For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAARFEQAAGAVLHWGMQRGSGLRVQASSEV AVVDAVVVVRLGFVPAPCRVVYVVDEPDIRGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPA TWWARAGGPVLRVGQRVIARRYLRAV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_3495 | - | - | 100% (166) | hypothetical protein MAV_3495 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2649 | - | 6e-66 | 71.69% (166) | hypothetical protein Mb2649 |
| M. gilvum PYR-GCK | Mflv_3841 | - | 2e-50 | 60.24% (166) | hypothetical protein Mflv_3841 |
| M. tuberculosis H37Rv | Rv2616 | - | 5e-66 | 72.29% (166) | hypothetical protein Rv2616 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2902 | - | 3e-47 | 55.90% (161) | hypothetical protein MAB_2902 |
| M. marinum M | MMAR_2085 | - | 2e-62 | 65.87% (167) | hypothetical protein MMAR_2085 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_3259 | - | 6e-61 | 64.67% (167) | hypothetical protein MUL_3259 |
| M. vanbaalenii PYR-1 | Mvan_2554 | - | 3e-51 | 61.45% (166) | hypothetical protein Mvan_2554 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3841|M.gilvum_PYR-GCK MKLTDLAGKSLTYTEVGATAG-ALPAGYHHVNKSAVIGRGRERFERAGND
Mvan_2554|M.vanbaalenii_PYR-1 MKLTDLAGKALTYPEVGATAT-TMPAGYRHLRKSAVIGSGRERFEQAAAE
MMAR_2085|M.marinum_M MDLRALSGQQLTYPEVGATAAGQLPPGYAHLSVSDQIGTGRKRFEEAAHA
MUL_3259|M.ulcerans_Agy99 MDLRVLSGQQLTYPEVGATAAGQLPPGYAHLSVSDQIGTGRKRFEEAAHA
Mb2649|M.bovis_AF2122/97 MDLNALADLPLTYPEVGATATGRLPAGYNHLDVSTQIGTGRQRFEQAADA
Rv2616|M.tuberculosis_H37Rv MDLNALADLPLTYPEVGATATGRLPAGYNHLDVSTQIGTGRQRFEQAADA
MAV_3495|M.avium_104 MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAARFEQAAGA
MAB_2902|M.abscessus_ATCC_1997 -----MSQLPFTYPERGATAG-ELPAGYHHVRESRQIGTGEARFEEAAAR
: :**.* **** :*.** * . ** * ***.*.
Mflv_3841|M.gilvum_PYR-GCK GMQWGMLRGAGLRVEATTAVAEVGAEVLVHLG-PVVAPCRVVYVVDEQDR
Mvan_2554|M.vanbaalenii_PYR-1 GMRWGMLRGAGLRVEATAPVAAVGAEVLVHLG-PVVAPCRVVYVVDEPDR
MMAR_2085|M.marinum_M VMHWGMQRGAGLAVRATSDTVAVSTVAVIQMMGVLRAPCRVVYVIDEPDI
MUL_3259|M.ulcerans_Agy99 VMHWGMQRGAGLAVWATSDTVAVSTVAVIQMMGVSRAPCRVVYVIDEPDI
Mb2649|M.bovis_AF2122/97 VMHWGMQRNAGLRVRASSETAIVSAVVLVGIA-FLRAPCRVVYVIDEPDV
Rv2616|M.tuberculosis_H37Rv VMHWGMQRNAGLRVRASSETAVVSAVVLVGIA-FLRAPCRVVYVIDEPDV
MAV_3495|M.avium_104 VLHWGMQRGSGLRVQASSEVAVVDAVVVVRLG-FVPAPCRVVYVVDEPDI
MAB_2902|M.abscessus_ATCC_1997 LMRFGIQHGIGLRVLTSAPEVGEGVNVATRLW-PFWALCRIVYVVDEPNR
:::*: :. ** * ::: . .. . : * **:***:** :
Mflv_3841|M.gilvum_PYR-GCK RGFAYGTLPGHAEAGEELFLVRYDPSTDLVHAEVRAFSRHATWWSRLGAP
Mvan_2554|M.vanbaalenii_PYR-1 RGFAYGTLPGHAESGEELFLVRYDPSAGDVVAEVAAFSRHATWWSRLGAP
MMAR_2085|M.marinum_M RGFAYGTLPGHPECGEERFAIRYDPDTSGVFAEVSSFSRPATWWSKAGGP
MUL_3259|M.ulcerans_Agy99 RGFAYGTLPGHPECGEERFAIRYDPDTSGVFVEVSSFSRPATWWSKAGGP
Mb2649|M.bovis_AF2122/97 RGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPATWASKAAGP
Rv2616|M.tuberculosis_H37Rv RGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPATWASKAAGP
MAV_3495|M.avium_104 RGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPATWWARAGGP
MAB_2902|M.abscessus_ATCC_1997 RGFAYGTLQGHPETGEEAFIVRRDPSNDVVSVEITAFSRPSFWWIRLGNP
***.**** **. *** * :* ** . * .*: :*** : * : . *
Mflv_3841|M.gilvum_PYR-GCK LTSAIQRAVTDRYLRAL---------------------------------
Mvan_2554|M.vanbaalenii_PYR-1 VTSLMQRVVTDRYLRAL---------------------------------
MMAR_2085|M.marinum_M FVALTQRIIAKRYLRGV---------------------------------
MUL_3259|M.ulcerans_Agy99 FVALTQRIIAKRYLRGVWAASAEPATTRGHAHRANSSRAPEHICSITSPA
Mb2649|M.bovis_AF2122/97 LGAVTQRFIAQRYLRAV---------------------------------
Rv2616|M.tuberculosis_H37Rv LGAVTQRFIAQRYLRAV---------------------------------
MAV_3495|M.avium_104 VLRVGQRVIARRYLRAV---------------------------------
MAB_2902|M.abscessus_ATCC_1997 LAKQLQRIVTQRYLRAL---------------------------------
. ** :: ****.:
Mflv_3841|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2554|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2085|M.marinum_M --------------------------------------------------
MUL_3259|M.ulcerans_Agy99 GAPSGIIPTPWPASTGATRRSSAALAAASSARASASAASAVSLPFQRATK
Mb2649|M.bovis_AF2122/97 --------------------------------------------------
Rv2616|M.tuberculosis_H37Rv --------------------------------------------------
MAV_3495|M.avium_104 --------------------------------------------------
MAB_2902|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_3841|M.gilvum_PYR-GCK ----------
Mvan_2554|M.vanbaalenii_PYR-1 ----------
MMAR_2085|M.marinum_M ----------
MUL_3259|M.ulcerans_Agy99 SLVNTRDGNR
Mb2649|M.bovis_AF2122/97 ----------
Rv2616|M.tuberculosis_H37Rv ----------
MAV_3495|M.avium_104 ----------
MAB_2902|M.abscessus_ATCC_1997 ----------