For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDLNALADLPLTYPEVGATATGRLPAGYNHLDVSTQIGTGRQRFEQAADAVMHWGMQRNAGLRVRASSET AIVSAVVLVGIAFLRAPCRVVYVIDEPDVRGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPA TWASKAAGPLGAVTQRFIAQRYLRAV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2649 | - | - | 100% (166) | hypothetical protein Mb2649 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3841 | - | 2e-46 | 57.83% (166) | hypothetical protein Mflv_3841 |
M. tuberculosis H37Rv | Rv2616 | - | 1e-92 | 99.40% (166) | hypothetical protein Rv2616 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2902 | - | 3e-40 | 51.55% (161) | hypothetical protein MAB_2902 |
M. marinum M | MMAR_2085 | - | 2e-64 | 72.46% (167) | hypothetical protein MMAR_2085 |
M. avium 104 | MAV_3495 | - | 7e-66 | 71.69% (166) | hypothetical protein MAV_3495 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3259 | - | 4e-62 | 70.06% (167) | hypothetical protein MUL_3259 |
M. vanbaalenii PYR-1 | Mvan_2554 | - | 3e-48 | 59.64% (166) | hypothetical protein Mvan_2554 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3841|M.gilvum_PYR-GCK MKLTDLAGKSLTYTEVGATAG-ALPAGYHHVNKSAVIGRGRERFERAGND Mvan_2554|M.vanbaalenii_PYR-1 MKLTDLAGKALTYPEVGATAT-TMPAGYRHLRKSAVIGSGRERFEQAAAE Mb2649|M.bovis_AF2122/97 MDLNALADLPLTYPEVGATATGRLPAGYNHLDVSTQIGTGRQRFEQAADA Rv2616|M.tuberculosis_H37Rv MDLNALADLPLTYPEVGATATGRLPAGYNHLDVSTQIGTGRQRFEQAADA MMAR_2085|M.marinum_M MDLRALSGQQLTYPEVGATAAGQLPPGYAHLSVSDQIGTGRKRFEEAAHA MUL_3259|M.ulcerans_Agy99 MDLRVLSGQQLTYPEVGATAAGQLPPGYAHLSVSDQIGTGRKRFEEAAHA MAV_3495|M.avium_104 MDLRALEELPLTYSEVGATASGDLPAGYHHQHVERQIGTGAARFEQAAGA MAB_2902|M.abscessus_ATCC_1997 -----MSQLPFTYPERGATAG-ELPAGYHHVRESRQIGTGEARFEEAAAR : :**.* **** :*.** * . ** * ***.*. Mflv_3841|M.gilvum_PYR-GCK GMQWGMLRGAGLRVEATTAVAEVGAEVLVHLG-PVVAPCRVVYVVDEQDR Mvan_2554|M.vanbaalenii_PYR-1 GMRWGMLRGAGLRVEATAPVAAVGAEVLVHLG-PVVAPCRVVYVVDEPDR Mb2649|M.bovis_AF2122/97 VMHWGMQRNAGLRVRASSETAIVSAVVLVGIA-FLRAPCRVVYVIDEPDV Rv2616|M.tuberculosis_H37Rv VMHWGMQRNAGLRVRASSETAVVSAVVLVGIA-FLRAPCRVVYVIDEPDV MMAR_2085|M.marinum_M VMHWGMQRGAGLAVRATSDTVAVSTVAVIQMMGVLRAPCRVVYVIDEPDI MUL_3259|M.ulcerans_Agy99 VMHWGMQRGAGLAVWATSDTVAVSTVAVIQMMGVSRAPCRVVYVIDEPDI MAV_3495|M.avium_104 VLHWGMQRGSGLRVQASSEVAVVDAVVVVRLG-FVPAPCRVVYVVDEPDI MAB_2902|M.abscessus_ATCC_1997 LMRFGIQHGIGLRVLTSAPEVGEGVNVATRLW-PFWALCRIVYVVDEPNR :::*: :. ** * ::: . .. . : * **:***:** : Mflv_3841|M.gilvum_PYR-GCK RGFAYGTLPGHAEAGEELFLVRYDPSTDLVHAEVRAFSRHATWWSRLGAP Mvan_2554|M.vanbaalenii_PYR-1 RGFAYGTLPGHAESGEELFLVRYDPSAGDVVAEVAAFSRHATWWSRLGAP Mb2649|M.bovis_AF2122/97 RGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPATWASKAAGP Rv2616|M.tuberculosis_H37Rv RGFGYGTLPGHPVSGEERFAVRCDPMTSVVFAEVLSFSRPATWASKAAGP MMAR_2085|M.marinum_M RGFAYGTLPGHPECGEERFAIRYDPDTSGVFAEVSSFSRPATWWSKAGGP MUL_3259|M.ulcerans_Agy99 RGFAYGTLPGHPECGEERFAIRYDPDTSGVFVEVSSFSRPATWWSKAGGP MAV_3495|M.avium_104 RGFGYGTLPGHPESGEERFVVRHDPATSAVYAEVTAFSRPATWWARAGGP MAB_2902|M.abscessus_ATCC_1997 RGFAYGTLQGHPETGEEAFIVRRDPSNDVVSVEITAFSRPSFWWIRLGNP ***.**** **. *** * :* ** . * .*: :*** : * : . * Mflv_3841|M.gilvum_PYR-GCK LTSAIQRAVTDRYLRAL--------------------------------- Mvan_2554|M.vanbaalenii_PYR-1 VTSLMQRVVTDRYLRAL--------------------------------- Mb2649|M.bovis_AF2122/97 LGAVTQRFIAQRYLRAV--------------------------------- Rv2616|M.tuberculosis_H37Rv LGAVTQRFIAQRYLRAV--------------------------------- MMAR_2085|M.marinum_M FVALTQRIIAKRYLRGV--------------------------------- MUL_3259|M.ulcerans_Agy99 FVALTQRIIAKRYLRGVWAASAEPATTRGHAHRANSSRAPEHICSITSPA MAV_3495|M.avium_104 VLRVGQRVIARRYLRAV--------------------------------- MAB_2902|M.abscessus_ATCC_1997 LAKQLQRIVTQRYLRAL--------------------------------- . ** :: ****.: Mflv_3841|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2554|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2649|M.bovis_AF2122/97 -------------------------------------------------- Rv2616|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2085|M.marinum_M -------------------------------------------------- MUL_3259|M.ulcerans_Agy99 GAPSGIIPTPWPASTGATRRSSAALAAASSARASASAASAVSLPFQRATK MAV_3495|M.avium_104 -------------------------------------------------- MAB_2902|M.abscessus_ATCC_1997 -------------------------------------------------- Mflv_3841|M.gilvum_PYR-GCK ---------- Mvan_2554|M.vanbaalenii_PYR-1 ---------- Mb2649|M.bovis_AF2122/97 ---------- Rv2616|M.tuberculosis_H37Rv ---------- MMAR_2085|M.marinum_M ---------- MUL_3259|M.ulcerans_Agy99 SLVNTRDGNR MAV_3495|M.avium_104 ---------- MAB_2902|M.abscessus_ATCC_1997 ----------