGMVHPNVLRAAGIDPEVYSGFAFGMGLERTLQFRNGIPDMRDMVEGDV MUL_1635|M.ulcerans_Agy99 GCGMVHPNVLRAAGIDPEVYSGFAFGMGLERSLQFRNGIPDMRDMVEGDV MAB_2334|M.abscessus_ATCC_1997 GCGMVNPNVLRASGIDPGEYSGFAFGMGLERTLQFRNGLPDMRDMIEGDV *****.****** **** ************:*****.:*:****:***: Mflv_3533|M.gilvum_PYR-GCK RFSLPFGVGA Mvan_3317|M.vanbaalenii_PYR-1 RFSLPFGVGA MSMEG_3778|M.smegmatis_MC2_155 RFSLPFGVGA TH_1591|M.thermoresistible__bu RFSLPFGVGL MAV_3120|M.avium_104 RFSLPFGVGA Mb1676|M.bovis_AF2122/97 RFSLPFGVGA Rv1649|M.tuberculosis_H37Rv RFSLPFGVGA MLBr_01401|M.leprae_Br4923 RFSLPFGVGA MMAR_2456|M.marinum_M RFSLPFGVGA MUL_1635|M.ulcerans_Agy99 RFSLPFGVGA MAB_2334|M.abscessus_ATCC_1997 RFSLPFGVSA ********.