For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSQTPKPPEDESYFSEMIEESEKPAPWYRTGPAIVGTIAAIIAIVAVLMTIVLSTDKRVVRDNTPLTSTP SVSSTAPTVQLTSPSESSTAVPTATEAPSEPAAPVQTSEPTYYETPTSTIYRYPIPAIPSPPPIPPIPAI PQIPQIPQIPQIPGL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_4278 | - | - | 100% (155) | hypothetical protein MAB_4278 |
| M. abscessus ATCC 19977 | MAB_4279 | - | 4e-10 | 27.16% (162) | hypothetical protein MAB_4279 |
| M. abscessus ATCC 19977 | MAB_1963 | - | 3e-09 | 27.92% (154) | MmpS family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2287c | - | 6e-15 | 30.95% (168) | hypothetical protein Mb2287c |
| M. gilvum PYR-GCK | Mflv_0270 | - | 8e-11 | 30.99% (142) | hypothetical protein Mflv_0270 |
| M. tuberculosis H37Rv | Rv2264c | - | 6e-15 | 30.95% (168) | hypothetical protein Rv2264c |
| M. leprae Br4923 | MLBr_00877 | mmpS3 | 5e-05 | 28.69% (122) | hypothetical protein MLBr_00877 |
| M. marinum M | MMAR_3358 | - | 2e-15 | 30.73% (179) | hypothetical protein MMAR_3358 |
| M. avium 104 | MAV_4815 | - | 1e-09 | 22.60% (146) | hypothetical protein MAV_4815 |
| M. smegmatis MC2 155 | MSMEG_4349 | - | 4e-12 | 28.18% (181) | hypothetical protein MSMEG_4349 |
| M. thermoresistible (build 8) | TH_2748 | - | 2e-07 | 29.91% (117) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_0584 | - | 2e-09 | 27.78% (144) | hypothetical protein MUL_0584 |
| M. vanbaalenii PYR-1 | Mvan_0590 | - | 6e-08 | 37.97% (79) | hypothetical protein Mvan_0590 |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 MATGARPALGLSIGVTNLAAVAAD-HSITRKPVLTLYRQRPPEVGVPSEN
Rv2264c|M.tuberculosis_H37Rv MATGARPALGLSIGVTNLAAVAAD-HSITRKPVLTLYRQRPPEVGVPSEN
MMAR_3358|M.marinum_M MAEGARPALGLSIGATNLAAVTAD-SAILRKPVLTLYRQRPPEIGLPSEN
MSMEG_4349|M.smegmatis_MC2_155 MVDGT----GLSIGATNLTAVQVGRAAVTRSPVLTRYPHRPSEVGVPGEN
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 ------------MTPTTVRMVLVEGEKADGVTVDHDVFHVDSADGSANVA
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 PRLDEPGLVITDFVDRVGDSVGIVAADGSVYRSEALVADALLALAYTATG
Rv2264c|M.tuberculosis_H37Rv PRLDEPGLVITDFVDRVGDSVGIVAADGSVYRSEALVADALLALAYTATG
MMAR_3358|M.marinum_M PRLDQSGLVISDFVDRVGDQIGIVAADGSVHRSEALVADALRALAYTATG
MSMEG_4349|M.smegmatis_MC2_155 PNLTERGLILTDFVDRVGDPVGIVAADGSSHRGEVLLAEALGALLAALTR
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 EHVVSAIQGTKESAETGGHHLRSIGVTWSDHTEATALRDALATHG-----
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 GRALPGSVTVTYPAHWGPAAVAALDSALRRASEWSHGTSSTAQPLSLLPD
Rv2264c|M.tuberculosis_H37Rv GRALPGSVTVTYPAHWGPAAVAALDSALRRASEWSHGTSSTAQPLSLLPD
MMAR_3358|M.marinum_M GHTLPASTAVAYPAHWTTSAVDALGAALGRVPEWSP----AGQPLLLIPD
MSMEG_4349|M.smegmatis_MC2_155 GRP-AGPVVVTHPAHWRPDQVEALRAALDAELSGAP----------MIAD
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 ----IDDVMLVSEGHAAASLAQAVGRAVGYDTTALLFVDRDTATLSVVQT
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 AAAALYAIRADPGIPARGIVAVCDFGGSGTGITLVDAADEYRPVAATVRH
Rv2264c|M.tuberculosis_H37Rv AAAALYAIRADPGIPARGIVAVCDFGGSGTGITLVDAADEYRPVAATVRH
MMAR_3358|M.marinum_M AAAALFAARANPGIPARGVVAVCDFGGSGTSITLADASGEYQPLGATVRH
MSMEG_4349|M.smegmatis_MC2_155 ATAALAALQDDPGVPARGVIAVCDFGGSGTSITLADADNGYQPI-ATVRH
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 DDGSVVKVLSRSLHSADAMAVLTEMAEAVAAQEAPPQG---MFVVGSGVD
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 QAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLRIECRKAKER
Rv2264c|M.tuberculosis_H37Rv QAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLRIECRKAKER
MMAR_3358|M.marinum_M PDFSGDLIDQSLLTYVMSEMPATGSFDPSGTSAIGSLNRLRAECRQAKEQ
MSMEG_4349|M.smegmatis_MC2_155 PDLSGALIDQALLTHVVDDLSAAGTIDLTGTSAIGSLSRLRAECRRAKER
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 ISSVKAHLEHLVSLPVSAPDDAELALARGAALASAAAPAFEATTVGLAYS
MLBr_00877|M.leprae_Br4923 --------------------------------------------------
MAV_4815|M.avium_104 -------------------------------------------------M
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 LSSSTVTTLTDALG---GDIRLTRNELEDTIRDSLDSVGRALEQTLARSG
Rv2264c|M.tuberculosis_H37Rv LSSSTVTTLTDALG---GDIRLTRNELEDTIRDSLDSVGRALEQTLARSG
MMAR_3358|M.marinum_M LSLSTVATLSDALPGVSGEVRLTRNELDETIRDSLDGFARVVEHTLQRAG
MSMEG_4349|M.smegmatis_MC2_155 LSTESATHLVAELPGHRSDVRLTRTELDEVLRAPLADFVAVLQDTLERNG
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 QDPDGTTAGSVYAGLAGADTQLAPVGAEDVVDEFAPTEMRPVDEGRKPFL
MLBr_00877|M.leprae_Br4923 -----------------------MSGPNPPGRENEESDSGNELSGELDPH
MAV_4815|M.avium_104 RVPTPRLPIGISGLAGAVSTIGAVASNGPRDEFHNQPTQHADFGMSQQPP
MUL_0584|M.ulcerans_Agy99 -----------------------MARYGPPDDFHSQPTQYGGYPAGGRPP
Mflv_0270|M.gilvum_PYR-GCK -------------------MARYGDSDDP-NYSDDDPTQLSNYAYG----
TH_2748|M.thermoresistible__bu -------------------VAVSRPPEDPSNYSDSEPTAYSDYTAGGSGG
Mb2287c|M.bovis_AF2122/97 IRTAELVAIVSVGGGANIPAVTTTLSGRFCVPVVRTPRPQLTAAFGGALW
Rv2264c|M.tuberculosis_H37Rv IRTAELVAIVSVGGGANIPAVTTTLSGRFCVPVVRTPRPQLTAAFGGALW
MMAR_3358|M.marinum_M VPAADLVAIVTVGGGANIPSVTTTLSGRFGVPVITAPRPQLTAATGGALR
MSMEG_4349|M.smegmatis_MC2_155 IHPGALAAVATIGGGARIPAVTTTLSEHLRVPVITAPHPELTAAIGGGLI
MAB_4278|M.abscessus_ATCC_1997 --------------------------------MSQTPKPPED--------
Mvan_0590|M.vanbaalenii_PYR-1 LVGSALTSLFVIG----VAALVVSLAISIRPTADQRPSPAQSAIVPSQLP
MLBr_00877|M.leprae_Br4923 NGVESVDELVPVPDSDLVTASDHTSETEVYSQAYSAPEAEHFTAVPYVPA
*
MAV_4815|M.avium_104 TGELPP--------------------------PGFPPDRPEGFEQP----
MUL_0584|M.ulcerans_Agy99 AGAPPSRP--------------------AGPQSGPPPQAPPGPDSPNPSV
Mflv_0270|M.gilvum_PYR-GCK ----------------------------------DYEQAPPPDAEP----
TH_2748|M.thermoresistible__bu YVPGYG--------------------------GGEYGGPPGPPEEP----
Mb2287c|M.bovis_AF2122/97 AARRPGDTSATVLTAVTSAT------------ATAPADAPASVLQPALAW
Rv2264c|M.tuberculosis_H37Rv AARRPGDTSATVLTAVTSAT------------ATAPADAPASVLQPALAW
MMAR_3358|M.marinum_M AARGPGDSSATVLTSAAPMTQTAMAPLDPDVGAVAAADAPVSALQPALAW
MSMEG_4349|M.smegmatis_MC2_155 AVRGTVRDDATALAPAAPVPAETGEGTGTATMAAALMAPEPPAAPQALAW
MAB_4278|M.abscessus_ATCC_1997 --------------------------------ESYFSEMIEESEKP----
Mvan_0590|M.vanbaalenii_PYR-1 APAPAPAR----------------------QEAADVPANPPSAETIKP--
MLBr_00877|M.leprae_Br4923 DLRLYDYD------------------------ESSVYDEPGAAP------
MAV_4815|M.avium_104 --GNVDPFDQ---------------------------------EAEPTPW
MUL_0584|M.ulcerans_Agy99 QFASAEGYDQEK------------------------------PEAEPKPW
Mflv_0270|M.gilvum_PYR-GCK ----------------------------------------------PVPW
TH_2748|M.thermoresistible__bu ----------------------------------------------PVPW
Mb2287c|M.bovis_AF2122/97 SEADEDSHIGP---------APGYTAARPSLSFDHDAHAEPEPKSPPIPW
Rv2264c|M.tuberculosis_H37Rv SEADEDSHIGP---------APGYTAARPSLSFDHDAHAEPEPKSPPIPW
MMAR_3358|M.marinum_M SEADDQSRAMPV-VGDDYSGASGYTSARPQLTFEENARAEPAPKSVVIPW
MSMEG_4349|M.smegmatis_MC2_155 SDADDVPDVAPPDEYVDDSAGSSVYGPRPQVQFAD---PEPD-AAAAQPW
MAB_4278|M.abscessus_ATCC_1997 -----------------------------------------------APW
Mvan_0590|M.vanbaalenii_PYR-1 ----------------------------------------------PIPV
MLBr_00877|M.leprae_Br4923 ----------------------------------------------RWPW
*
MAV_4815|M.avium_104 YRRPAMLIAWVVSVVVLIGLIVFGVIELIGGQQGVSHVPKSTTSTTTTAT
MUL_0584|M.ulcerans_Agy99 YRNPVTLTGWALLVMILIALIVYGIIELISDRQGTGN-PSTTTPSTTTST
Mflv_0270|M.gilvum_PYR-GCK YRKPAALVGLGALGAVLIALIVFGLAKAITGDSDSETTPTSSLTPVTTTS
TH_2748|M.thermoresistible__bu YRKPAALVAFGALGAVLLGLIVFALIRLTSGDDASSETATTTTTTTTTTG
Mb2287c|M.bovis_AF2122/97 YRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPP
Rv2264c|M.tuberculosis_H37Rv YRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPP
MMAR_3358|M.marinum_M YRLPGVIIVATVVAVLLVGAAVAIALSSGEQP-ATRSPEATTSPPTSAPA
MSMEG_4349|M.smegmatis_MC2_155 YRRRGAVVGAGAAAVVAVIAAVALAVTRDDGDVAVPASTSTPVTTTEEVP
MAB_4278|M.abscessus_ATCC_1997 YRTGPAIVG-TIAAIIAIVAVLMTIVLSTDKRVVRDNTPLTSTPSVSSTA
Mvan_0590|M.vanbaalenii_PYR-1 VQEAPQQAPRTVYVEQAPAPAVPAPAPAAPPPAPAPAAPPVVAPVVVPPP
MLBr_00877|M.leprae_Br4923 VVGVAAILAAISLVVSVSLLFTRTDTSKLSTPTTGRSTPPVQDEITTVKP
.
MAV_4815|M.avium_104 TTTTTTTTTTTTPSSTSPGSSAEQPPAQQ-----------------PSQQ
MUL_0584|M.ulcerans_Agy99 TTAETATTTPPTTTTTTVAP-ATTPRVQP-----------------PPQQ
Mflv_0270|M.gilvum_PYR-GCK APAAVPPATVTETASESATTTTEPTTTTT-----------------TTEP
TH_2748|M.thermoresistible__bu APVAPPPATVTQTVPPATTTPAEEPSPPP-----------------TTTQ
Mb2287c|M.bovis_AF2122/97 PSPAPASDGPTTEPAPPVQAPATGGPAPP-LQQPLPPPPTTTNTQPAVTT
Rv2264c|M.tuberculosis_H37Rv PSPAPASDGPTTEPAPPVQAPATGGPAPP-LQQPLPPPPTTTNTQPAVTT
MMAR_3358|M.marinum_M AVP-PVTDAGTSAPAPSTQPPASQEPAPP-PTQQAPPPPSTEAPPPSTTQ
MSMEG_4349|M.smegmatis_MC2_155 PPPPPEAVD---QPAP-VQTVTEVLPAPETVVQTVPPPPVEQPAEPPAET
MAB_4278|M.abscessus_ATCC_1997 PTVQLTSPSESSTAVPTATEAPSEPAAPV-----------------QTSE
Mvan_0590|M.vanbaalenii_PYR-1 VIVLPRPQWTPPKPAWTWPTQTVEPDEPD------------EPWQPPWED
MLBr_00877|M.leprae_Br4923 PPPSTETSTATETQTVTVTPLPPPSATST-------------AVPPSSVV
. .
MAV_4815|M.avium_104 PGGGQTQQPSHHH-RLPQLPPVITIPQVPT------VITVPPGLR-----
MUL_0584|M.ulcerans_Agy99 P----THPPTHRFPHLPPLPSVITIPGVPT------TITLPPHLP-----
Mflv_0270|M.gilvum_PYR-GCK TTTTTTTTPTTTTTPSTSVSTSTSTSTVTQTETQTETVTEPPPAPPTP--
TH_2748|M.thermoresistible__bu TPTTTTTTTTTTTTESP--TTTTTTETVTQTETETQTVTAPPDEGE----
Mb2287c|M.bovis_AF2122/97 DVITPAPTTPASAPPATTQPPATTQPPATTS-------PSPPPIPPIPPI
Rv2264c|M.tuberculosis_H37Rv DVITPAPTTPASAPPATTQPPATTQPPATTS-------PSPPPIPPIPPI
MMAR_3358|M.marinum_M APVTTQPPATTEAPPATTQPPVTTEAPPTTQAPATQQLPTPPPIPPIPQI
MSMEG_4349|M.smegmatis_MC2_155 PPPTTEAPPPTSEAPPTTEAPTTTEAPTTTEAP----TSTPPRWSPTAPY
MAB_4278|M.abscessus_ATCC_1997 PTYYETPTSTIYRYPIPAIPSPPPIPPIPAIP----QIPQIPQIPQIPGL
Mvan_0590|M.vanbaalenii_PYR-1 DDDDKPTPTLPTQTVVPTRPQVPTVPQVPTVP----QVPQQPQWPGSGSG
MLBr_00877|M.leprae_Br4923 PPPPTTPTTTVTTLTGPRQVTYSVTGTKAPGDIISVTYVDASGRRRTQHN
. . . .
MAV_4815|M.avium_104 --------------------------------------------------
MUL_0584|M.ulcerans_Agy99 --------------------------------------------------
Mflv_0270|M.gilvum_PYR-GCK --------------------------------------------------
TH_2748|M.thermoresistible__bu --------------------------------------------------
Mb2287c|M.bovis_AF2122/97 PEIPQLP----PGIPQVPGIGQFSAISGS---------------------
Rv2264c|M.tuberculosis_H37Rv PEIPQLP----PGIPQVPGIGQFSAISGS---------------------
MMAR_3358|M.marinum_M PPIPQIPGIGFPQVPQVPQIPQVPQVPGVPGFGQVIAPQVIAPQVIAPQA
MSMEG_4349|M.smegmatis_MC2_155 PTIPGLP---WVPAPQVPG-GQAG--------------------------
MAB_4278|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_0590|M.vanbaalenii_PYR-1 AGSGSGSSSGSYGGSGSYGGGRGDSGSSRGGSGSGVPGDVNGDGCFLIFC
MLBr_00877|M.leprae_Br4923 VYIPWSMTVTPISQSDVGSVEAFSLFRVSKLNCLITTSDGTVLSSNSNDA
MAV_4815|M.avium_104 -------
MUL_0584|M.ulcerans_Agy99 -------
Mflv_0270|M.gilvum_PYR-GCK -------
TH_2748|M.thermoresistible__bu -------
Mb2287c|M.bovis_AF2122/97 -------
Rv2264c|M.tuberculosis_H37Rv -------
MMAR_3358|M.marinum_M ANGQ---
MSMEG_4349|M.smegmatis_MC2_155 -------
MAB_4278|M.abscessus_ATCC_1997 -------
Mvan_0590|M.vanbaalenii_PYR-1 APGGGRG
MLBr_00877|M.leprae_Br4923 PQTSC--