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SGQSAAQRPRQAILGQLPRIYRADGSPIRVLLVDDEPALTNLVKMALHYEGWVVDIAHNGREAMAKFDRA APDVLVLDIMLPDVDGLRILERVRQSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSLEELVARLR GLLRRASQQPAPTAETLKVGDLVVDTASREVTRGDTPVSLSSTEFELLRFLMRNPRRALSRTEILDRVWN YDFAGRTSIVDLYISYLRKKIDSGREPMIHTVRGVGYMLRPAE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1176 | - | - | 100% (254) | two component transcriptional regulator trcr |
| M. avium 104 | MAV_0304 | - | 3e-79 | 60.61% (231) | DNA-binding response regulator |
| M. avium 104 | MAV_0701 | phoP | 1e-59 | 49.33% (223) | DNA-binding response regulator PhoP |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1062c | trcR | 1e-123 | 85.43% (254) | two component transcriptional regulator TRCR |
| M. gilvum PYR-GCK | Mflv_2266 | - | 6e-78 | 61.47% (231) | two component transcriptional regulator |
| M. tuberculosis H37Rv | Rv1033c | trcR | 1e-123 | 85.43% (254) | two component transcriptional regulator TRCR |
| M. leprae Br4923 | MLBr_00174 | - | 1e-56 | 46.88% (224) | putative two-component response regulator |
| M. abscessus ATCC 19977 | MAB_2581 | - | 2e-75 | 58.87% (231) | putative two component transcriptional regulatory protein |
| M. marinum M | MMAR_4455 | trcR | 1e-125 | 87.40% (254) | two-component transcriptional regulator TrcR |
| M. smegmatis MC2 155 | MSMEG_2916 | - | 1e-104 | 72.73% (253) | DNA-binding response regulator, PhoP family protein |
| M. thermoresistible (build 8) | TH_1732 | phoP | 3e-58 | 48.66% (224) | DNA-binding response regulator PhoP |
| M. ulcerans Agy99 | MUL_4624 | trcR | 1e-126 | 87.40% (254) | two component transcriptional regulator TrcR |
| M. vanbaalenii PYR-1 | Mvan_2296 | - | 1e-105 | 76.42% (246) | two component transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2266|M.gilvum_PYR-GCK --MAHPQSDPEDPARVVMR------RADGSPIRVLVVDDEAVLAELMSMA
MAB_2581|M.abscessus_ATCC_1997 --MSDAASVSSEKARSSLR------RPDGSPVRVLVVDDERSLAELISMA
MMAR_4455|M.marinum_M ---MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMA
MUL_4624|M.ulcerans_Agy99 MKAMTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMA
Mb1062c|M.bovis_AF2122/97 MTTMSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMA
Rv1033c|M.tuberculosis_H37Rv MTTMSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMA
MAV_1176|M.avium_104 ---MSGQSAAQRPRQAILGQLPRIYRADGSPIRVLLVDDEPALTNLVKMA
MSMEG_2916|M.smegmatis_MC2_155 --MTSAQLKNPRPRRAILGQLPRMYRPDGSPIRVLLVDDERALTNLVQMA
Mvan_2296|M.vanbaalenii_PYR-1 --MTSAPVEDQGPRRAILGRLPRMYRADGSPIRVLLVDDERALTNLVKMA
MLBr_00174|M.leprae_Br4923 -------------------------------MRILAVDDDRAVRESLRRS
TH_1732|M.thermoresistible__bu -----------------------------VAVRILVVDDDRAVRESLRRS
:*:* ***: : : : :
Mflv_2266|M.gilvum_PYR-GCK LRYEGWDISTAGDGATAIALARQNPPDVVVLDVMLPDMSGLEVLRTLREQ
MAB_2581|M.abscessus_ATCC_1997 LRYEGWEIHVAGDGMSAVKLARQVHPDIVVLDVMLPDVSGLEVLRQLRDL
MMAR_4455|M.marinum_M LHYEGWDVEIAHNGREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDS
MUL_4624|M.ulcerans_Agy99 LHYEGWDVEIAHNGREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDS
Mb1062c|M.bovis_AF2122/97 LHYEGWDVEVAHDGQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRES
Rv1033c|M.tuberculosis_H37Rv LHYEGWDVEVAHDGQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRES
MAV_1176|M.avium_104 LHYEGWVVDIAHNGREAMAKFDRAAPDVLVLDIMLPDVDGLRILERVRQS
MSMEG_2916|M.smegmatis_MC2_155 LQYEGWVIDVAHDAAQAVEKYRANLPDLLVLDIMLPDTDGLGVLEQIRSF
Mvan_2296|M.vanbaalenii_PYR-1 LQYEGWEIDVAHDAAEAVDKYRANTPDLLVLDIMLPDMDGLGVLARLRES
MLBr_00174|M.leprae_Br4923 LSFNGYSVELANDGVEALEMVARDRPDALVLDVMMPRLDGLEVCRQLRST
TH_1732|M.thermoresistible__bu LSFNGYSVELAEDGVEALDLIANDRPDAVVLDVMMPRLDGLEVCRQLRST
* ::*: : * :. *: ** :***:*:* .** : :*.
Mflv_2266|M.gilvum_PYR-GCK IPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRT
MAB_2581|M.abscessus_ATCC_1997 YPGLPLLLLTAKDSLEDRIAGLTAGGDDYVTKPFSLEEVVLRLRALLRRT
MMAR_4455|M.marinum_M DAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSLEELVARLRGLLRRS
MUL_4624|M.ulcerans_Agy99 DAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSLEELVARLRGLLRRS
Mb1062c|M.bovis_AF2122/97 DVYTPTLFLTARDSVMDRVTGLTSGADDYMTKPFSLEELVARLRGLLRRS
Rv1033c|M.tuberculosis_H37Rv DVYTPTLFLTARDSVMDRVTGLTSGADDYMTKPFSLEELVARLRGLLRRS
MAV_1176|M.avium_104 DAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSLEELVARLRGLLRRA
MSMEG_2916|M.smegmatis_MC2_155 GTYTPTLFLTARDSVADRVEGLTAGGDDYMTKPFSLEELVARLRGLLRRT
Mvan_2296|M.vanbaalenii_PYR-1 GAYTPTLFLTARDSVADRVTGLTAGGDDYMTKPFSLEELVARLRGLLRRS
MLBr_00174|M.leprae_Br4923 GDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARIRALLRRT
TH_1732|M.thermoresistible__bu GDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRT
* *.***:**: :*: ** :*.***:.***::**:: *:*.****:
Mflv_2266|M.gilvum_PYR-GCK GVATATGGAKLVVGDLVLDEDSHEVTRGGDLITLTATEFELLRFMMRNAR
MAB_2581|M.abscessus_ATCC_1997 GIAGDSGDARLIVGDLVLDEDSHEVTRDGELINLTATEFELLRFMMRNNK
MMAR_4455|M.marinum_M SHLAPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR
MUL_4624|M.ulcerans_Agy99 SHLAPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR
Mb1062c|M.bovis_AF2122/97 SHLERPADEALRVGDLTLDGASREVTRDGTPISLSSTEFELLRFLMRNPR
Rv1033c|M.tuberculosis_H37Rv SHLERPADEALRVGDLTLDGASREVTRDGTPISLSSTEFELLRFLMRNPR
MAV_1176|M.avium_104 SQQPAPTAETLKVGDLVVDTASREVTRGDTPVSLSSTEFELLRFLMRNPR
MSMEG_2916|M.smegmatis_MC2_155 AYLTPAADETLRVGDLTLDASSHTVTRGDTPIALTSTEFQLLRVLMRHPR
Mvan_2296|M.vanbaalenii_PYR-1 AYLAPADDESLSVGDLTLDAASREVTRAGEPVSLTSTEFELLRLLMRNQR
MLBr_00174|M.leprae_Br4923 KPDDAAESVAMSFSDLTLDPVTREVARGQRWISLTRTEFALLEMLIANPR
TH_1732|M.thermoresistible__bu TPDDAADSQKLTFADLTLDPVTREVTRGNRQISLTRTEFALLELLIANPR
. : ..** :* :: *:* : *: *** **..:: : :
Mflv_2266|M.gilvum_PYR-GCK CVLSKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREP-MIHTLRGA
MAB_2581|M.abscessus_ATCC_1997 RVLSKHQILDRVWSYDFGGRSNVVELYISYLRKKIDTGREP-MIHTLRGA
MMAR_4455|M.marinum_M RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREP-MIHTVRGI
MUL_4624|M.ulcerans_Agy99 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREP-MIHTVRGI
Mb1062c|M.bovis_AF2122/97 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREP-MIHTVRGI
Rv1033c|M.tuberculosis_H37Rv RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREP-MIHTVRGI
MAV_1176|M.avium_104 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSGREP-MIHTVRGV
MSMEG_2916|M.smegmatis_MC2_155 KALSRDDILRQVWEYDFGGRTSIVDLYVSYLRKKIDTGREP-MIHTVRGV
Mvan_2296|M.vanbaalenii_PYR-1 KALSRTDILRKVWDYDFGGRTSIVDLYVSYLRKKIDAGRDP-MIHTVRGV
MLBr_00174|M.leprae_Br4923 RVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGV
TH_1732|M.thermoresistible__bu RVLSRSRILEEVWGFDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGV
.*:: ** .** :** . :::*:.***:* :: :. :***:**
Mflv_2266|M.gilvum_PYR-GCK GYVLKPAR-
MAB_2581|M.abscessus_ATCC_1997 GYVLKPAH-
MMAR_4455|M.marinum_M GYMLRPAE-
MUL_4624|M.ulcerans_Agy99 GYMLRPAE-
Mb1062c|M.bovis_AF2122/97 GYMLRPPE-
Rv1033c|M.tuberculosis_H37Rv GYMLRPPE-
MAV_1176|M.avium_104 GYMLRPAE-
MSMEG_2916|M.smegmatis_MC2_155 GYMLRPAD-
Mvan_2296|M.vanbaalenii_PYR-1 GYMLRPAR-
MLBr_00174|M.leprae_Br4923 GYVLRETPP
TH_1732|M.thermoresistible__bu GYVLRETPP
**:*: .