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TSDTIASSTSQYHRGLRDELSALRSQRSVEVPDDFMDYRPGRAARPSVRRNRIRVLEELLAAGPGSGDRA AQAVAAPGMVLTIRYDATGETETFLLGRRNGGGGRVKVYSMASPLGRSVAGARPGEQRIYAIPNDTGRVV TLLKVVPYAGGDSKPRSPQDIQRCADAGLADERRQA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1985 | - | - | 100% (177) | transcription elongation factor GreA |
| M. avium 104 | MAV_1984 | - | 2e-24 | 44.97% (149) | transcription elongation factor GreA |
| M. avium 104 | MAV_1204 | greA | 1e-12 | 34.64% (153) | transcription elongation factor GreA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1109c | greA | 3e-13 | 33.33% (162) | transcription elongation factor GreA |
| M. gilvum PYR-GCK | Mflv_1945 | - | 5e-22 | 41.22% (148) | GreA/GreB family elongation factor |
| M. tuberculosis H37Rv | Rv1080c | greA | 3e-13 | 33.33% (162) | transcription elongation factor GreA |
| M. leprae Br4923 | MLBr_02393 | greA | 5e-14 | 34.57% (162) | transcription elongation factor GreA |
| M. abscessus ATCC 19977 | MAB_1201c | greA | 2e-15 | 35.19% (162) | transcription elongation factor GreA |
| M. marinum M | MMAR_4387 | greA | 2e-12 | 32.10% (162) | transcription elongation factor GreA |
| M. smegmatis MC2 155 | MSMEG_6292 | - | 9e-22 | 42.03% (138) | transcription elongation factor GreA |
| M. thermoresistible (build 8) | TH_2139 | - | 2e-16 | 36.71% (158) | transcription elongation factor GreA |
| M. ulcerans Agy99 | MUL_0200 | greA | 2e-12 | 32.10% (162) | transcription elongation factor GreA |
| M. vanbaalenii PYR-1 | Mvan_4781 | - | 4e-22 | 46.23% (106) | GreA/GreB family elongation factor |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4387|M.marinum_M MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
MUL_0200|M.ulcerans_Agy99 MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
Mb1109c|M.bovis_AF2122/97 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
Rv1080c|M.tuberculosis_H37Rv MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MLBr_02393|M.leprae_Br4923 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MAB_1201c|M.abscessus_ATCC_199 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINERREEGDLRENGGY
MSMEG_6292|M.smegmatis_MC2_155 MNAPQRIWMSPQAHERLQQELSTLRELIATEAASDSD--------EN---
TH_2139|M.thermoresistible__bu MTT-QRIWLTQEGYERLQQELHTLQELVN--TAIDDD--------EN---
Mflv_1945|M.gilvum_PYR-GCK MQPADTIWMSPQTRESLEQELAALMAAPGPAGSDE---------------
Mvan_4781|M.vanbaalenii_PYR-1 MYTADYVWMTPQAREDLEKELADLMAVPNPAGTDETERTDQ---------
MAV_1985|M.avium_104 MTSDTIASSTSQYHRGLRDELSALRSQRSVEVPDDFMDYRPG--------
* : : *. ** * .
MMAR_4387|M.marinum_M HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
MUL_0200|M.ulcerans_Agy99 HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
Mb1109c|M.bovis_AF2122/97 HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
Rv1080c|M.tuberculosis_H37Rv HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
MLBr_02393|M.leprae_Br4923 HAAREEQGQQEARIRQLQDLLNIAKVGEAPKQSGVALPGSVVKVYYNDDK
MAB_1201c|M.abscessus_ATCC_199 HAAREEQGQQEARIRQLQELLNNAKVGEAPTQSGVALPGSVVKVYYDGDK
MSMEG_6292|M.smegmatis_MC2_155 --QVAVQRARQARIQQIHDLLLHAEVGETPPNDGVAEPGMVLTVRWDGS-
TH_2139|M.thermoresistible__bu --TLDVQRARLERIHEIHEILGNAVVGEAPPDDGVAEPGMVVTVSYDDDP
Mflv_1945|M.gilvum_PYR-GCK --VVDAWLARKERIRQIHELLTKAEHAVDPADDGVAEPGMVLTVRFDDA-
Mvan_4781|M.vanbaalenii_PYR-1 --VVDAWLARKERIRQIHELLSRADHSTSPADDGIAEPGMVLTVRFDDT-
MAV_1985|M.avium_104 --RAARPSVRRNRIRVLEELLAAGPGSGDRAAQAVAAPGMVLTIRYDAT-
: **: :.::* . . ..:* ** *:.: ::
MMAR_4387|M.marinum_M SDSETFLIATRQEGVNDG-KLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MUL_0200|M.ulcerans_Agy99 SDSETFLIATRQEGVNDG-KLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Mb1109c|M.bovis_AF2122/97 SDSETFLIATRQEGVSDG-KLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Rv1080c|M.tuberculosis_H37Rv SDSETFLIATRQEGVSDG-KLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MLBr_02393|M.leprae_Br4923 SDTETFLIATRQEGVNEG-KLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MAB_1201c|M.abscessus_ATCC_199 GDTETFLIATRQEGVKDG-KLEVYSPSSPLGGALIDAKVGETRSYTVPNG
MSMEG_6292|M.smegmatis_MC2_155 DDTETFLLGVR--GAEYG-DLEVYSVQSPLGSAILGARPGEHREYETPTG
TH_2139|M.thermoresistible__bu DDTETFLLGVR--GAEEADDLEVYSLDSPLGSAIAGARTGETRTYQVPSG
Mflv_1945|M.gilvum_PYR-GCK GDTETFLLGTR--ATVDS-ELDVYSVNSPMGSALLGATPGQQRSYQLPNG
Mvan_4781|M.vanbaalenii_PYR-1 GDTETFLLGTR--GTADP-ELEVYTVASPLGSALLGAVPGEQRSFRLPNG
MAV_1985|M.avium_104 GETETFLLGRR---NGGGGRVKVYSMASPLGRSVAGARPGEQRIYAIPND
.::****:. * :.**: **:* :: .* *: * : *..
MMAR_4387|M.marinum_M SVIEVTLISAEPY--HS------------------------
MUL_0200|M.ulcerans_Agy99 SVIEVTLISAEPY--HS------------------------
Mb1109c|M.bovis_AF2122/97 STVSVTLVSAEPY--HS------------------------
Rv1080c|M.tuberculosis_H37Rv STVSVTLVSAEPY--HS------------------------
MLBr_02393|M.leprae_Br4923 NTVQVTLISAEPY--HS------------------------
MAB_1201c|M.abscessus_ATCC_199 TEVQVTLVSAEPY--HE------------------------
MSMEG_6292|M.smegmatis_MC2_155 ARIGVTLLEAVPYGLHAQAVKATA-----------------
TH_2139|M.thermoresistible__bu ATVKVTLVSAVPYGSHHPTPAG-------------------
Mflv_1945|M.gilvum_PYR-GCK GTQQVTLLSAKPFAAHAREAVTAGSPQR-------------
Mvan_4781|M.vanbaalenii_PYR-1 SIQQVTVLAAKPFGAHDPRELAKR-----------------
MAV_1985|M.avium_104 TGRVVTLLKVVPYAGGDSKPRSPQDIQRCADAGLADERRQA
**:: . *: