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TSTQPAWISPQAHERLQRELATLRELRDTSAVGSATDENSLAVQRAWQLRIHRIHDLLVNAVVGDDPPDD GVAEPGMVLTIRYDDTGEIETFLLSVRGAEYDGTEVYSIRSPLGAAIAGARPGEQRSYILPNGAPLTVTL LKAVPYGVHLAGSS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1984 | - | - | 100% (155) | transcription elongation factor GreA |
| M. avium 104 | MAV_1985 | - | 1e-24 | 44.97% (149) | transcription elongation factor GreA |
| M. avium 104 | MAV_1204 | greA | 1e-21 | 38.71% (155) | transcription elongation factor GreA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1109c | greA | 5e-24 | 39.51% (162) | transcription elongation factor GreA |
| M. gilvum PYR-GCK | Mflv_1945 | - | 1e-33 | 49.66% (149) | GreA/GreB family elongation factor |
| M. tuberculosis H37Rv | Rv1080c | greA | 5e-24 | 39.51% (162) | transcription elongation factor GreA |
| M. leprae Br4923 | MLBr_02393 | greA | 1e-23 | 39.51% (162) | transcription elongation factor GreA |
| M. abscessus ATCC 19977 | MAB_1201c | greA | 6e-24 | 38.92% (167) | transcription elongation factor GreA |
| M. marinum M | MMAR_4387 | greA | 2e-23 | 38.89% (162) | transcription elongation factor GreA |
| M. smegmatis MC2 155 | MSMEG_6292 | - | 8e-51 | 65.33% (150) | transcription elongation factor GreA |
| M. thermoresistible (build 8) | TH_2139 | - | 1e-42 | 60.00% (150) | transcription elongation factor GreA |
| M. ulcerans Agy99 | MUL_0200 | greA | 2e-23 | 38.89% (162) | transcription elongation factor GreA |
| M. vanbaalenii PYR-1 | Mvan_4781 | - | 1e-33 | 50.00% (146) | GreA/GreB family elongation factor |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_1984|M.avium_104 MTSTQPAWISPQAHERLQRELATLR--------ELRDTSAVGSATDENSL
MSMEG_6292|M.smegmatis_MC2_155 MNAPQRIWMSPQAHERLQQELSTLR--------ELIATEAA-SDSDENQV
TH_2139|M.thermoresistible__bu -MTTQRIWLTQEGYERLQQELHTLQ--------ELVNTAID---DDENTL
MMAR_4387|M.marinum_M MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
MUL_0200|M.ulcerans_Agy99 MTDTQVTWLTQESHDRLKAELDHLIANRPIIAAEINDRREEGDLRENGGY
Mb1109c|M.bovis_AF2122/97 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
Rv1080c|M.tuberculosis_H37Rv MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MLBr_02393|M.leprae_Br4923 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINDRREEGDLRENGGY
MAB_1201c|M.abscessus_ATCC_199 MTDTQVTWLTQESHDRLKAELDQLIANRPVIAAEINERREEGDLRENGGY
Mflv_1945|M.gilvum_PYR-GCK MQPADTIWMSPQTRESLEQELAALMA-------APGPAGSDE------VV
Mvan_4781|M.vanbaalenii_PYR-1 MYTADYVWMTPQAREDLEKELADLMA-------VPNPAGTDETERTDQVV
.: *:: : : *: ** *
MAV_1984|M.avium_104 AVQR----AWQLRIHRIHDLLVNAVVGDDPPDDGVAEPGMVLTIRYDD-T
MSMEG_6292|M.smegmatis_MC2_155 AVQR----ARQARIQQIHDLLLHAEVGETPPNDGVAEPGMVLTVRWDG-S
TH_2139|M.thermoresistible__bu DVQR----ARLERIHEIHEILGNAVVGEAPPDDGVAEPGMVVTVSYDDDP
MMAR_4387|M.marinum_M HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
MUL_0200|M.ulcerans_Agy99 HAAREEQGQQEARIRQLQDLLNNAKVGEAPKQSGIALPGSVVKVYYNGDQ
Mb1109c|M.bovis_AF2122/97 HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
Rv1080c|M.tuberculosis_H37Rv HAAREEQGQQEARIRQLQDLLSNAKVGEAPKQSGVALPGSVVKVYYNGDK
MLBr_02393|M.leprae_Br4923 HAAREEQGQQEARIRQLQDLLNIAKVGEAPKQSGVALPGSVVKVYYNDDK
MAB_1201c|M.abscessus_ATCC_199 HAAREEQGQQEARIRQLQELLNNAKVGEAPTQSGVALPGSVVKVYYDGDK
Mflv_1945|M.gilvum_PYR-GCK DAWL----ARKERIRQIHELLTKAEHAVDPADDGVAEPGMVLTVRFDD-A
Mvan_4781|M.vanbaalenii_PYR-1 DAWL----ARKERIRQIHELLSRADHSTSPADDGIAEPGMVLTVRFDD-T
. **:.::::* * . * :.*:* ** *:.: ::.
MAV_1984|M.avium_104 GEIETFLLSVR--GAEY-DGTEVYSIRSPLGAAIAGARPGEQRSYILPNG
MSMEG_6292|M.smegmatis_MC2_155 DDTETFLLGVR--GAEY-GDLEVYSVQSPLGSAILGARPGEHREYETPTG
TH_2139|M.thermoresistible__bu DDTETFLLGVR--GAEEADDLEVYSLDSPLGSAIAGARTGETRTYQVPSG
MMAR_4387|M.marinum_M SDSETFLIATRQEGVND-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MUL_0200|M.ulcerans_Agy99 SDSETFLIATRQEGVND-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Mb1109c|M.bovis_AF2122/97 SDSETFLIATRQEGVSD-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
Rv1080c|M.tuberculosis_H37Rv SDSETFLIATRQEGVSD-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MLBr_02393|M.leprae_Br4923 SDTETFLIATRQEGVNE-GKLEVYSPNSPLGGALIDAKVGETRSYTVPNG
MAB_1201c|M.abscessus_ATCC_199 GDTETFLIATRQEGVKD-GKLEVYSPSSPLGGALIDAKVGETRSYTVPNG
Mflv_1945|M.gilvum_PYR-GCK GDTETFLLGTR--ATVD-SELDVYSVNSPMGSALLGATPGQQRSYQLPNG
Mvan_4781|M.vanbaalenii_PYR-1 GDTETFLLGTR--GTAD-PELEVYTVASPLGSALLGAVPGEQRSFRLPNG
.: ****:..* .. :**: **:*.*: .* *: * : *.*
MAV_1984|M.avium_104 APLTVTLLKAVPYGVHLAGSS-------
MSMEG_6292|M.smegmatis_MC2_155 ARIGVTLLEAVPYGLHAQAVKATA----
TH_2139|M.thermoresistible__bu ATVKVTLVSAVPYGSHHPTPAG------
MMAR_4387|M.marinum_M SVIEVTLISAEPYHS-------------
MUL_0200|M.ulcerans_Agy99 SVIEVTLISAEPYHS-------------
Mb1109c|M.bovis_AF2122/97 STVSVTLVSAEPYHS-------------
Rv1080c|M.tuberculosis_H37Rv STVSVTLVSAEPYHS-------------
MLBr_02393|M.leprae_Br4923 NTVQVTLISAEPYHS-------------
MAB_1201c|M.abscessus_ATCC_199 TEVQVTLVSAEPYHE-------------
Mflv_1945|M.gilvum_PYR-GCK GTQQVTLLSAKPFAAHAREAVTAGSPQR
Mvan_4781|M.vanbaalenii_PYR-1 SIQQVTVLAAKPFGAHDPRELAKR----
**:: * *: