For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TIKGSVVQSFAPVSLQAASALFHSLSDETRLAILRRLACGEARVVDLTGELGLAQSTVSAHLGCLRECGL VDYRPQGRSSVYRLARPEVLAVFTAAEDLLAATGNAVALCPNYGHPDGHPETKRKVVR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4854c | - | - | 100% (129) | ArsR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_4426 | - | 5e-08 | 45.71% (70) | ArsR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3862 | - | 9e-08 | 40.00% (75) | ArsR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0591 | - | 3e-08 | 43.08% (65) | ArsR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_3178 | - | 4e-37 | 76.00% (100) | regulatory protein, ArsR |
| M. tuberculosis H37Rv | Rv0576 | - | 3e-08 | 43.08% (65) | ArsR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2139 | - | 2e-34 | 64.35% (115) | transcriptional regulatory protein |
| M. avium 104 | MAV_5108 | - | 3e-06 | 31.65% (79) | transcriptional regulator, ArsR family protein |
| M. smegmatis MC2 155 | MSMEG_5603 | - | 8e-10 | 39.58% (96) | transcriptional regulator, ArsR family protein |
| M. thermoresistible (build 8) | TH_1240 | - | 3e-09 | 38.75% (80) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN |
| M. ulcerans Agy99 | MUL_3611 | - | 6e-06 | 35.96% (89) | ArsR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_3243 | - | 1e-36 | 71.43% (105) | regulatory protein, ArsR |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3178|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3243|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2139|M.marinum_M --------------------------------------------------
MAB_4854c|M.abscessus_ATCC_199 --------------------------------------------------
MSMEG_5603|M.smegmatis_MC2_155 --------------------------------------------------
TH_1240|M.thermoresistible__bu --------------------------------------------------
Mb0591|M.bovis_AF2122/97 MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGL
Rv0576|M.tuberculosis_H37Rv MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGL
MAV_5108|M.avium_104 --------------------------------------------------
MUL_3611|M.ulcerans_Agy99 --------------------------------------------------
Mflv_3178|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3243|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2139|M.marinum_M --------------------------------------------------
MAB_4854c|M.abscessus_ATCC_199 --------------------------------------------------
MSMEG_5603|M.smegmatis_MC2_155 --------------------------------------------------
TH_1240|M.thermoresistible__bu --------------------------------------------------
Mb0591|M.bovis_AF2122/97 VTARKQGRERYYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGD
Rv0576|M.tuberculosis_H37Rv VTARKQGRERYYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGD
MAV_5108|M.avium_104 --------------------------------------------------
MUL_3611|M.ulcerans_Agy99 --------------------------------------------------
Mflv_3178|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_3243|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2139|M.marinum_M --------------------------------------------------
MAB_4854c|M.abscessus_ATCC_199 --------------------------------------------------
MSMEG_5603|M.smegmatis_MC2_155 --------------------------------------------------
TH_1240|M.thermoresistible__bu --------------------------------------------------
Mb0591|M.bovis_AF2122/97 CAMPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTV
Rv0576|M.tuberculosis_H37Rv CAMPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTV
MAV_5108|M.avium_104 --------------------------------------------------
MUL_3611|M.ulcerans_Agy99 --------------------------------------------------
Mflv_3178|M.gilvum_PYR-GCK -------------------------------------MNKRDTCLAGNTS
Mvan_3243|M.vanbaalenii_PYR-1 -----------------------------------MTMNKADGCLTGTTS
MMAR_2139|M.marinum_M -----------------------------------MPMKIADDAPP-TAS
MAB_4854c|M.abscessus_ATCC_199 -------------------------------------MTIKGSVVQSFAP
MSMEG_5603|M.smegmatis_MC2_155 ------------------------------------------------MQ
TH_1240|M.thermoresistible__bu ----------------------------------------------VGMQ
Mb0591|M.bovis_AF2122/97 TPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTE
Rv0576|M.tuberculosis_H37Rv TPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTE
MAV_5108|M.avium_104 ----------------------------------------------MADS
MUL_3611|M.ulcerans_Agy99 --------------MATSPSPSTAAHDDFVSRHEHDVGDFAEHPAFPAPP
Mflv_3178|M.gilvum_PYR-GCK ---DLDAAVALFHSLSDATRLTIVRRLADGEAR----------VVDLIGE
Mvan_3243|M.vanbaalenii_PYR-1 ESSNLDAAVALFHSLSDSARLAIVRRLADGEAR----------VVDLIGE
MMAR_2139|M.marinum_M PREDLAGAVALFHSLSDPTRLAIARRLADGERR----------VVDLTRE
MAB_4854c|M.abscessus_ATCC_199 --VSLQAASALFHSLSDETRLAILRRLACGEAR----------VVDLTGE
MSMEG_5603|M.smegmatis_MC2_155 TALHTDALARFGHALSDVTRTRILLSLNESPNY----------PADLAEQ
TH_1240|M.thermoresistible__bu TVTHTDALARFGHALSDATRARILLSLTKAPGY----------PAELADR
Mb0591|M.bovis_AF2122/97 VRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQHGDAGPDEWAAAPDPLDE
Rv0576|M.tuberculosis_H37Rv VRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDPLDE
MAV_5108|M.avium_104 RQPLYRMKAEFFKTLGHPARIRVLELLSSREYA----------VSEMLPE
MUL_3611|M.ulcerans_Agy99 PREILEGAGELLRALAAPVRIAIVLQLREAQRC----------VHELVDA
: . * :
Mflv_3178|M.gilvum_PYR-GCK LGLAQSTVSAHVACLRDCG--------------------------LVTGR
Mvan_3243|M.vanbaalenii_PYR-1 LGLAQSTVSAHVACLRDCG--------------------------LVTGR
MMAR_2139|M.marinum_M LGLPQSTVSSHLACLRDCG--------------------------LIAGR
MAB_4854c|M.abscessus_ATCC_199 LGLAQSTVSAHLGCLRECG--------------------------LVDYR
MSMEG_5603|M.smegmatis_MC2_155 LGVSRQTLSNHLACLRGCG--------------------------LVVAV
TH_1240|M.thermoresistible__bu LGVSRQVLSNHLACLRGCG--------------------------LVVAV
Mb0591|M.bovis_AF2122/97 LSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
Rv0576|M.tuberculosis_H37Rv LSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGA
MAV_5108|M.avium_104 VGVEPANLSQQLSILRRAG--------------------------LVTAR
MUL_3611|M.ulcerans_Agy99 LGVPQPLVSQHLKILKAAG--------------------------VVTGE
:. :: *: * :
Mflv_3178|M.gilvum_PYR-GCK PEGRQVFYSLSRPELLDVLAAAETLLAATGNAVALCPTYGTGARGAAID-
Mvan_3243|M.vanbaalenii_PYR-1 PEGRQVFYSLTRPELLDLLVSAETLLAATGNAVALCPTYGTRSGTVATPG
MMAR_2139|M.marinum_M PEGRQVFYALAVPDLLDLFAAAETVLAATGNAVTLCPNYGTRPTRASASR
MAB_4854c|M.abscessus_ATCC_199 PQGRSSVYRLARPEVLAVFTAAEDLLAATGNAVALCPNYG-HPDGHPETK
MSMEG_5603|M.smegmatis_MC2_155 PEGRRTRYELADARIGRALDDLMGLVLDVDPECRCVGPDGAVCGCG----
TH_1240|M.thermoresistible__bu PEGRRTRYELADARIGQALTDLMGLVLAVDPDC-CVGADGGRCSCV----
Mb0591|M.bovis_AF2122/97 AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATV
Rv0576|M.tuberculosis_H37Rv AAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATV
MAV_5108|M.avium_104 REGLSVRYALTSPQVAELLVVARTILTGVVAGQAETLEEIPESLLAEPTG
MUL_3611|M.ulcerans_Agy99 RSGREVLYRLVDQHLAHIVVDAVAHAGEDSA-------------------
* : .
Mflv_3178|M.gilvum_PYR-GCK TEETRQ--------------------------------------------
Mvan_3243|M.vanbaalenii_PYR-1 TQEAHR--------------------------------------------
MMAR_2139|M.marinum_M RRGVKRAAPGVADWSPGR--------------------------------
MAB_4854c|M.abscessus_ATCC_199 RKVVR---------------------------------------------
MSMEG_5603|M.smegmatis_MC2_155 --------------------------------------------------
TH_1240|M.thermoresistible__bu --------------------------------------------------
Mb0591|M.bovis_AF2122/97 PVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSA
Rv0576|M.tuberculosis_H37Rv PVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSA
MAV_5108|M.avium_104 --------------------------------------------------
MUL_3611|M.ulcerans_Agy99 --------------------------------------------------
Mflv_3178|M.gilvum_PYR-GCK ----------------------------------
Mvan_3243|M.vanbaalenii_PYR-1 ----------------------------------
MMAR_2139|M.marinum_M ----------------------------------
MAB_4854c|M.abscessus_ATCC_199 ----------------------------------
MSMEG_5603|M.smegmatis_MC2_155 ----------------------------------
TH_1240|M.thermoresistible__bu ----------------------------------
Mb0591|M.bovis_AF2122/97 GFAAPAAVGSFAPVLDRLIAFTGRQPTAGHVSAT
Rv0576|M.tuberculosis_H37Rv GFAAPAAVGSFAPVLDRLIAFTGRQPTAGHVSAT
MAV_5108|M.avium_104 ----------------------------------
MUL_3611|M.ulcerans_Agy99 ----------------------------------