For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3901 | - | - | 100% (215) | putative protein of unknown function DUF305 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0485 | - | 1e-37 | 42.25% (213) | hypothetical protein Mflv_0485 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4543c | - | 2e-38 | 42.18% (211) | hypothetical protein MAB_4543c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5017 | - | 7e-35 | 39.90% (203) | lipoprotein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0174 | - | 1e-46 | 47.17% (212) | hypothetical protein Mvan_0174 |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_4543c|M.abscessus_ATCC_199 MRNRTRTAILAGAAAAVLILSACSSDNKGDDAKSEHSGHSGMSGMTTTLD
MSMEG_5017|M.smegmatis_MC2_155 MKK-----VLAGG-ISVFALSFVVAG-CGSDTTAEQAQTTSAAAAPSTTQ
TH_3901|M.thermoresistible__bu MTT---TTARIVALLAALATAAFLAGCSSTDTGSTPETSTPETGTDTTQG
Mflv_0485|M.gilvum_PYR-GCK MTS------LLLRLFAVLAVLALATGCGGGGDEASGDGSTGPQIPESPVI
Mvan_0174|M.vanbaalenii_PYR-1 MTT------LMARVIAVVAALVLLAACGGQSDGAD-DSQSGSNEPEAPLI
* . :.. : . . : : :.
MAB_4543c|M.abscessus_ATCC_199 TNAAAPVSDHNDADVTFAQQMIMHHQQAVEMSKLTEGR-TANPAVLDLAK
MSMEG_5017|M.smegmatis_MC2_155 QGRP-----HNDADVMFAQHMIPHHQQAVEMSDIILGKPDIDPRVTDLAD
TH_3901|M.thermoresistible__bu QAAA-----HNDADIAFVTDMIPHHQQALELSALVPDR-SENTQLIELAA
Mflv_0485|M.gilvum_PYR-GCK TGNPAG---YNAADITFASTMVKHHQQGIELAKLVSAR-SGNQQLTALAD
Mvan_0174|M.vanbaalenii_PYR-1 TGDPAG---YNAADIAFAYDMVPHHAQAIDLSRTALER-STNPELTALAQ
. :* **: *. *: ** *.:::: : : : **
MAB_4543c|M.abscessus_ATCC_199 NIETAQQPEIDTFTGWLKQWNQ------------PLMP--EGHDPA--GH
MSMEG_5017|M.smegmatis_MC2_155 QIQAAQGPEIDQMQSWLKQWGN------------PPMGDHEGMGDH--GG
TH_3901|M.thermoresistible__bu GIAAAQDPEIQAMRALLVQWNADDPDGEHGDHAVPGMP--PGMGPH--HD
Mflv_0485|M.gilvum_PYR-GCK QIVAIQQPEINILNVFLVQWDEN-----------PDIRTGPGGDEPRDQS
Mvan_0174|M.vanbaalenii_PYR-1 QIVATQQPEINILNVFLVQWNEN-----------PENRSGPDDGGP-ERA
* : * ***: : * **. * . .
MAB_4543c|M.abscessus_ATCC_199 MPGMVDAPVLDRMKTLNGEVFDQLWLQSMIAHHQGAIAMSNAELSGGQYP
MSMEG_5017|M.smegmatis_MC2_155 MAGMVSDADMTALRDAQGVDAAKLFLTHMIAHHEGAIDMAQEEVNEGRFE
TH_3901|M.thermoresistible__bu MPGMVDPATMARLESLRGTEFDRLWLESMIAHHEGAVEMAQTELAEGENV
Mflv_0485|M.gilvum_PYR-GCK VPGTVDDATVARLESLQGPQFDTLWLETMLGHHQGGVDIATREIDNGANV
Mvan_0174|M.vanbaalenii_PYR-1 LPGTVDEATITKLESLSGPEFDKLWLQSMIGQHQGAVELANTEIADGANV
:.* *. . : :. * *:* *:.:*:*.: :: *: *
MAB_4543c|M.abscessus_ATCC_199 AAKQLAQQIIDNQQPEIDTMQGLLKG--
MSMEG_5017|M.smegmatis_MC2_155 DAVQMARTIVITQEQEIKDMRQVLDSL-
TH_3901|M.thermoresistible__bu DARTLAQQIIDAQQAEIDQMRQMQEAS-
Mflv_0485|M.gilvum_PYR-GCK DAVSVAKSIVAGLNPQMSVMRQMLEGMP
Mvan_0174|M.vanbaalenii_PYR-1 DAIAIARNIVAAQEAQIAQMTQMLEGLP
* :*: *: : :: * : ..