For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGRQIRHERASAQHLGAPMRLSTAYPAHMRKLRRGSDLRRSHPTATRTSSVNPRALTYEAAGATSPCESI WSAAPAGLRRFEQTISIGHGADLWDAAAHAVANWEVKQRSGFRVHPQKTVSEGAEFVISFGWGPLAVHEP VRIVAVVDTDTRRGFAYGTLPGHPVSGEEAFIVHRDADGAVFLTLRSLTRPAPSGLWRRIFPVLLLAQKA FRRRYLRSLLP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3457 | - | - | 100% (221) | hypothetical protein MAB_3457 |
M. abscessus ATCC 19977 | MAB_2902 | - | 2e-15 | 36.75% (166) | hypothetical protein MAB_2902 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2649 | - | 5e-19 | 35.15% (165) | hypothetical protein Mb2649 |
M. gilvum PYR-GCK | Mflv_3841 | - | 6e-20 | 37.28% (169) | hypothetical protein Mflv_3841 |
M. tuberculosis H37Rv | Rv2616 | - | 4e-19 | 35.15% (165) | hypothetical protein Rv2616 |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_2085 | - | 2e-18 | 34.68% (173) | hypothetical protein MMAR_2085 |
M. avium 104 | MAV_3495 | - | 3e-22 | 40.72% (167) | hypothetical protein MAV_3495 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3259 | - | 3e-18 | 36.53% (167) | hypothetical protein MUL_3259 |
M. vanbaalenii PYR-1 | Mvan_2554 | - | 2e-20 | 39.05% (169) | hypothetical protein Mvan_2554 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2649|M.bovis_AF2122/97 ---------------------------------------------MDLNA Rv2616|M.tuberculosis_H37Rv ---------------------------------------------MDLNA MMAR_2085|M.marinum_M ---------------------------------------------MDLRA MUL_3259|M.ulcerans_Agy99 ---------------------------------------------MDLRV MAV_3495|M.avium_104 ---------------------------------------------MDLRA Mflv_3841|M.gilvum_PYR-GCK ---------------------------------------------MKLTD Mvan_2554|M.vanbaalenii_PYR-1 ---------------------------------------------MKLTD MAB_3457|M.abscessus_ATCC_1997 MGRQIRHERASAQHLGAPMRLSTAYPAHMRKLRRGSDLRRSHPTATRTSS Mb2649|M.bovis_AF2122/97 LADLPLTYPEVGATATG-----RLPAGYNHLDVSTQIGTGRQRFEQAADA Rv2616|M.tuberculosis_H37Rv LADLPLTYPEVGATATG-----RLPAGYNHLDVSTQIGTGRQRFEQAADA MMAR_2085|M.marinum_M LSGQQLTYPEVGATAAG-----QLPPGYAHLSVSDQIGTGRKRFEEAAHA MUL_3259|M.ulcerans_Agy99 LSGQQLTYPEVGATAAG-----QLPPGYAHLSVSDQIGTGRKRFEEAAHA MAV_3495|M.avium_104 LEELPLTYSEVGATASG-----DLPAGYHHQHVERQIGTGAARFEQAAGA Mflv_3841|M.gilvum_PYR-GCK LAGKSLTYTEVGATAG------ALPAGYHHVNKSAVIGRGRERFERAGND Mvan_2554|M.vanbaalenii_PYR-1 LAGKALTYPEVGATAT------TMPAGYRHLRKSAVIGSGRERFEQAAAE MAB_3457|M.abscessus_ATCC_1997 VNPRALTYEAAGATSPCESIWSAAPAGLRRFEQTISIGHGADLWDAAAHA : *** .***: *.* : ** * :: *. Mb2649|M.bovis_AF2122/97 VMHWGMQRNAGLRVRASSETAIVSAVVLVGIA----FLRAPCRVVYVIDE Rv2616|M.tuberculosis_H37Rv VMHWGMQRNAGLRVRASSETAVVSAVVLVGIA----FLRAPCRVVYVIDE MMAR_2085|M.marinum_M VMHWGMQRGAGLAVRATSDTVAVSTVAVIQMMG---VLRAPCRVVYVIDE MUL_3259|M.ulcerans_Agy99 VMHWGMQRGAGLAVWATSDTVAVSTVAVIQMMG---VSRAPCRVVYVIDE MAV_3495|M.avium_104 VLHWGMQRGSGLRVQASSEVAVVDAVVVVRLG----FVPAPCRVVYVVDE Mflv_3841|M.gilvum_PYR-GCK GMQWGMLRGAGLRVEATTAVAEVGAEVLVHLG----PVVAPCRVVYVVDE Mvan_2554|M.vanbaalenii_PYR-1 GMRWGMLRGAGLRVEATAPVAAVGAEVLVHLG----PVVAPCRVVYVVDE MAB_3457|M.abscessus_ATCC_1997 VANWEVKQRSGFRVHP-QKTVSEGAEFVISFGWGPLAVHEPVRIVAVVDT .* : : :*: * . .. .: :: : * *:* *:* Mb2649|M.bovis_AF2122/97 PDVRGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPAT-WASK Rv2616|M.tuberculosis_H37Rv PDVRGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPAT-WASK MMAR_2085|M.marinum_M PDIRGFAYGTLPGHPECGEERFAIRYDPDTSGVFAEVSSFSRPAT-WWSK MUL_3259|M.ulcerans_Agy99 PDIRGFAYGTLPGHPECGEERFAIRYDPDTSGVFVEVSSFSRPAT-WWSK MAV_3495|M.avium_104 PDIRGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPAT-WWAR Mflv_3841|M.gilvum_PYR-GCK QDRRGFAYGTLPGHAEAGEELFLVRYDPSTDLVHAEVRAFSRHAT-WWSR Mvan_2554|M.vanbaalenii_PYR-1 PDRRGFAYGTLPGHAESGEELFLVRYDPSAGDVVAEVAAFSRHAT-WWSR MAB_3457|M.abscessus_ATCC_1997 DTRRGFAYGTLPGHPVSGEEAFIVHRDADG-AVFLTLRSLTRPAPSGLWR ***.*******. .*** * :: *. * : :::* *. : Mb2649|M.bovis_AF2122/97 AAGPLGAVTQRFIAQRYLRAV----------------------------- Rv2616|M.tuberculosis_H37Rv AAGPLGAVTQRFIAQRYLRAV----------------------------- MMAR_2085|M.marinum_M AGGPFVALTQRIIAKRYLRGV----------------------------- MUL_3259|M.ulcerans_Agy99 AGGPFVALTQRIIAKRYLRGVWAASAEPATTRGHAHRANSSRAPEHICSI MAV_3495|M.avium_104 AGGPVLRVGQRVIARRYLRAV----------------------------- Mflv_3841|M.gilvum_PYR-GCK LGAPLTSAIQRAVTDRYLRAL----------------------------- Mvan_2554|M.vanbaalenii_PYR-1 LGAPVTSLMQRVVTDRYLRAL----------------------------- MAB_3457|M.abscessus_ATCC_1997 RIFPVLLLAQKAFRRRYLRSLLP--------------------------- *. *: . ****.: Mb2649|M.bovis_AF2122/97 -------------------------------------------------- Rv2616|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2085|M.marinum_M -------------------------------------------------- MUL_3259|M.ulcerans_Agy99 TSPAGAPSGIIPTPWPASTGATRRSSAALAAASSARASASAASAVSLPFQ MAV_3495|M.avium_104 -------------------------------------------------- Mflv_3841|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2554|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3457|M.abscessus_ATCC_1997 -------------------------------------------------- Mb2649|M.bovis_AF2122/97 -------------- Rv2616|M.tuberculosis_H37Rv -------------- MMAR_2085|M.marinum_M -------------- MUL_3259|M.ulcerans_Agy99 RATKSLVNTRDGNR MAV_3495|M.avium_104 -------------- Mflv_3841|M.gilvum_PYR-GCK -------------- Mvan_2554|M.vanbaalenii_PYR-1 -------------- MAB_3457|M.abscessus_ATCC_1997 --------------