For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDLPNRIYSEFPGISTRAWEHPADRAALQTLRSLKGFDSILKALAALLRGTPAPADVSGDRDPGRRPSV QHVEQHPPRLCPHSGRSGDP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2954 | - | - | 100% (90) | hypothetical protein MAB_2954 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1977 | - | 3e-12 | 60.00% (50) | hypothetical protein Rv1977 |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_2906 | - | 3e-12 | 62.00% (50) | hypothetical protein MMAR_2906 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3476 | - | 4e-12 | 71.79% (39) | peptidase, M48 family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv1977|M.tuberculosis_H37Rv MSQTPATT---RKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSG MMAR_2906|M.marinum_M MSQTPATT---RTAFGGISSRAWEHPADRTALSALRRLKGFDQILKLLSG MSMEG_3476|M.smegmatis_MC2_155 MTRPPATQPPQRTTFPGISSRAWEHPADRTALTALRRLKGFDQVLKVLSG MAB_2954|M.abscessus_ATCC_1997 MSDLPNRI---YSEFPGISTRAWEHPADRAALQTLRSLKGFDSILKALAA *: * . * **:*********:** :** *****.:** ::. Rv1977|M.tuberculosis_H37Rv MLRERQHRLLYLASAARVGPRQFADLDALLDECVDVLDASAKPELYVMQS MMAR_2906|M.marinum_M MLRERQHRLLYLASAARVGPRQFADLDALLDECVDVLDAPTKPEVYVTQS MSMEG_3476|M.smegmatis_MC2_155 MLRERQHRLLYLASSARVGPRQFADLDELLDDCARVLDAPSRPEMFVTQS MAB_2954|M.abscessus_ATCC_1997 LLRGTP------APADVSGDR----------------DPGRRPSVQHVEQ :** *.: * * *. :*.: :. Rv1977|M.tuberculosis_H37Rv PIADAFTIGMGKPFTVITSGLYDLVTHDEMRFVMGHELGHALSGHAVYRT MMAR_2906|M.marinum_M PMVNAYTIGMDAPFIVITSGLYDLMTHDELRFVVGHELGHALSGHATYRT MSMEG_3476|M.smegmatis_MC2_155 PVANAYTIGMDEPFIVITSGMYDLMSHDEMRFVIGHELGHALSGHAVYRT MAB_2954|M.abscessus_ATCC_1997 -------------------------------------------------- Rv1977|M.tuberculosis_H37Rv MMMHLLRLARSFGVLPVGGWALRAIVAALLEWQRKSELSGDRAGLLCAQD MMAR_2906|M.marinum_M MLMHLMRLAGSLGFLPIGGWALRAIVAALLEWQRKSELSGDRAGLLCCQD MSMEG_3476|M.smegmatis_MC2_155 MLMHLMRIASTFGFVPIGGWALRAIVAALMEWERKSELSGDRAGLLCGQD MAB_2954|M.abscessus_ATCC_1997 ---HPPRLCP------------------------HSGRSGDP-------- * *:. :* *** Rv1977|M.tuberculosis_H37Rv LDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVLKLLNLEL MMAR_2906|M.marinum_M LDTAIRVEMKLAGGSRLDKLDSEAFLAQAAEYERSGDMRDGLLKLLNLEL MSMEG_3476|M.smegmatis_MC2_155 LDTAIRVELKLAAGARLDKLDSQAFLAQAREYERAGDMRDGLLKLLNLEL MAB_2954|M.abscessus_ATCC_1997 -------------------------------------------------- Rv1977|M.tuberculosis_H37Rv QTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAAR MMAR_2906|M.marinum_M QTHPFSVLRVAELTKWVDAGGYGKVMSGSYPLRLDDGQSSIADDLGEAAR MSMEG_3476|M.smegmatis_MC2_155 KTHPFSVLRAAALTQWVDTGGYGAVMAGDYPRREDDDKAALRDDIGEAAR MAB_2954|M.abscessus_ATCC_1997 -------------------------------------------------- Rv1977|M.tuberculosis_H37Rv YYRDGFDQSNDPLIKGIRDGFGGIVEGVGRAASNAADSLGRKITEWRQPS MMAR_2906|M.marinum_M HYKDGFDQSDDPLIKGIRDGLGGIVDGVGRAATSAADSLGRKINEWRHNP MSMEG_3476|M.smegmatis_MC2_155 HYRDGFDQSDDPLIRGIRDGLGGIVDGVGQAATSAADSVGRKISEWRRSA MAB_2954|M.abscessus_ATCC_1997 -------------------------------------------------- Rv1977|M.tuberculosis_H37Rv K---------------------- MMAR_2906|M.marinum_M K---------------------- MSMEG_3476|M.smegmatis_MC2_155 QRDARRDDRRDGPEPDSGSDDAG MAB_2954|M.abscessus_ATCC_1997 -----------------------