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M. thermoresistible (build 8) TH_2139 (-)

annotation: transcription elongation factor GreA
coordinates: 4209934 - 4210398
length: 155

aa seq not available

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. thermoresistible (build 8) TH_2139 - - 100% (155) transcription elongation factor GreA
M. thermoresistible (build 8) TH_2169 greA 2e-34 52.20% (159) PROBABLE TRANSCRIPTION ELONGATION FACTOR GREA (Transcript

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1109c greA 2e-29 46.58% (161) transcription elongation factor GreA
M. gilvum PYR-GCK Mflv_1945 - 2e-31 48.95% (143) GreA/GreB family elongation factor
M. tuberculosis H37Rv Rv1080c greA 2e-29 46.58% (161) transcription elongation factor GreA
M. leprae Br4923 MLBr_02393 greA 2e-29 46.91% (162) transcription elongation factor GreA
M. abscessus ATCC 19977 MAB_1201c greA 8e-29 47.17% (159) transcription elongation factor GreA
M. marinum M MMAR_4387 greA 5e-28 44.10% (161) transcription elongation factor GreA
M. avium 104 MAV_1984 - 1e-42 60.00% (150) transcription elongation factor GreA
M. smegmatis MC2 155 MSMEG_6292 - 2e-46 64.63% (147) transcription elongation factor GreA
M. ulcerans Agy99 MUL_0200 greA 4e-28 44.10% (161) transcription elongation factor GreA
M. vanbaalenii PYR-1 Mvan_4781 - 1e-32 45.75% (153) GreA/GreB family elongation factor

CLUSTAL 2.0.9 multiple sequence alignment


MAV_1984|M.avium_104                MTSTQPAWISPQAHERLQRELATLR--------ELRDTSAVGSATDENSL
MSMEG_6292|M.smegmatis_MC2_155      MNAPQRIWMSPQAHERLQQELSTLR--------ELIATEAA-SDSDENQV
TH_2139|M.thermoresistible__bu      -MTTQRIWLTQEGYERLQQELHTLQ--------ELVNTAID---DDENTL
MMAR_4387|M.marinum_M               MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
MUL_0200|M.ulcerans_Agy99           MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
Mb1109c|M.bovis_AF2122/97           MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
Rv1080c|M.tuberculosis_H37Rv        MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MLBr_02393|M.leprae_Br4923          MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MAB_1201c|M.abscessus_ATCC_199      MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINERREEGDLRENGGY
Mflv_1945|M.gilvum_PYR-GCK          MQPADTIWMSPQTRESLEQELAALMA-------APGPAGSDE------VV
Mvan_4781|M.vanbaalenii_PYR-1       MYTADYVWMTPQAREDLEKELADLMA-------VPNPAGTDETERTDQVV
                                       .:  *:: :  : *: **  *                          

MAV_1984|M.avium_104                AVQR----AWQLRIHRIHDLLVNAVVGDDPPDDGVAEPGMVLTIRYDD-T
MSMEG_6292|M.smegmatis_MC2_155      AVQR----ARQARIQQIHDLLLHAEVGETPPNDGVAEPGMVLTVRWDG-S
TH_2139|M.thermoresistible__bu      DVQR----ARLERIHEIHEILGNAVVGEAPPDDGVAEPGMVVTVSYDDDP
MMAR_4387|M.marinum_M               HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
MUL_0200|M.ulcerans_Agy99           HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
Mb1109c|M.bovis_AF2122/97           HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
Rv1080c|M.tuberculosis_H37Rv        HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
MLBr_02393|M.leprae_Br4923          HAAREEQGQQEARIRQLQDLLNIAKVGEAPKQSGVALPGSVVKVYYNDDK
MAB_1201c|M.abscessus_ATCC_199      HAAREEQGQQEARIRQLQELLNNAKVGEAPTQSGVALPGSVVKVYYDGDK
Mflv_1945|M.gilvum_PYR-GCK          DAWL----ARKERIRQIHELLTKAEHAVDPADDGVAEPGMVLTVRFDD-A
Mvan_4781|M.vanbaalenii_PYR-1       DAWL----ARKERIRQIHELLSRADHSTSPADDGIAEPGMVLTVRFDD-T
                                     .          **:.::::*  *  .  * :.*:* ** *:.: ::.  

MAV_1984|M.avium_104                GEIETFLLSVR--GAEY-DGTEVYSIRSPLGAAIAGARPGEQRSYILPNG
MSMEG_6292|M.smegmatis_MC2_155      DDTETFLLGVR--GAEY-GDLEVYSVQSPLGSAILGARPGEHREYETPTG
TH_2139|M.thermoresistible__bu      DDTETFLLGVR--GAEEADDLEVYSLDSPLGSAIAGARTGETRTYQVPSG
MMAR_4387|M.marinum_M               SDSETFLIATRQEGVND-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MUL_0200|M.ulcerans_Agy99           SDSETFLIATRQEGVND-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Mb1109c|M.bovis_AF2122/97           SDSETFLIATRQEGVSD-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Rv1080c|M.tuberculosis_H37Rv        SDSETFLIATRQEGVSD-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MLBr_02393|M.leprae_Br4923          SDTETFLIATRQEGVNE-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MAB_1201c|M.abscessus_ATCC_199      GDTETFLIATRQEGVKD-GKLEVYSPSSPLGGALIDAKVGETRSYTVPNG
Mflv_1945|M.gilvum_PYR-GCK          GDTETFLLGTR--ATVD-SELDVYSVNSPMGSALLGATPGQQRSYQLPNG
Mvan_4781|M.vanbaalenii_PYR-1       GDTETFLLGTR--GTAD-PELEVYTVASPLGSALLGAVPGEQRSFRLPNG
                                    .: ****:..*  ..      :**:  **:*.*: .*  *: * :  *.*

MAV_1984|M.avium_104                APLTVTLLKAVPYGVHLAGSS-------
MSMEG_6292|M.smegmatis_MC2_155      ARIGVTLLEAVPYGLHAQAVKATA----
TH_2139|M.thermoresistible__bu      ATVKVTLVSAVPYGSHHPTPAG------
MMAR_4387|M.marinum_M               SVIEVTLISAEPYHS-------------
MUL_0200|M.ulcerans_Agy99           SVIEVTLISAEPYHS-------------
Mb1109c|M.bovis_AF2122/97           STVSVTLVSAEPYHS-------------
Rv1080c|M.tuberculosis_H37Rv        STVSVTLVSAEPYHS-------------
MLBr_02393|M.leprae_Br4923          NTVQVTLISAEPYHS-------------
MAB_1201c|M.abscessus_ATCC_199      TEVQVTLVSAEPYHE-------------
Mflv_1945|M.gilvum_PYR-GCK          GTQQVTLLSAKPFAAHAREAVTAGSPQR
Mvan_4781|M.vanbaalenii_PYR-1       SIQQVTVLAAKPFGAHDPRELAKR----
                                        **:: * *:

species	id	gene	e-value	identity (len)	annotation
M. thermoresistible (build 8)	TH_2139	-	-	100% (155)	transcription elongation factor GreA
M. thermoresistible (build 8)	TH_2169	greA	2e-34	52.20% (159)	PROBABLE TRANSCRIPTION ELONGATION FACTOR GREA (Transcript