For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VMLLAMSMVAMVVVLMAFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGTAYSDVNAMLV NPGHAIYTAQQPGQTLPVGSPEKAVIHGELFMSRRTAGDQRILAVHLQNGTSLLISKSLKPTEAVMNKLR WVLLIVGGVGVAVAAVAGGMVTRAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRAL AESRERQARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLV DLTRDDAGQVVHEPVDMSDVIDRSLERVRRRRNDIHFDVDVTPWQMYGDAAGLSRAVLNLLDNAAKWSPP GGHVGVTMRQLDPSHAELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVKKVVLNHGGMLR VEDTVPGGQPPGTSFYVLLPGRPLPPAGHSTPAGESETDKAEAATDPAVPVAGDTANSRESANVISVDSQ SARAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1095 | - | - | 100% (495) | sensor histidine kinase |
M. avium 104 | MAV_3405 | - | 1e-36 | 31.89% (439) | hypothetical protein MAV_3405 |
M. avium 104 | MAV_3282 | - | 1e-34 | 33.85% (322) | hypothetical protein MAV_3282 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1008 | mprB | 0.0 | 84.44% (495) | two component sensor kinase MprB |
M. gilvum PYR-GCK | Mflv_1888 | - | 0.0 | 75.85% (443) | integral membrane sensor signal transduction histidine kinase |
M. tuberculosis H37Rv | Rv0982 | mprB | 0.0 | 84.24% (495) | two component sensor kinase MprB |
M. leprae Br4923 | MLBr_00175 | - | 0.0 | 84.57% (499) | putative two-component system sensor kinase |
M. abscessus ATCC 19977 | MAB_1077 | - | 1e-180 | 67.40% (503) | two component sensor kinase MprB |
M. marinum M | MMAR_4528 | mprB | 0.0 | 85.45% (495) | two-component sensor kinase MprB |
M. smegmatis MC2 155 | MSMEG_5487 | - | 0.0 | 78.81% (453) | sensor histidine kinase |
M. thermoresistible (build 8) | TH_2428 | - | 0.0 | 78.65% (473) | PUTATIVE integral membrane sensor signal transduction histidine |
M. ulcerans Agy99 | MUL_4700 | mprB | 0.0 | 85.45% (495) | two component sensor kinase MprB |
M. vanbaalenii PYR-1 | Mvan_4843 | - | 0.0 | 75.22% (460) | integral membrane sensor signal transduction histidine kinase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1888|M.gilvum_PYR-GCK MAGDP-------NTATWPPQPPGPPPP--PASS-ISLRWRVMLLAMSMAV Mvan_4843|M.vanbaalenii_PYR-1 MAAD--------NAGRWPGQPPGPPAPTHPASS-VSLRWRVMLLAMSMVV MSMEG_5487|M.smegmatis_MC2_155 MASATCCGKRLRSEMAFPPNS-WRPTGPLPTSS-LSLRWRVMMLAMSMVA TH_2428|M.thermoresistible__bu ----------MTFAQPYPPSPPQRQATSQPASS-LSLRWRVMLLAMSMVA Mb1008|M.bovis_AF2122/97 ----------------MWWFRRRDRAPLRATSS-LSLRWRVMLLAMSMVA Rv0982|M.tuberculosis_H37Rv ----------------MWWFRRRDRAPLRATSS-LSLRWRVMLLAMSMVA MMAR_4528|M.marinum_M ----------------MVGFRRGPRAPLRATSS-LSLRWRVMLLAMSMVA MUL_4700|M.ulcerans_Agy99 ----------------MVGFRRGPRAPLRATSS-LSLRWRVMLLAMSMVA MAV_1095|M.avium_104 ----------------------------------------MMLLAMSMVA MLBr_00175|M.leprae_Br4923 ----------------MVRFAWRRRASLRATSS-LSLRWRVMLLAMSMVA MAB_1077|M.abscessus_ATCC_1997 -------MSTLRMPRRMRDSSTAIFTPLRATSSSVSLRWRVMLLAMSMVA :*:*****.. Mflv_1888|M.gilvum_PYR-GCK IPVVLMGVAGYAVVSRALYDDIDDQLRTRAQMLIESGSLDADPGKAIEGT Mvan_4843|M.vanbaalenii_PYR-1 ISVVLMAVAVFAVTSRALYDDIDNQLRSRAQMLIESRSLDIDPGKAIEGT MSMEG_5487|M.smegmatis_MC2_155 LVVVLMAVAVYAVVSRALYDDLDNQLHSRARLLIESGSLAADPGKAIEGT TH_2428|M.thermoresistible__bu MVVVLMSIALYAVVSRALYNDIDNQLHSRARLLIESGSLAADPGRAIEGT Mb1008|M.bovis_AF2122/97 MVVVLMSFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT Rv0982|M.tuberculosis_H37Rv MVVVLMSFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT MMAR_4528|M.marinum_M MVVVLMSFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT MUL_4700|M.ulcerans_Agy99 MVVVLMSFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT MAV_1095|M.avium_104 MVVVLMAFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT MLBr_00175|M.leprae_Br4923 MVVVLMAFAVYVVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGT MAB_1077|M.abscessus_ATCC_1997 MVVVLMAVASYLLVSTALYRDVDKQLNDRANLLIGSGLLSVDPRRAIEGT : ****..* : : * *** *:*.**. **.:** * * ** :***** Mflv_1888|M.gilvum_PYR-GCK AYS-DMNAMFYIPGRSKYTAKQQGQTLPVGRPEQDVMDGTLWMSLRTVEH Mvan_4843|M.vanbaalenii_PYR-1 AYS-DMNAMFYIPGRSKYTANQQGQTLPVGQPEQDVMDGTLLLSLRTVEH MSMEG_5487|M.smegmatis_MC2_155 AYS-DVNAMLVIPGRSIYTANQQGQTLPLGEPEKDVISGELLMSLRTANH TH_2428|M.thermoresistible__bu AYS-DVNAMLVNPGRSIYTANQQGEALPLGEPERQVLSGELVMSLRTADQ Mb1008|M.bovis_AF2122/97 AYS-DVNAMLVNPGQSIYTAQQPGQTLPVGAAEKAVIRGELFMSRRTTAD Rv0982|M.tuberculosis_H37Rv AYS-DVNAMLVNPGQSIYTAQQPGQTLPVGAAEKAVIRGELFMSRRTTAD MMAR_4528|M.marinum_M AYS-DVNAMLVNPGRSIYTANQPGQTLPVGAPEKAVIHGDLFLSRRTVSD MUL_4700|M.ulcerans_Agy99 AYS-DVNAMLVNPGRSIYTANQPGQTLPVGAPEKAVIHGDLFLSRRTVSD MAV_1095|M.avium_104 AYS-DVNAMLVNPGHAIYTAQQPGQTLPVGSPEKAVIHGELFMSRRTAGD MLBr_00175|M.leprae_Br4923 AYS-DVNAMLVNPGHSIYTANQPGQTLPVGTAEKAVIRGELFMSQRTASD MAB_1077|M.abscessus_ATCC_1997 AYSADVNAKLIFPGLITFSATQQGQTIPYGTPEQAVTRGDLQQSLRTVNH *** *:** : ** ::* * *:::* * .*: * * * * **. . Mflv_1888|M.gilvum_PYR-GCK QRVLAVHLASGNSLLLSKSLAPTGQVLKRLGTVLLIVGGIGVVVAAIAGG Mvan_4843|M.vanbaalenii_PYR-1 QRVLAIRLASGNTLLLSKSLAPTGKVLKRLGTVLLIVGGLGVAVAAIAGG MSMEG_5487|M.smegmatis_MC2_155 QRVLAVHLANGSSLLISKSLAPTVQVLRRLGTVLLIVGGIGVAVAAIAGG TH_2428|M.thermoresistible__bu QRVLAIHLSNGSSLLISKSLAPTMEVLRRLGTVLLIVGGIGVAVAAIAGG Mb1008|M.bovis_AF2122/97 QRVLAIRLTNGSSLLISKSLKPTEAVMNKLRWVLLIVGGIGVAVAAVAGG Rv0982|M.tuberculosis_H37Rv QRVLAIRLTNGSSLLISKSLKPTEAVMNKLRWVLLIVGGIGVAVAAVAGG MMAR_4528|M.marinum_M QRVLAIHLPNGSSLLISKSLKPTEAVMTKLRAVLLIVGGVGVAVAAVAGG MUL_4700|M.ulcerans_Agy99 QRVLAIHLPNGSSLLISKSLKPTEAVMTKLRAVLLIVGGVGVAVAAVAGG MAV_1095|M.avium_104 QRILAVHLQNGTSLLISKSLKPTEAVMNKLRWVLLIVGGVGVAVAAVAGG MLBr_00175|M.leprae_Br4923 QRILAIHLPNDSSLLISKSLRPTEAVMTKLRWVLLIVGSLGVAVAAVAGG MAB_1077|M.abscessus_ATCC_1997 QRVLALRLDNGSTLIMAKSLDPTDTVLRRLGWVLLIVGGVGVAVAAAAGA **:**::* ...:*:::*** ** *: :* ******.:**.*** **. Mflv_1888|M.gilvum_PYR-GCK MVARAGLRPVARLTQAAERVARTDDLHPIPVVGNDELARLTETFNMMLRA Mvan_4843|M.vanbaalenii_PYR-1 MVASAGLRPVGRLTQAAERVARTDDLRPIPVIGNDELARLTETFNMMLRA MSMEG_5487|M.smegmatis_MC2_155 AVARAGLRPVGRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRA TH_2428|M.thermoresistible__bu MVARAGLRPVSRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRA Mb1008|M.bovis_AF2122/97 MVTRAGLRPVGRLTEAAERVARTDDLRPIPVFGSDELARLTEAFNLMLRA Rv0982|M.tuberculosis_H37Rv MVTRAGLRPVGRLTEAAERVARTDDLRPIPVFGSDELARLTEAFNLMLRA MMAR_4528|M.marinum_M MVTRAGLRPVGRLTEAAERVARTDDLRPIPVFGSDELARLTEAFNLMLRA MUL_4700|M.ulcerans_Agy99 MVTRAGLRPVGRLTEAAERVARTDDLRPIPVFGSDELARLTEAFNLMLRA MAV_1095|M.avium_104 MVTRAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRA MLBr_00175|M.leprae_Br4923 MVTRAGLRPVGRLTEAAERVARTDDLRPIPVFGSDELARLTEAFNLMLRA MAB_1077|M.abscessus_ATCC_1997 MVAGTGLRPVARLTDAAERVARTDDLRPIAVTGSDELARLTISFNTMLRA *: :*****.***:***********:**.* *.******* :** **** Mflv_1888|M.gilvum_PYR-GCK LTESRDRQSRLVADAGHELRTPLTSLRTNVELLMSSMKPGAPRIPEEDMD Mvan_4843|M.vanbaalenii_PYR-1 LAESRERQARLVTDAGHELRTPLTSLRTNVELLMESMKPGAPRIPEEDMA MSMEG_5487|M.smegmatis_MC2_155 LAESRERQARLVSDAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMA TH_2428|M.thermoresistible__bu LAESRERQARLVADAGHELRTPLTSLRTNVELLMASQQPGAPGLPEEEMA Mb1008|M.bovis_AF2122/97 LAESRERQARLVTDAGHELRTPLTSLRTNVELLMASMAPGAPRLPKQEMV Rv0982|M.tuberculosis_H37Rv LAESRERQARLVTDAGHELRTPLTSLRTNVELLMASMAPGAPRLPKQEMV MMAR_4528|M.marinum_M LAESRERQARLVSDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMV MUL_4700|M.ulcerans_Agy99 LAESRERQARLVSDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMV MAV_1095|M.avium_104 LAESRERQARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMV MLBr_00175|M.leprae_Br4923 LAESRERQARLVTDAGHELRTPLTSLRTNVELLIASMAPEAPRLPDQEMA MAB_1077|M.abscessus_ATCC_1997 LAESRDRQARLVTDAGHELRTPLTSLRTNTELLMAAMQPGAPRLPDEEMQ *:***:**:***:****************.***: : * ** :*.::* Mflv_1888|M.gilvum_PYR-GCK DLRSDVIGQIEELSTLVGDLVDLTRDEAGNAVHDTVEMSEVIERSLERVR Mvan_4843|M.vanbaalenii_PYR-1 ELRTDVIAQIEEMSTLVGDLVDLTRDDAGNAVHETVEITEVIDRSLERVR MSMEG_5487|M.smegmatis_MC2_155 GLRADVIAQIEELSTLVGDLVDLTREDAGGITPEPVDMADVIDRSLERVR TH_2428|M.thermoresistible__bu GLRADVIAQIEELSTLVGDLVDLTRDDAGGVIHEPVDIADVVDRSLERVR Mb1008|M.bovis_AF2122/97 DLRADVLAQIEELSTLVGDLVDLSRGDAGEVVHEPVDMADVVDRSLERVR Rv0982|M.tuberculosis_H37Rv DLRADVLAQIEELSTLVGDLVDLSRGDAGEVVHEPVDMADVVDRSLERVR MMAR_4528|M.marinum_M GLREDVVAQIEELSTLVGDLVDLTRGDAGVVVHEPVDMAEVVDRSLERVR MUL_4700|M.ulcerans_Agy99 GLREDVVAQIEELSTLVGDLVDLTRGDAGVVVHEPVDMAEVVDRSLERVR MAV_1095|M.avium_104 ELRADVLAQIEELSTLVGDLVDLTRDDAGQVVHEPVDMSDVIDRSLERVR MLBr_00175|M.leprae_Br4923 DLRADVLAQIEELSTLVGDLVDLTRDDAGQVVHEPIDMSEVLYRSLERVR MAB_1077|M.abscessus_ATCC_1997 ALQQDVIAQIEELSTLVGDLVDLARGDGADIVHEPVDMVEVVEGTLERVR *: **:.****:**********:* :.. :.::: :*: :***** Mflv_1888|M.gilvum_PYR-GCK RRRNDIEFHVEITPWQVYGDAAGLGRAVLNLLDNAAKWSPPGGGVWVRLR Mvan_4843|M.vanbaalenii_PYR-1 RRRNDIQFDVAVTPWQVYGDAAGLGRAVLNLLDNAAKWSPPGGRVGVGLT MSMEG_5487|M.smegmatis_MC2_155 RRRNDIEFDVDVIGWQVFGDAQGLGRAVLNLLDNAAKWSPPGGRVGVRLH TH_2428|M.thermoresistible__bu RRRNDIDFDIEVVPWQVYGDAAGLSRAVMNLLDNAAKWSPSGGRVGVRLT Mb1008|M.bovis_AF2122/97 RRRNDIHFDVEVIGWQVYGDTAGLSRMALNLMDNAAKWSPPGGHVGVRLS Rv0982|M.tuberculosis_H37Rv RRRNDILFDVEVIGWQVYGDTAGLSRMALNLMDNAAKWSPPGGHVGVRLS MMAR_4528|M.marinum_M RRRNDIHFDVDVVGWQVYGDAAGLSRAALNLMDNAAKWSPPGGRVGIRLR MUL_4700|M.ulcerans_Agy99 RRRNDIHFDVDVVGWQVYGDAAGLSRAALNLMDNAAKWSPPGGRVGIRLR MAV_1095|M.avium_104 RRRNDIHFDVDVTPWQMYGDAAGLSRAVLNLLDNAAKWSPPGGHVGVTMR MLBr_00175|M.leprae_Br4923 RRRNDIHFDVQAIGWQIYGDAAGLSRAVLNLMDNAAKWSPSGGRVVVTMR MAB_1077|M.abscessus_ATCC_1997 RRRNDIEFDVVMQPWQVYGDAAGLSRAVLNLLDNAAKWSPSGTAVSVRLA ****** *.: **::**: **.* .:**:********.* * : : Mflv_1888|M.gilvum_PYR-GCK QLDQLTAEVVVSDLGPGIPPAERELVFERFFRSTTARAMPGSGLGLAIVK Mvan_4843|M.vanbaalenii_PYR-1 QIDALHAELVVSDRGPGIPPQERALVFERFFRSTSARSMPGSGLGLAIVK MSMEG_5487|M.smegmatis_MC2_155 QVDHMHAEIVVSDQGPGIPPEERRLVFERFYRSDAARAMPGSGLGLAIVQ TH_2428|M.thermoresistible__bu QVDPVHAELVVSDHGPGIPPQERRLVFERFYRSTTARSMPGSGLGLAIVK Mb1008|M.bovis_AF2122/97 QLDASHAELVVSDRGPGIPVQERRLVFERFYRSASARALPGSGLGLAIVK Rv0982|M.tuberculosis_H37Rv QLDASHAELVVSDRGPGIPVQERRLVFERFYRSASARALPGSGLGLAIVK MMAR_4528|M.marinum_M QLDPSHAELVVSDNGPGISPQERRLVFERFYRSTSARAMPGSGLGLAIVK MUL_4700|M.ulcerans_Agy99 QLDPSHAELVVSDNGPGISPQERRLVFERFYRSTSARAMPGSGLGLAIVK MAV_1095|M.avium_104 QLDPSHAELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVK MLBr_00175|M.leprae_Br4923 QFDPSHVELVVSDYGPGIPPQERRLVFERFYRSTTARSLPGSGLGLAIVK MAB_1077|M.abscessus_ATCC_1997 QVDAAHAELVISDHGPGIPPAERDLVFERFYRATPARGMPGSGLGLAIVK *.* .*:*:** ****. ** ******:*: .**.:**********: Mflv_1888|M.gilvum_PYR-GCK QVVLKHGGSLRVEDTVP-----GGEPPGTSVHVVLPGRPSA--------- Mvan_4843|M.vanbaalenii_PYR-1 QVVLKHGGTLRIEDTVP-----GGTPPGTAMHVVLPGRPSP--------- MSMEG_5487|M.smegmatis_MC2_155 QVVLKHGGALRIDETVP-----GGNPPGASVHMLLPGQRIP--------- TH_2428|M.thermoresistible__bu QVVLKHGGTLRVEDTVP-----GGQPPGTSIHVVLPGRPLSGVPPASQEP Mb1008|M.bovis_AF2122/97 QVVLNHGGLLRIEDTDP-----GGQPPGTSIYVLLPGRRMPIPQLPGAT- Rv0982|M.tuberculosis_H37Rv QVVLNHGGLLRIEDTDP-----GGQPPGTSIYVLLPGRRMPIPQLPGAT- MMAR_4528|M.marinum_M QVVLNHGGSLRIEDTVP-----GGQPPGTAICMLLPGRPMPDSAYPAAP- MUL_4700|M.ulcerans_Agy99 QVVLNHGGSLRIEDTVP-----GGQPPGTAICMLLPGRPMPDSAYPAAP- MAV_1095|M.avium_104 KVVLNHGGMLRVEDTVP-----GGQPPGTSFYVLLPGRPLPPAGHSTPAG MLBr_00175|M.leprae_Br4923 QVVINHGGLLRVEDTAP-----GVQPPGTSIYVLLPGRPMPVSAYSTLAD MAB_1077|M.abscessus_ATCC_1997 QVVLKHGGAIKVEETDPGAVIDGEPAPGTSMHVLLPGRPGPIVRP----- :**::*** :::::* * * .**::. ::***: . Mflv_1888|M.gilvum_PYR-GCK -------NLARGGE-------------------------------- Mvan_4843|M.vanbaalenii_PYR-1 -------AGSDEAER------------------------------- MSMEG_5487|M.smegmatis_MC2_155 -----DPGATRSAEGFV------DDRGGHTVATE------------ TH_2428|M.thermoresistible__bu QPPQHAPGADPHAPTQT------GNDAVQSVFTAENK--------- Mb1008|M.bovis_AF2122/97 -------AGARSTDIE-------NSRGSANVISVESQSTRAT---- Rv0982|M.tuberculosis_H37Rv -------AGARSTDIE-------NSRGSANVISVESQSTRAT---- MMAR_4528|M.marinum_M -------DDKKTEPVDTRGANGANSRGSANVISVDSQSARAR---- MUL_4700|M.ulcerans_Agy99 -------DDKKTEPVDTRGANGANSRGSANVISVDSQSARAR---- MAV_1095|M.avium_104 ESE-TDKAEAATDPAVPVAGDTANSRESANVISVDSQSARAR---- MLBr_00175|M.leprae_Br4923 QDMGEANFQDKIGPAVQVSGKSANFRDSAHVISVDYQSARAR---- MAB_1077|M.abscessus_ATCC_1997 -------NMGDTAGRR-------NSGPNAREISVDSQSVPAAWRPS