For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STQVYPERGLPELTGDARVDRWREHRAKVRAELVEATLNAIDELGPDLSIDDVLKSAGISRPKLYRFFTD KEALFAAVAMRVQELVVERVVSNIDLSVSLLELFRTGMAGYVDLVDERPNLVRFLLGVQYANATSLIESG RPLSDAIAQLVGSVFSSRGGNADHIEYVIDAMLASTGIAVLRWFDEPVISKETLVDELVVYVWGGLAASA KARGVELNPDDPILLPTD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4026c | - | - | 100% (229) | transcriptional regulatory protein TetR |
M. abscessus ATCC 19977 | MAB_2968 | - | 6e-24 | 30.99% (213) | TetR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4086 | - | 4e-20 | 27.98% (193) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3076c | - | 2e-31 | 34.08% (223) | AsnC family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4290 | - | 1e-29 | 34.25% (219) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv3050c | - | 2e-31 | 34.08% (223) | AsnC family transcriptional regulator |
M. leprae Br4923 | MLBr_01733 | - | 1e-30 | 32.29% (223) | putative TetR-family transcriptional regulator |
M. marinum M | MMAR_1643 | - | 5e-30 | 33.49% (218) | AsnC family transcriptional regulator |
M. avium 104 | MAV_3917 | - | 2e-29 | 33.94% (218) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_2309 | - | 1e-29 | 32.89% (225) | transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_1826 | - | 4e-30 | 34.40% (218) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
M. ulcerans Agy99 | MUL_1879 | - | 4e-30 | 33.49% (218) | AsnC family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_2056 | - | 3e-30 | 33.48% (224) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1643|M.marinum_M -----------------------------MRRISRPHPNADAGVKVDARS MUL_1879|M.ulcerans_Agy99 -----------------------------MRRISRAHLNADAGVKVDARS Mb3076c|M.bovis_AF2122/97 -----------------------------MVRIPRPHPSAKPGVKVDARS Rv3050c|M.tuberculosis_H37Rv -----------------------------MVRIPRPHPSAKPGVKVDARS MLBr_01733|M.leprae_Br4923 MTRRSIHTRKPLKWSGCAGQHVRSGKVFDVGRISLSYPSMKPGVKIDARS MAV_3917|M.avium_104 --------------------------MVRMPRPARPHSATKPGAKVDARS Mflv_4290|M.gilvum_PYR-GCK -----------------------------MRRGSRARAAEETGVKVDARS Mvan_2056|M.vanbaalenii_PYR-1 ----------------------MAGYSDRVRRGSRARAAEEPGVKVDARS MSMEG_2309|M.smegmatis_MC2_155 -----------------------------MRRGSRSHSGG-PGVKVDARS TH_1826|M.thermoresistible__bu ---------------------------------------------VDARS MAB_4026c|M.abscessus_ATCC_199 ------------------------------MSTQVYPERGLPELTGDARV *** MMAR_1643|M.marinum_M ERWREHRKKVRNEIVEAAFRAIDRLGPELSVREIAEEAGTAKPKIYRHFT MUL_1879|M.ulcerans_Agy99 ERWREHRKKVRNEIVEAAFRAIDRLGPELSVREIAEEAGTAKPKIYRHFT Mb3076c|M.bovis_AF2122/97 ERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFT Rv3050c|M.tuberculosis_H37Rv ERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFT MLBr_01733|M.leprae_Br4923 ERWREHRKKVRGEIVDAAFRALDRLGPEVSVREIAEEAGTAKPKIYRHFT MAV_3917|M.avium_104 ERWREHRKKVRNEIVDAAFRAIDRLGPELSVREIAEEAGTAKPKIYRHFH Mflv_4290|M.gilvum_PYR-GCK ERWREHRKKVRSEIVDAAFRAIDRLGPEVSLREIAEEAGTAKPKIYRHFT Mvan_2056|M.vanbaalenii_PYR-1 ERWREHRKKVRSEIVDAAFRAIDRLGPEVSLREIAEEAGTAKPKIYRHFT MSMEG_2309|M.smegmatis_MC2_155 ERWREHRKKVRSEIVDAAFRAIDRLGPELSLREIAEEAGTAKPKIYRHFT TH_1826|M.thermoresistible__bu ERWREHRKKVRAEIVDAAYRAIDRLGPELSLREIAAEAGTAKPKIYRHFT MAB_4026c|M.abscessus_ATCC_199 DRWREHRAKVRAELVEATLNAIDELGPDLSIDDVLKSAGISRPKLYRFFT :****** *** *:*:*: .*:*.***::*: :: .** ::**:**.* MMAR_1643|M.marinum_M DKSDLFVAIGERLRDMLWTSIFPSINLATDSAREVIRRSVEEYVSLVDKH MUL_1879|M.ulcerans_Agy99 DKSDLFVAIRERLRDMLWTSIFPSINLATDSAREVIRRSVEEYVSLVDKH Mb3076c|M.bovis_AF2122/97 DKSDLLEAIGMRLRDMLWAAIFPSLDLATDSAREVIRRSVEEYVNLVDQH Rv3050c|M.tuberculosis_H37Rv DKSDLLEAIGMRLRDMLWAAIFPSLDLATDSAREVIRRSVEEYVNLVDQH MLBr_01733|M.leprae_Br4923 DKSDLFEAIGIRLRDMLWAAIFPAIDLATDSAREIIRRSVDEYVSLVDKH MAV_3917|M.avium_104 DKSDLFQAIGERLRDMLWTAIFPSIDLKTDSAREVIRRSVEEYVTLVDKH Mflv_4290|M.gilvum_PYR-GCK DKADLFQAIGQRMRDMLWAAIFPSIDISTDPARTVVFRAVEQYVRLVDEH Mvan_2056|M.vanbaalenii_PYR-1 DKSDLFQAIGQRMRDMLWAAIFPSINISTDAARTVVFRAVEQYVRLVDEH MSMEG_2309|M.smegmatis_MC2_155 DKSDLFQAIGERLRDMLWSAIFPSINLASDPAREVIRRSVEQYVRLVDEH TH_1826|M.thermoresistible__bu DKADLHQAIGQRLRDMLWAAIFPSIDLSADSGREIIRRSVEQYVRLVDQH MAB_4026c|M.abscessus_ATCC_199 DKEALFAAVAMRVQELVVERVVSNIDLSVS-LLELFRTGMAGYVDLVDER ** * *: *::::: :.. ::: . :. .: ** ***:: MMAR_1643|M.marinum_M PNVLRVFIQGRFATQSEATVRTLNEGREITLTFAEMFNNELREMELNRAA MUL_1879|M.ulcerans_Agy99 PNVLRVFIQGRFATQSEATVRTLNEGREITLTFAEMFNNELREMELNRAA Mb3076c|M.bovis_AF2122/97 PNVLRVFIQGRSAKQSEATVRTLNEGREITLAMAEMFNNELREMELNRAA Rv3050c|M.tuberculosis_H37Rv PNVLRVFIQGRSAKQSEATVRTLNEGREITLAMAEMFNNELREMELNRAA MLBr_01733|M.leprae_Br4923 PNVLRVFIQGRFSAQSEATVRTLDEGREITLTMAEMFNNELREMELNRAA MAV_3917|M.avium_104 PNVLRVFIQGRSTGTPQSTVTILNEGREITLAMADLFDNELREMELDHAA Mflv_4290|M.gilvum_PYR-GCK PNVVRFLMQGRFAEQTESAMRALNEGRDITLAMADMFNNELKDMQLDYAA Mvan_2056|M.vanbaalenii_PYR-1 PNVVRFLMQGRFAEQSESAMRALNEGRDITLGIAEMFNNELSDMELDNAA MSMEG_2309|M.smegmatis_MC2_155 PNVLRFLIQGRFAEQSESTMRALNEGRGITLAMADMFSHELREMELDGAA TH_1826|M.thermoresistible__bu PNVLRFLLQGRFADQSASAARALNEGRDITLAMADMFDNELREIELDPTA MAB_4026c|M.abscessus_ATCC_199 PNLVRFLLGVQYAN----ATSLIESGRPLSDAIAQLVGSVFSSRGGNADH **::*.:: : : : ::.** :: :*::.. : . : MMAR_1643|M.marinum_M FELAAFAAFGSAASATEWWLGPEPDSPRRMPHDQFVAHLTTIMMGVIVGT MUL_1879|M.ulcerans_Agy99 FELAAFAAFGSAASATEWWLGPEPDSPRRMPHDQFVAHLTTIMMGVIVGT Mb3076c|M.bovis_AF2122/97 LELAAFAAFGSAASATEWWLGPEPDSPRRMPREQFVAHLTTIMMGVIVGT Rv3050c|M.tuberculosis_H37Rv LELAAFAAFGSAASATEWWLGPEPDSPRRMPREQFVAHLTTIMMGVIVGT MLBr_01733|M.leprae_Br4923 SELAAFAAFGSVASATEWWLGPEPDSPRRMPREQFVAHLTIIMMAVIVGT MAV_3917|M.avium_104 VELAAHAAFGSAASATEWWLGPEPDSPRLMSRAQFVAHLSTIMMAVIIGT Mflv_4290|M.gilvum_PYR-GCK FELAGFATFGAAASATDWWLGAERDSPRRLPSEKFVDYLTKIMVGSINGT Mvan_2056|M.vanbaalenii_PYR-1 FELAGFATFGAAASATDWWLGAEQDSPRRLPSEKFVDYLTTIMVGSINGT MSMEG_2309|M.smegmatis_MC2_155 IELAAFATFGAAASATDWWLGSKEDSPRRMPADEFVNHLTTIMVGSINGT TH_1826|M.thermoresistible__bu LELAAHAAFGSIASATDWWLGAETDSPRRMPSDQFIAHLTTITVGAINGT MAB_4026c|M.abscessus_ATCC_199 IEYVIDAMLASTGIAVLRWFDEP-----VISKETLVDELVVYVWGGLAAS * . * :.: . *. *:. :. :: * . : .: MMAR_1643|M.marinum_M AEALGIAMDPDKPIHDAVPAPTADRR MUL_1879|M.ulcerans_Agy99 AEALGIAMDPDKPIHDAVPAPTADRR Mb3076c|M.bovis_AF2122/97 AEALGIAVDPDQPIHDAVPNNPAVR- Rv3050c|M.tuberculosis_H37Rv AEALGIAVDPDQPIHDAVPNNPAVR- MLBr_01733|M.leprae_Br4923 AETLGISMNPDRPIHDAVPLDRSAS- MAV_3917|M.avium_104 AETLGITMNPDQPIHDAVVRKPAVS- Mflv_4290|M.gilvum_PYR-GCK CEVLGVKIDPDVPLHEGVTRREQVA- Mvan_2056|M.vanbaalenii_PYR-1 CEVLGIKIDPDVPLHEGVKRREQVA- MSMEG_2309|M.smegmatis_MC2_155 CELLGIRIDPDLPLHEGVQRRERAS- TH_1826|M.thermoresistible__bu CEMLGIKIDPDLPLHAGVRRREDVA- MAB_4026c|M.abscessus_ATCC_199 AKARGVELNPDDPILLPTD------- .: *: ::** *: .