For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VASPTHDLRVSGSSILDELTWRGLIAQTTDRDALAADIAKGPISVYGGFDPTAASLHAGHLVPLLTLSRF QRAGHRPIVLAGGATGLIGDPRDTSERNLHGTDVVAEWADRIRGQLERFVEFNDTPTGAIVANNLEWTGQ LTALEFLRDLGKHFSVNVMLDRDTIRRRLEGDGISYTEFSYMLLQANDYVQLHRKYGCSLQIGGSDQWGN IVAGVRLARQQDGASVHALTVPLVTAADGTKFGKSTGGGNLWLDPEMTSPYAWYQYFINTADADVVRYLR WFTFLSAEEIGELETATTERAHERAAQRRLAAEVTTLVHGESATLAVEHASGALFGRGDLDRLDEGTLTA ALTEAGNGEPARIADGEPDTIVDLLVSSGLSESKGAARRTVKEGGVYVNNTRVDAEDWTPGDGDYLTGGW LVLRRGKRNIAGVQRLR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2354 | - | - | 100% (437) | tyrosyl-tRNA synthetase (TyrS) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1715 | tyrS | 0.0 | 76.30% (422) | tyrosyl-tRNA synthetase |
M. gilvum PYR-GCK | Mflv_3513 | - | 0.0 | 74.94% (427) | tyrosyl-tRNA synthetase |
M. tuberculosis H37Rv | Rv1689 | tyrS | 0.0 | 76.30% (422) | tyrosyl-tRNA synthetase |
M. leprae Br4923 | MLBr_01352 | tyrS | 0.0 | 72.60% (427) | tyrosyl-tRNA synthetase |
M. marinum M | MMAR_2488 | tyrS | 0.0 | 76.81% (427) | tyrosyl-tRNA synthase, TyrS |
M. avium 104 | MAV_3082 | tyrS | 0.0 | 75.94% (424) | tyrosyl-tRNA synthetase |
M. smegmatis MC2 155 | MSMEG_3758 | tyrS | 0.0 | 75.82% (426) | tyrosyl-tRNA synthetase |
M. thermoresistible (build 8) | TH_1553 | tyrS | 1e-153 | 77.81% (338) | Probable Tyrosyl-tRNA synthase tyrS (TYRRS) |
M. ulcerans Agy99 | MUL_1668 | tyrS | 0.0 | 77.05% (427) | tyrosyl-tRNA synthetase |
M. vanbaalenii PYR-1 | Mvan_3294 | - | 0.0 | 75.76% (425) | tyrosyl-tRNA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1715|M.bovis_AF2122/97 ------MSG------MILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAG Rv1689|M.tuberculosis_H37Rv ------MSG------MILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAG MMAR_2488|M.marinum_M ------MSSNSSGSAGILDELGWRGLIAQSTDLDALAADVQRPPLTVYAG MUL_1668|M.ulcerans_Agy99 ------MSSNSSGSAGILDELGWRGLIAQSTDLDALAADAQRPPLTVYAG MAV_3082|M.avium_104 ------MSS------GILDELGWRGLIAQSTDLDALAAEAR--PMTVYAG MLBr_01352|M.leprae_Br4923 ------MSS------SILNELGWRGLVAQSTDLDALADELRRGPMTVYAG Mflv_3513|M.gilvum_PYR-GCK ------MSTP-----DILDDLEWRGLIAQSTDREALGEMLAAGPATVYSG Mvan_3294|M.vanbaalenii_PYR-1 ------MGT------SILDELEWRGLIAQSTDRDALAEALAEGPVTVYSG MSMEG_3758|M.smegmatis_MC2_155 MIVPVTSSAT-----GILDELDWRGLIAQSTDREALASDLAKGPMTVYSG TH_1553|M.thermoresistible__bu -------------------------------------------------- MAB_2354|M.abscessus_ATCC_1997 --MASPTHDLRVSGSSILDELTWRGLIAQTTDRDALAADIAKGPISVYGG Mb1715|M.bovis_AF2122/97 FDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVGERS Rv1689|M.tuberculosis_H37Rv FDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVGERS MMAR_2488|M.marinum_M FDPTAASLHAGHLVPLLALRRFQRAGHRPIVLAGGATGMIGDPRDIGERS MUL_1668|M.ulcerans_Agy99 FDPTAASLHAGHLVPLLALRRFQRAGHRPIVLAGGATGMIGDPRDIGERS MAV_3082|M.avium_104 FDPTAPSLHAGHLVPLLALRRFQRAGHRPIVLAGGATGMIGDPRDVGERT MLBr_01352|M.leprae_Br4923 FDPTAPSLHVGHLVPLLVLRRFQRAGHRPIVLAGGATGMIGDPRDIGERT Mflv_3513|M.gilvum_PYR-GCK FDPTAPSLHAGHLIPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDVGERT Mvan_3294|M.vanbaalenii_PYR-1 FDPTAPSLHAGHLIPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDVGERT MSMEG_3758|M.smegmatis_MC2_155 FDPTAPSLHAGHLVPLLTLRRFQQAGHRPIVLAGGATGMIGDPRDTGERT TH_1553|M.thermoresistible__bu ---------------------------------------------VX--T MAB_2354|M.abscessus_ATCC_1997 FDPTAASLHAGHLVPLLTLSRFQRAGHRPIVLAGGATGLIGDPRDTSERN . Mb1715|M.bovis_AF2122/97 LNEADTVAEWTERIRGQLERFVDFDDSP---MGAIVENNLEWTGSLSAIE Rv1689|M.tuberculosis_H37Rv LNEADTVAEWTERIRGQLERFVDFDDSP---MGAIVENNLEWTGSLSAIE MMAR_2488|M.marinum_M LNDADTVANWTERIRGQLERFVDFDGSP---TGAIVENNLEWTAAMSTVE MUL_1668|M.ulcerans_Agy99 LNDADTVANWTERIRGQLERFVDFDGSP---TGAIVENNLEWTAAMSTVE MAV_3082|M.avium_104 LNEADTVAEWTERIRGQLERFVDFDESA---TGAVVVNNLDWTRQLSAIE MLBr_01352|M.leprae_Br4923 LNEAYTVAEWAERIRGQLERFVEFDDVAKSRNGAIVVNNLEWTSPMSAIE Mflv_3513|M.gilvum_PYR-GCK LNTADTVADWADRIRGQLERFVEFDDSE---TGAIVADNLTWTSELSAIE Mvan_3294|M.vanbaalenii_PYR-1 LNTADTVADWAGRIRGQLERFVEFDDSP---TGAVVANNLSWTGELSAIE MSMEG_3758|M.smegmatis_MC2_155 MNTEDTVADWADRIRGQLERFVEFDDSP---TGAIVENNLTWTGELSAIS TH_1553|M.thermoresistible__bu LQSADVVADWADRIKGQLERFVEFTDGP---TGAIVENNLTWTGGLTAIE MAB_2354|M.abscessus_ATCC_1997 LHGTDVVAEWADRIRGQLERFVEFNDTP---TGAIVANNLEWTGQLTALE :: .**:*: **:*******:* **:* :** ** ::::. Mb1715|M.bovis_AF2122/97 FLRDIGKHFSVNVMLARDTIRRRLAGEGISYTEFSYLLLQANDYVELHRR Rv1689|M.tuberculosis_H37Rv FLRDIGKHFSVNVMLARDTIRRRLAGEGISYTEFSYLLLQANDYVELHRR MMAR_2488|M.marinum_M FLRDVGKHFSVNVMLDRDTIRRRLEGEGISYTEFSYMLLQANDYVELHRR MUL_1668|M.ulcerans_Agy99 FLRDVGKHFSVNVMLDRDTIRRRLEGEGISYTEFSYMLLQANDYVELHRR MAV_3082|M.avium_104 FLRDLGKHFSVNVMLDRDTVRRRLEGDGISYTEFSYMLLQANDYVELHRR MLBr_01352|M.leprae_Br4923 FLRDVGKHFSINLMLDRDTIRRRLNGQGISYTEFSYMLLQANDYAELHQR Mflv_3513|M.gilvum_PYR-GCK FLRDVGKHFSVNVMLDRDTVRRRLEGDGISYTEFSYMLLQANDYVELHQR Mvan_3294|M.vanbaalenii_PYR-1 FLRDVGKHFSVNVMLDRDTVRRRLEGEGISYTEFSYMLLQANDYVELHQR MSMEG_3758|M.smegmatis_MC2_155 FLRDIGKYFSVNVMLDRETVRRRLEGDGISYTEFSYMLLQANDYVELHQR TH_1553|M.thermoresistible__bu FLRDIGKHFSVNVMLDRDTVRRRLEGEGISYTEFSYMLLQANDYVELYQR MAB_2354|M.abscessus_ATCC_1997 FLRDLGKHFSVNVMLDRDTIRRRLEGDGISYTEFSYMLLQANDYVQLHRK ****:**:**:*:** *:*:**** *:*********:*******.:*::: Mb1715|M.bovis_AF2122/97 HGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS Rv1689|M.tuberculosis_H37Rv HGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS MMAR_2488|M.marinum_M HGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKFGKS MUL_1668|M.ulcerans_Agy99 HGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKFGKS MAV_3082|M.avium_104 YGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS MLBr_01352|M.leprae_Br4923 HGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKS Mflv_3513|M.gilvum_PYR-GCK YGCTLQVGGSDQWGNIIAGVRLVRQKAGAAVHAMTTPLVTDSEGKKFGKS Mvan_3294|M.vanbaalenii_PYR-1 YGCTLQVGGSDQWGNIIAGVRLVRQKAGASVHALTTPLVTDSEGKKFGKS MSMEG_3758|M.smegmatis_MC2_155 HGCALQVGGSDQWGNIVAGVRLVRQKIGATVHAMTTPLVTDSEGKKFGKS TH_1553|M.thermoresistible__bu YGCRLQIGGSDQWGNIVAGVRLVRQKLSATVHGLTVPLVTAADGTKFGKS MAB_2354|M.abscessus_ATCC_1997 YGCSLQIGGSDQWGNIVAGVRLARQQDGASVHALTVPLVTAADGTKFGKS :** **:**:******:*****.**: .*:**.:*.**** ::* *:*** Mb1715|M.bovis_AF2122/97 TGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQ Rv1689|M.tuberculosis_H37Rv TGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQ MMAR_2488|M.marinum_M TGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQ MUL_1668|M.ulcerans_Agy99 TGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQ MAV_3082|M.avium_104 TGGGSLWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELER MLBr_01352|M.leprae_Br4923 TGGGSLWLDPEMTSPYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQ Mflv_3513|M.gilvum_PYR-GCK TGGGSLWLDPEMTSPYAWYQYFINTADADVVPYLRWFTFLTAEELAELEL Mvan_3294|M.vanbaalenii_PYR-1 TGGGSLWLDPEMTSPYAWYQYFINTADADVLPYLRWFTFLSADELVELEQ MSMEG_3758|M.smegmatis_MC2_155 TGGGNLWLDPEMTSPYAWYQYFVNTADADVLGYLRWFTFLTPDELAELAD TH_1553|M.thermoresistible__bu TGGGNLWLDPDMTSPYTWYQYFINTADADVIRYLRWFTFLSAEELAELQE MAB_2354|M.abscessus_ATCC_1997 TGGGNLWLDPEMTSPYAWYQYFINTADADVVRYLRWFTFLSAEEIGELET ****.***** :*:**:*****.**:****: ******** .:*: ** Mb1715|M.bovis_AF2122/97 ATAQRPQQRAAQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDE Rv1689|M.tuberculosis_H37Rv ATAQRPQQRAAQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDE MMAR_2488|M.marinum_M ATAERPHQRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDE MUL_1668|M.ulcerans_Agy99 ATAERAHQRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDE MAV_3082|M.avium_104 ATAERPQQRAAQRRLARELTVLVHGEAATEAVEHASRALFGQGELERLDA MLBr_01352|M.leprae_Br4923 TTVSRPQERAAQRRLATELTVLVHGAAATQAVEHASRALFGQGELARLDE Mflv_3513|M.gilvum_PYR-GCK ATAERPHERAAQRRLARELTNLVHGEAATAAVELASQALFGRGELADLDE Mvan_3294|M.vanbaalenii_PYR-1 ATTERPHERAAQRRLARELTNLVHGEAATAAVELASQALFGRAELGELDE MSMEG_3758|M.smegmatis_MC2_155 ATENRPHERAAQRRLARELTTLVHGEGATKSVEYASRALFGRGELADLDE TH_1553|M.thermoresistible__bu ATEQRPHERAAQRRLARELTTLVHGQQATESAEHASRALFGRGELDRLDE MAB_2354|M.abscessus_ATCC_1997 ATTERAHERAAQRRLAAEVTTLVHGESATLAVEHASGALFGRGDLDRLDE :* .*.::******** *:* **** ** :.* ** ****:.:* ** Mb1715|M.bovis_AF2122/97 ATLAAALRETT---VAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGG Rv1689|M.tuberculosis_H37Rv ATLAAALRETT---VAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGG MMAR_2488|M.marinum_M ATLGAALRETS---IAELEPGTPDGIVDLLVATGLSASKGAARRTIGEGG MUL_1668|M.ulcerans_Agy99 ATLGAALRETS---IAELEPGTPDGIVDLLVATGLSASKGAARRTIGEGG MAV_3082|M.avium_104 ATLAAALRETS---VAELKPGAPDGIVDLLVASGLSESRKAARRTLGEGG MLBr_01352|M.leprae_Br4923 ATLATALRETV---VAELKPGNPDGIVDLLVASGLSPSRGAARRTIDEGG Mflv_3513|M.gilvum_PYR-GCK NTLAGAVREAA---VAQLDPGGPDSIVDLLVATGLSASKGAARRTVAEGG Mvan_3294|M.vanbaalenii_PYR-1 PTLAAALREAS---VAQLAPGGPDSIIDLLVASGLSASKGAARRTVAEGG MSMEG_3758|M.smegmatis_MC2_155 STLSAALREAGNGQVAELAPGGPDSIVDLLVATGLSNSKGAARRTVAEGG TH_1553|M.thermoresistible__bu PTLAAALQEAS---VADLEPGAPDSIVDLLVASGLVQSRGAARRTVAEGG MAB_2354|M.abscessus_ATCC_1997 GTLTAALTEAGNGEPARIADGEPDTIVDLLVSSGLSESKGAARRTVKEGG ** *: *: * : * ** *:****::** *: *****: *** Mb1715|M.bovis_AF2122/97 VSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVERIG------ Rv1689|M.tuberculosis_H37Rv VSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVERIG------ MMAR_2488|M.marinum_M VSVNNIRVETDEWVPQTSDFLHGRWLVLRRGKRNIAGVERVG------ MUL_1668|M.ulcerans_Agy99 VSVNNIRVETDEWVPQTSDFLHGRWLVLRRGKRNIAGVERVG------ MAV_3082|M.avium_104 VSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIAGVEKL------- MLBr_01352|M.leprae_Br4923 VLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRNIAGIERV------- Mflv_3513|M.gilvum_PYR-GCK VYVNNAKVTADDWVPQPSDFLHGRWLVLRRGKRNIAGVERVG------ Mvan_3294|M.vanbaalenii_PYR-1 AYVNNVKIATDEWIPQASDFLHDRWLVLRRGKRNIAGIERVG------ MSMEG_3758|M.smegmatis_MC2_155 VYVNNARVESDEWVPQESDFLHEGWLVLRRGKRHIAGVRRVTASDQGK TH_1553|M.thermoresistible__bu AYVNNRRIEAEDWVPEPSDYLHGRWLVLRRGKRNIAGVRRVG------ MAB_2354|M.abscessus_ATCC_1997 VYVNNTRVDAEDWTPGDGDYLTGGWLVLRRGKRNIAGVQRLR------ . *** :: ::* * .*:* ********* ***:.::