For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TRSSADDACPGALRLHEAADGALARIRLPGGMLSSAQLAALAEAAGDHGAPILELTSRGNVQLRSVRDAN AVGALLSEAGLLPSPRHERVRNIVASPLSGRAGEFPDARPLVSALDRGLTAAATLAELPGRFLFSLDDGR GDMAAMGADIGLRHDQKGWRLLLGGRTTSVCDGDAVDAVERMLTAARKFVEIRGNAWRVAELPEGAGTLA RAIDAVFIDGPPDPTPAPRAPVGWIEQLRTGESPGELVTLGAAVPLGQLPARVAALLAAVEKPVIVTPWR SVLLCDLPHGDADAVLRVLAPLGLVFDERSPWLNASSCTGLPGCGRSRTDVHADVRLEVAEEIASGIHSP VHRHWVGCPRACGSPSTGQVLVATELGYRPLERHP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2200c | - | - | 100% (386) | cobalamin biosynthesis protein CobG |
M. abscessus ATCC 19977 | MAB_1662c | - | 4e-11 | 23.92% (393) | sulfite reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2090 | cobG | 1e-110 | 57.07% (375) | cobalamin biosynthesis protein CobG |
M. gilvum PYR-GCK | Mflv_3106 | - | 1e-103 | 54.94% (395) | precorrin-3B synthase |
M. tuberculosis H37Rv | Rv2064 | cobG | 1e-110 | 57.07% (375) | cobalamin biosynthesis protein CobG |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_3044 | - | 1e-105 | 55.06% (385) | cobalamin biosynthesis protein |
M. avium 104 | MAV_1787 | - | 3e-11 | 24.62% (390) | sulfite reductase |
M. smegmatis MC2 155 | MSMEG_3871 | cobG | 1e-105 | 54.83% (383) | precorrin-3B synthase |
M. thermoresistible (build 8) | TH_0438 | cobG | 1e-109 | 56.12% (392) | Possible cobalamin biosynthesis protein CobG |
M. ulcerans Agy99 | MUL_2288 | - | 1e-104 | 54.81% (385) | cobalamin biosynthesis protein |
M. vanbaalenii PYR-1 | Mvan_3429 | - | 1e-106 | 55.41% (388) | precorrin-3B synthase |
CLUSTAL 2.0.9 multiple sequence alignment Mb2090|M.bovis_AF2122/97 ------------------------------------------MAGTRDAD Rv2064|M.tuberculosis_H37Rv ------------------------------------------MAGTRDAD MMAR_3044|M.marinum_M ------------------------------------------MTRARDAD MUL_2288|M.ulcerans_Agy99 ------------------------------------------MTRARDAD MSMEG_3871|M.smegmatis_MC2_155 ------------------------------------------MTRTRDQD Mflv_3106|M.gilvum_PYR-GCK ------------------------------------------MVRAREKD Mvan_3429|M.vanbaalenii_PYR-1 ------------------------------------------MARARDDD TH_0438|M.thermoresistible__bu ------------------------------------------VERAREHD MAB_2200c|M.abscessus_ATCC_199 ------------------------------------------MTRSSADD MAV_1787|M.avium_104 MLAALAIFFRGERPMTTARPAKARNEGQWALGNREPLNPNEEMKQAGAPL : : Mb2090|M.bovis_AF2122/97 ACPGALRPHQAADG------------------------------------ Rv2064|M.tuberculosis_H37Rv ACPGALRPHQAADG------------------------------------ MMAR_3044|M.marinum_M ACPGALQVHQAADG------------------------------------ MUL_2288|M.ulcerans_Agy99 ACPGALQVHQAADG------------------------------------ MSMEG_3871|M.smegmatis_MC2_155 ACPGALTVHQAADG------------------------------------ Mflv_3106|M.gilvum_PYR-GCK ACPGALQTHRAADG------------------------------------ Mvan_3429|M.vanbaalenii_PYR-1 ACPGALQTHRAADG------------------------------------ TH_0438|M.thermoresistible__bu ACPGALSVHPAADG------------------------------------ MAB_2200c|M.abscessus_ATCC_199 ACPGALRLHEAADG------------------------------------ MAV_1787|M.avium_104 AVRERIETIYAKNGFDSIDKSDLRGRFRWWGLYTQREQGYDGSWTGDENI * : * :* Mb2090|M.bovis_AF2122/97 -------ALARIRLPGGMITAAQLATLASVASDFGSATLELTARGNVQLR Rv2064|M.tuberculosis_H37Rv -------ALARIRLPGGMITAAQLATLASVASDFGSATLELTARGNVQLR MMAR_3044|M.marinum_M -------ALVRVRLPGGRLTADQLAALARASNELASATLELTARGNLQLR MUL_2288|M.ulcerans_Agy99 -------ALVRVRLPGGRLTADQLAALARASNELASATLELTARGNLQLR MSMEG_3871|M.smegmatis_MC2_155 -------ALVRIRLAGGAITAAQLATLADVANDLGSPAMELTSRGNIQIR Mflv_3106|M.gilvum_PYR-GCK -------DLSRIRLPGGAITPPQLEVVAQAAIDLAASTLELTSRGNLQIR Mvan_3429|M.vanbaalenii_PYR-1 -------DLARIRLPGGAITARQLEAVAQAAVNFGTATLELTSRANLQIR TH_0438|M.thermoresistible__bu -------ALARIRLPGGMLTPAQLTALADAARRFGSEAMELTSRGNIQIR MAB_2200c|M.abscessus_ATCC_199 -------ALARIRLPGGMLSSAQLAALAEAAGDHGAPILELTSRGNVQLR MAV_1787|M.avium_104 EKLEARYFMMRVRCDGGAISAAALRTLGQISVDFARDTADITDRENIQYH : *:* ** ::. * .:. : . ::* * *:* : Mb2090|M.bovis_AF2122/97 --GIRDVAAVADAVAKAGLLPSATH-ERVRNIVASPLSGR-AGGLADVRA Rv2064|M.tuberculosis_H37Rv --GIRDVAAVADAVAKAGLLPSATH-ERVRNIVASPLSGR-AGGLADVRA MMAR_3044|M.marinum_M --AITDVMAVADAIANAGLLPSPTH-ERVRNIVASPLSGR-VGGLADVQS MUL_2288|M.ulcerans_Agy99 --AITDVMAVADAIANAGLLPSPTH-ERVRNIVASPLSGR-VGGLADLQS MSMEG_3871|M.smegmatis_MC2_155 --GLTDTDAAAAALAGAGLLPSPTH-ERVRNIVASPLTGR-SGGVADVGA Mflv_3106|M.gilvum_PYR-GCK --GVRDTAAVADLLAGAGLLPSATH-ERVRNIVASPLSGR-HGGLCDVRA Mvan_3429|M.vanbaalenii_PYR-1 --GIHDTGAVAALLTDAGLLPSATH-ERVRNIVASPLSGR-SGGFCDARD TH_0438|M.thermoresistible__bu --GISDPAAVADAVAAAGLLPSPTH-ETVRNIVASPLSGR-CGGATDIRP MAB_2200c|M.abscessus_ATCC_199 --SVRDANAVGALLSEAGLLPSPRH-ERVRNIVASPLSGR-AGEFPDARP MAV_1787|M.avium_104 WIEVENVPEIWRRLDAVGLRTTEACGDCPRVILGSPLAGESLEEVIDPSW : : : .** .: : * *:.***:*. * Mb2090|M.bovis_AF2122/97 WVGELDAAIRAEPRLAELGGRFWFGLD--DGRADVSGLGADVGVQVFPDG Rv2064|M.tuberculosis_H37Rv WVGELDAAIRAEPRLAELGGRFWFGLD--DGRADVSGLGADVGVQVFPDG MMAR_3044|M.marinum_M WVGELDAAICAEPLLAQLGGRFWFSID--DGRADVSGLGADVGVHVLADG MUL_2288|M.ulcerans_Agy99 WVGELDAAICAEPLLAQLGGRFWFSID--DGRADVSGLGADVGVHVLADG MSMEG_3871|M.smegmatis_MC2_155 LVSELDAAIQAEPELAGLPGRFLFGLD--DGRGDISGLGPDAGVHMLDAG Mflv_3106|M.gilvum_PYR-GCK LVADLDAAVQRDPVLAELPGRFLFGFD--DGRGDISGLGADAGVHALDDS Mvan_3429|M.vanbaalenii_PYR-1 LVRSLDHAVQQDPRLARLPGRFLFGID--DGRGDISGLGADAGIHVLDGH TH_0438|M.thermoresistible__bu WVTRLDHAIQSELALAALPGRFLFGID--DGRGDIAALAADVAVQTLGAS MAB_2200c|M.abscessus_ATCC_199 LVSALDRGLTAAATLAELPGRFLFSLD--DGRGDMAAMGADIGLRHDQKG MAV_1787|M.avium_104 AIAEIARRYIGQPEFADLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEHG : : :* * :: .:. :. .. . .:. Mb2090|M.bovis_AF2122/97 P---RLLLTGRDTGVRVA---DVAETLIEVALRFVKIR------------ Rv2064|M.tuberculosis_H37Rv P---RLLLTGRDTGVRVA---DVAETLIEVALRFVKIR------------ MMAR_3044|M.marinum_M C---AVLLDGRDTGVRLAPD-DVVPTLTELAVRFTQIR------------ MUL_2288|M.ulcerans_Agy99 C---AVLLDGRDTGVRLAPD-DVVPTLTELAVRFTQMR------------ MSMEG_3871|M.smegmatis_MC2_155 TG--ALLLGGCDTGVRIDRA-GVVPTLITVARRFAKVH------------ Mflv_3106|M.gilvum_PYR-GCK TA--ALLLAGRDTGVRVALS-SAVDELLAVARRFVDGR------------ Mvan_3429|M.vanbaalenii_PYR-1 TA--ALLLAGRDTGVRLPLG-HVVDELLSVAARFLQVR------------ TH_0438|M.thermoresistible__bu GDEAAVLLAGRDSGVRVAAG-DAVEVMVTVARRFTASR------------ MAB_2200c|M.abscessus_ATCC_199 WR---LLLGGRTTSVCDGDAVDAVERMLTAARKFVEIR------------ MAV_1787|M.avium_104 PGLDLWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVFRDYGYRRLR : * :. . : . : Mb2090|M.bovis_AF2122/97 --------ETAWRVTELAD-IGELQSGVEL----GPSVRPVT-KTPVGWI Rv2064|M.tuberculosis_H37Rv --------ETAWRVTELAD-IGELQSGVEL----GPSVRPVT-KTPVGWI MMAR_3044|M.marinum_M --------GNCWRVNELID-PSVLVPGAAP----GSRFPAVT-KAPVGWI MUL_2288|M.ulcerans_Agy99 --------GNFWRVNELID-PSVLVPGAAP----GSRFPAVT-KAPVGWI MSMEG_3871|M.smegmatis_MC2_155 --------GKAWRVGELDD-LAPLLEGLTATGAGGQRWAPTV-RPPVGWI Mflv_3106|M.gilvum_PYR-GCK --------GKHWRVGELDD-PAILLDGRAPTERPGGTWQART-RPPVGWI Mvan_3429|M.vanbaalenii_PYR-1 --------GTAWRVDELDD-PTTLLGDRTPTAEPGATWPAHS-RPPVGWI TH_0438|M.thermoresistible__bu --------GGAWRIAELDD-TSALLDGFARRAAPAPATPAP--RPPIGWI MAB_2200c|M.abscessus_ATCC_199 --------GNAWRVAELPEGAGTLARAIDAVFIDGPPDPTPAPRAPVGWI MAV_1787|M.avium_104 SKARLKFLVKDWGIEKFREVLETEYLKRPLIDGPAPEPVAHP-IDHVGVQ * : :: : . . :* Mb2090|M.bovis_AF2122/97 PQDDSR------VTLGAAVPLGVLPARVAECLAAIEAPLVITPWRSVLIC Rv2064|M.tuberculosis_H37Rv PQDDSR------VTLGAAVPLGVLPARVAECLAAIEAPLVITPWRSVLIC MMAR_3044|M.marinum_M PQRDGR------VTLGAAVPLGILPARVAEFLAAIEAPIAITPWRSVLVF MUL_2288|M.ulcerans_Agy99 PQRDGR------VTLGAAVPLGILPARVAEFLAAIEAPIAITPWRSVLVF MSMEG_3871|M.smegmatis_MC2_155 PQRDGR------VALGAGVPLGVLSARDAQFLAAIEAPIVITPWRSVLVF Mflv_3106|M.gilvum_PYR-GCK EQTDGR------IALGAAVPLGVLDAQVARYLAAVEAPLTVTPWRSVLIF Mvan_3429|M.vanbaalenii_PYR-1 EQDDGR------IALGAAVPLGVLDAQVARYLAAVEAPLAVTPWRSVLLF TH_0438|M.thermoresistible__bu PQDDGR------VTLAAGVPLGVLTARLAEFLAAIDAPLIVTPWRSVLVC MAB_2200c|M.abscessus_ATCC_199 EQLRTGESPGELVTLGAAVPLGQLPARVAALLAAVEKPVIVTPWRSVLLC MAV_1787|M.avium_104 RLKNGLNAVG-VAPIAGRVSGTILLAVADLAQQAGCDRIRFTPYQKLVLL .:.. *. * * * : .**::.::: Mb2090|M.bovis_AF2122/97 DLDDATADAALRVLAPLGLVFDENSPWLNISACTGSPGCAHSAADVRADA Rv2064|M.tuberculosis_H37Rv DLDDATADAALRVLAPLGLVFDENSPWLNISACTGSPGCAHSAADVRADA MMAR_3044|M.marinum_M DLDEAIADTALRVLAPLGLVFDENSPWLNVSACTGSPGCASSAADVRADA MUL_2288|M.ulcerans_Agy99 DLDEAIADTALRVLAPLGLVFDENSPWLNVSACTGSPGCASSAADVRADA MSMEG_3871|M.smegmatis_MC2_155 DLDEGVADTALRVLAPMGLVFDENSPWLDVSACTGSPGCAKSLTDVRADA Mflv_3106|M.gilvum_PYR-GCK DLDEGVADVALRVLAPLGLIFDEDSAWLSVSACTGSPGCAHSAADVRADA Mvan_3429|M.vanbaalenii_PYR-1 DLDEGVADVALRVLAPLGLVFDENSPWLSVSACTGSPGCERSVADVRADA TH_0438|M.thermoresistible__bu DLDEGVADTAVRVLAPLGLIFDENSPWLRISSCTGLPGCARSAADVRADA MAB_2200c|M.abscessus_ATCC_199 DLPHGDADAVLRVLAPLGLVFDERSPWLNASSCTGLPGCGRSRTDVHADV MAV_1787|M.avium_104 DIPDDKLDEVVAGLEALGLQSQPSHWRRNLMACSGIEFCKLSFAETRVRA *: . * .: * .:** : :*:* * * ::.:. . Mb2090|M.bovis_AF2122/97 ARSLNVESAG------------HRHFVGCERACGSPPAGEV-----LVAT Rv2064|M.tuberculosis_H37Rv ARSLNVESAG------------HRHFVGCERACGSPPAGEV-----LVAT MMAR_3044|M.marinum_M ALSVRTEAAASGV---------HRHFVGCERACGSPLAGEV-----LVAT MUL_2288|M.ulcerans_Agy99 ALSVRTEAAASGV---------HRHFVGCERACGSPLAGEV-----LVAT MSMEG_3871|M.smegmatis_MC2_155 AAAAQEPSAN------------HRHFVGCERACGSPPVGDV-----LVAT Mflv_3106|M.gilvum_PYR-GCK GAAVDPSIAV------------HRHFVGCDRACGSPADAQV-----LVAT Mvan_3429|M.vanbaalenii_PYR-1 AAAVDDPVTV------------HRHFVGCERACGSPADGEV-----LVAT TH_0438|M.thermoresistible__bu ARAATEAAPXGQTR-------VHRHFVGCERACGTPPGAQV-----LVAT MAB_2200c|M.abscessus_ATCC_199 RLEVAEEIASGIHSP------VHRHWVGCPRACGSPSTGQV-----LVAT MAV_1787|M.avium_104 QGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGLKGQMVDD : ** .:*. .:: :* Mb2090|M.bovis_AF2122/97 GGG--------------------YRRLRP--------------------- Rv2064|M.tuberculosis_H37Rv GGG--------------------YRRLRP--------------------- MMAR_3044|M.marinum_M AQG--------------------YRLLRKA-------------------- MUL_2288|M.ulcerans_Agy99 AQG--------------------YRLLRKA-------------------- MSMEG_3871|M.smegmatis_MC2_155 EDG--------------------YRLRIASP------------------- Mflv_3106|M.gilvum_PYR-GCK GDG--------------------YRSREAHP------------------- Mvan_3429|M.vanbaalenii_PYR-1 GDG--------------------YRARKRHP------------------- TH_0438|M.thermoresistible__bu GEG--------------------YRLRNPHP------------------- MAB_2200c|M.abscessus_ATCC_199 ELG--------------------YRPLERHP------------------- MAV_1787|M.avium_104 GEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIERVARNFLK * * Mb2090|M.bovis_AF2122/97 --------------------- Rv2064|M.tuberculosis_H37Rv --------------------- MMAR_3044|M.marinum_M --------------------- MUL_2288|M.ulcerans_Agy99 --------------------- MSMEG_3871|M.smegmatis_MC2_155 --------------------- Mflv_3106|M.gilvum_PYR-GCK --------------------- Mvan_3429|M.vanbaalenii_PYR-1 --------------------- TH_0438|M.thermoresistible__bu --------------------- MAB_2200c|M.abscessus_ATCC_199 --------------------- MAV_1787|M.avium_104 YRGEGERFAQWAMRADEDDLR