For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TRDVSRTGYKRVLLKLGGEMFGGGAVGLDPDVVHRVARQIAEVVRTGAEVAVVIGGGNFFRGAQLQQRGM ERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYIPLRARRHLEKGRVVIFGAGMGLP YFSTDTTAAQRALEIGAEVVLMAKAVDGIFTDDPRANPDAEFLPEITHREVIDRGLQVADATAFSLCMDN RMPILVFNLLTEGNIARAVAGEKIGTLVTP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3188c | - | - | 100% (241) | uridylate kinase PyrH |
M. abscessus ATCC 19977 | MAB_0343 | - | 5e-08 | 27.14% (199) | aspartate kinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2907c | pyrH | 1e-114 | 87.55% (233) | uridylate kinase |
M. gilvum PYR-GCK | Mflv_4124 | pyrH | 1e-116 | 90.64% (235) | uridylate kinase |
M. tuberculosis H37Rv | Rv2883c | pyrH | 1e-114 | 87.55% (233) | uridylate kinase |
M. leprae Br4923 | MLBr_01591 | pyrH | 1e-115 | 88.89% (234) | uridylate kinase |
M. marinum M | MMAR_1826 | pyrH | 1e-115 | 90.48% (231) | uridylate kinase PyrH |
M. avium 104 | MAV_3733 | pyrH | 1e-113 | 90.35% (228) | uridylate kinase |
M. smegmatis MC2 155 | MSMEG_2540 | pyrH | 1e-117 | 91.77% (231) | uridylate kinase |
M. thermoresistible (build 8) | TH_0271 | pyrH | 1e-109 | 88.64% (220) | PROBABLE URIDYLATE KINASE PYRH (UK) (URIDINE MONOPHOSPHATE |
M. ulcerans Agy99 | MUL_2074 | pyrH | 1e-115 | 90.48% (231) | uridylate kinase PyrH |
M. vanbaalenii PYR-1 | Mvan_2220 | pyrH | 1e-114 | 88.89% (234) | uridylate kinase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4124|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2220|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2540|M.smegmatis_MC2_155 -------------------------------------------------- TH_0271|M.thermoresistible__bu -------------------------------------------------- MAB_3188c|M.abscessus_ATCC_199 -------------------------------------------------- Mb2907c|M.bovis_AF2122/97 -------------------------------------------------- Rv2883c|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_1826|M.marinum_M -------------------------------------------------- MUL_2074|M.ulcerans_Agy99 MSGPGPPFQQACLVPSGAPRLGSTARARWRIPGAPAVQTSLRRCPRPDTG MLBr_01591|M.leprae_Br4923 -------------------------------------------------- MAV_3733|M.avium_104 -------------------------------------------------- Mflv_4124|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2220|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2540|M.smegmatis_MC2_155 -------------------------------------------------- TH_0271|M.thermoresistible__bu -------------------------------------------------- MAB_3188c|M.abscessus_ATCC_199 -------------------------------------------------- Mb2907c|M.bovis_AF2122/97 -----------------------------------------MTEP---DV Rv2883c|M.tuberculosis_H37Rv -----------------------------------------MTEP---DV MMAR_1826|M.marinum_M -----------------------------------------MTES---DV MUL_2074|M.ulcerans_Agy99 HAFGAVGYERTPRLPRSSAMRQDMRGRSGWLPGWHSHARRFMTES---DV MLBr_01591|M.leprae_Br4923 -----------------------------------------MTESWESQV MAV_3733|M.avium_104 -------------------------------------------------- Mflv_4124|M.gilvum_PYR-GCK --MADP----VTDQTPESRR-----------------AYTRVLLKLGGEM Mvan_2220|M.vanbaalenii_PYR-1 --MADPTAEPVAGQSSLIRP-----------------AYSRVLLKLGGEM MSMEG_2540|M.smegmatis_MC2_155 --MADSN---VAGRAAPIRP-----------------LYTRVLLKLGGEM TH_0271|M.thermoresistible__bu -------------------------------------------------M MAB_3188c|M.abscessus_ATCC_199 ------------MTRDVSRT-----------------GYKRVLLKLGGEM Mb2907c|M.bovis_AF2122/97 AGAPASKPEPASTGAASAAQ-----------LSG----YSRVLLKLGGEM Rv2883c|M.tuberculosis_H37Rv AGAPASKPEPASTGAASAAQ-----------LSG----YSRVLLKLGGEM MMAR_1826|M.marinum_M AGGAAPKPEPASANGVPAAP-----------VSGSVSQYKRVLLKLGGEM MUL_2074|M.ulcerans_Agy99 AGGAAPKPEPASANGVPAAP-----------VSGSVSQYKRVLLKLGGEM MLBr_01591|M.leprae_Br4923 AGSAVPKPQLMSANGVSAAAAGRGERLNHAGNPGHRSKYSRVLLKLGGEM MAV_3733|M.avium_104 -----------------------------------------MLLKLGGEM * Mflv_4124|M.gilvum_PYR-GCK FGGGQVGLDPDVVALVARQIAEVVRSGAQVAVVIGGGNFFRGAQLQQRGM Mvan_2220|M.vanbaalenii_PYR-1 FGGGQVGLDPDVVAQVARQIAEVVRSGAQVAVVIGGGNFFRGAQLQQRGM MSMEG_2540|M.smegmatis_MC2_155 FGGGQVGLDPDVVAQVARQIAEVVRSGAQVAVVIGGGNFFRGAQLQQRGM TH_0271|M.thermoresistible__bu FGGGQVGLDPDVVQKVAHEIAEVVRSGVQVAVVIGGGNFFRGAQLQQRGL MAB_3188c|M.abscessus_ATCC_199 FGGGAVGLDPDVVHRVARQIAEVVRTGAEVAVVIGGGNFFRGAQLQQRGM Mb2907c|M.bovis_AF2122/97 FGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGM Rv2883c|M.tuberculosis_H37Rv FGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGM MMAR_1826|M.marinum_M FGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGM MUL_2074|M.ulcerans_Agy99 FGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGM MLBr_01591|M.leprae_Br4923 FGGGQVGLDLDVVAQVARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGM MAV_3733|M.avium_104 FGGGQVGLDPDVVAQVARQIAEVVRGGVQVAVVIGGGNFFRGAQLQQRGM **** **** *** **::**:*** *.::***************** *: Mflv_4124|M.gilvum_PYR-GCK ERTRSDYMGMLGTVMNSLALQDFLQKEGIDTRVQTAITMGQVAEPYIPLR Mvan_2220|M.vanbaalenii_PYR-1 DRARSDYMGMLGTVMNSLALQDFLQKEGIDTRVQTAITMGQVAEPYIPLR MSMEG_2540|M.smegmatis_MC2_155 ERTRSDYMGMLGTVMNSLALQDFLQKEGIDTRVQTAITMGQVAEPYIPLR TH_0271|M.thermoresistible__bu ERSRSDYMGMLGTVMNSLALQDFLQKEGIDTRVQTAITMGQVAEPYIPLR MAB_3188c|M.abscessus_ATCC_199 ERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYIPLR Mb2907c|M.bovis_AF2122/97 ERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLR Rv2883c|M.tuberculosis_H37Rv ERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLR MMAR_1826|M.marinum_M ERTRSDYMGMLGTVMNSLALQDFLEKEGIATRVQTAITMGQVAEPYLPLR MUL_2074|M.ulcerans_Agy99 ERTRSDYMGMLGTVMNSLALQDFLEKEGIATRVQTAITMGQVAEPYLPLR MLBr_01591|M.leprae_Br4923 ERTRSDYMGMLGTVMNSLALQDFLEKEGIATRVQTAITMGQVAEPYLPLR MAV_3733|M.avium_104 ERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLR :*:*********************:**** ****************:*** Mflv_4124|M.gilvum_PYR-GCK AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGIY Mvan_2220|M.vanbaalenii_PYR-1 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF MSMEG_2540|M.smegmatis_MC2_155 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVF TH_0271|M.thermoresistible__bu AQRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVY MAB_3188c|M.abscessus_ATCC_199 ARRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGIF Mb2907c|M.bovis_AF2122/97 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF Rv2883c|M.tuberculosis_H37Rv AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF MMAR_1826|M.marinum_M AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF MUL_2074|M.ulcerans_Agy99 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF MLBr_01591|M.leprae_Br4923 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVF MAV_3733|M.avium_104 AVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGAEVVLMAKAVDGVF * ***********************************:**********:: Mflv_4124|M.gilvum_PYR-GCK TDDPRLNPAAEMLTAISHREVIDRGLKVADATAFSLCMDNGMPILVFNLL Mvan_2220|M.vanbaalenii_PYR-1 TADPRVDPDAELLIAISHREVIDRGLKVADATAFSLCMDNGMPILVFNLL MSMEG_2540|M.smegmatis_MC2_155 TDDPRTNPDAELITAISHREVIDRGLKVADATAFSLCMDNGMPILVFNLL TH_0271|M.thermoresistible__bu TDDPRTNPDAKLITKITHREVIDRGLRVADATAFSLCMDNGMPILVFNLL MAB_3188c|M.abscessus_ATCC_199 TDDPRANPDAEFLPEITHREVIDRGLQVADATAFSLCMDNRMPILVFNLL Mb2907c|M.bovis_AF2122/97 AEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLL Rv2883c|M.tuberculosis_H37Rv AEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLL MMAR_1826|M.marinum_M AEDPRVNPHAELLAVISHREVIDRGLRVADATAFSLCMDNGMPILVFNLL MUL_2074|M.ulcerans_Agy99 AEDPRVNPHAELLAVISHREVIDRGLRVADATAFSLCMDNGMPILVFNLL MLBr_01591|M.leprae_Br4923 VEDPRVNPEAELLTAISHREVIDRGLRVADATAFSLCMDNGMPILVFNLL MAV_3733|M.avium_104 SADPRQYPEAELITAISHREVIDRGLRVADATAFSLCMDNGMPILVFNLL *** * *::: ::****:****:************* ********* Mflv_4124|M.gilvum_PYR-GCK TDGNIARAVAGERIGTLVTT Mvan_2220|M.vanbaalenii_PYR-1 VDGNIARAVAGEKIGTLVTT MSMEG_2540|M.smegmatis_MC2_155 TSGNIARAVAGEKIGTLVTT TH_0271|M.thermoresistible__bu IDGNIARAVAGEKIGTLVTT MAB_3188c|M.abscessus_ATCC_199 TEGNIARAVAGEKIGTLVTP Mb2907c|M.bovis_AF2122/97 TDGNIARAVRGEKIGTLVTT Rv2883c|M.tuberculosis_H37Rv TDGNIARAVRGEKIGTLVTT MMAR_1826|M.marinum_M TNGNIARAVAGEKIGTLVTT MUL_2074|M.ulcerans_Agy99 TNGNIARAVAGEKIGTLVTT MLBr_01591|M.leprae_Br4923 TNGNIARAVAGEKIGTLVTT MAV_3733|M.avium_104 TNGNIARAVAGEKIGTLVTT .******* **:******.