For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MESAAVLIAAPGVGSDRGTDANPRPRYSIVLSSDPAEIEAAQRLRYQAFADEMGAPLPHAVRGPLTGEMI DLDKLDPFCDHLLARDEDTGAIIGCCRLLPPQGYQAAGETFTDSMFDATALDPLRPKLVEIGRVTVAPEH RNGAVMGILWAGIFRYQQMTEHQYAIGCLSVRMEDGGPRGSLVRSVHDFAQRFAAPEEYRVIPRQPVVVD GVPLEDIPPQEKAKIPPLLHGCLRIGGRICGPPSFDPEFDMADFLVLVTKDTARQRYLERLERSLALG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1936 | - | - | 100% (278) | hypothetical protein MAB_1936 |
M. abscessus ATCC 19977 | MAB_3359c | - | 4e-62 | 45.68% (278) | hypothetical protein MAB_3359c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3053c | - | 1e-56 | 48.13% (241) | hypothetical protein Mb3053c |
M. gilvum PYR-GCK | Mflv_4257 | - | 6e-64 | 46.26% (281) | hypothetical protein Mflv_4257 |
M. tuberculosis H37Rv | Rv3027c | - | 1e-56 | 48.13% (241) | hypothetical protein Rv3027c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_1686 | - | 1e-63 | 48.20% (278) | hypothetical protein MMAR_1686 |
M. avium 104 | MAV_3874 | - | 2e-67 | 48.54% (274) | hypothetical protein MAV_3874 |
M. smegmatis MC2 155 | MSMEG_2355 | - | 2e-59 | 45.55% (281) | hypothetical protein MSMEG_2355 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1924 | - | 8e-63 | 47.84% (278) | hypothetical protein MUL_1924 |
M. vanbaalenii PYR-1 | Mvan_2103 | - | 1e-64 | 46.91% (275) | hypothetical protein Mvan_2103 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3053c|M.bovis_AF2122/97 -----------------------------------------MVEAAQRLR Rv3027c|M.tuberculosis_H37Rv -----------------------------------------MVEAAQRLR MMAR_1686|M.marinum_M -----MSIASVLIPSDKPRGPAT-DAGAGPRYSLLLSTDSALIEAAQRLR MUL_1924|M.ulcerans_Agy99 -----MSIASVLIPSDKPRGPAT-DAGAGPCYSLLLSTDSALIEAAQRLR MAV_3874|M.avium_104 -----MSIASVLIPSDHPSGPAT-GSSAAPRYSLLLSADPAMIEAAQRLR MSMEG_2355|M.smegmatis_MC2_155 MLVMSMRAASVLIAADEATSR---PDRGAKRYTLLLTTDPDLIDAAQRLR Mvan_2103|M.vanbaalenii_PYR-1 -----MSTASVLIAPDDIDHAQGGSSPSAPRYTLLLCTDVDSIEAAQRLR Mflv_4257|M.gilvum_PYR-GCK -----MNASSVLIPSDHSVTAG-----SVPRYSMLLCTDPASIEAAQRLR MAB_1936|M.abscessus_ATCC_1997 -----MESAAVLIAAPGVGSDRGTDANPRPRYSIVLSSDPAEIEAAQRLR ::****** Mb3053c|M.bovis_AF2122/97 YDVFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGELVG Rv3027c|M.tuberculosis_H37Rv YDVFSTTPGFALP------AAADTRRDGDRFDEYCDHLLVRDDDTGELVG MMAR_1686|M.marinum_M YDVFAATPGFALP------AADD-RRDVDRFDEYCDHLLVRDDDTGELVG MUL_1924|M.ulcerans_Agy99 YDVFAATPGFALP------AADD-RRDVDRFDEYCDHLLVRDDDTGELVG MAV_3874|M.avium_104 YEVFTSTPGFALP------SADGSGRDVDRFDEFCDHLLVRDDDTGELVG MSMEG_2355|M.smegmatis_MC2_155 HDVFTSEPGYALA-------GSTDGRDADRFDEYCDHLLVRDERSGELVG Mvan_2103|M.vanbaalenii_PYR-1 HDVFSTEPGFTLTD-----DGGSGGLDADRFDEYCDHLLVRDDATGELVG Mflv_4257|M.gilvum_PYR-GCK YDVFTSEPGYTLNRGTLHRSAAPDGLDADRFDEFCDHLLVRDDDTGQLVG MAB_1936|M.abscessus_ATCC_1997 YQAFADEMGAPLPHAVRG-PLTGEMIDLDKLDPFCDHLLARDEDTGAIIG ::.*: * .* * *::* :*****.**: :* ::* Mb3053c|M.bovis_AF2122/97 CYRMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHRNGG Rv3027c|M.tuberculosis_H37Rv CYRMLAPAGAIAAGGLYTATEFDVCAFDPLRPSLVEMGRAVVREGHRNGG MMAR_1686|M.marinum_M CYRMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHRNGA MUL_1924|M.ulcerans_Agy99 CYRMLPPAGAIAAGGLYTATEFDVGAFDPLRPSLVEMGRAAVRDGHRNGA MAV_3874|M.avium_104 CYRMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHRNGG MSMEG_2355|M.smegmatis_MC2_155 CYRMLPPPGAIAAGGLYTATEFDVTALDVLRPSLVEMGRAVVRQDHRNGA Mvan_2103|M.vanbaalenii_PYR-1 CYRMLPPPGAIAAGGLYTATEFDVTALDPLRPSLVEMGRAVVRDGHRNGA Mflv_4257|M.gilvum_PYR-GCK CYRMLPPPGAIAAGGLYTATEFDISALDALRPSLVEMGRAVVRDGHRNGA MAB_1936|M.abscessus_ATCC_1997 CCRLLPPQGYQAAGETFTDSMFDATALDPLRPKLVEIGRVTVAPEHRNGA * *:*.* * *** :* : ** *:* ***.***:**..* ****. Mb3053c|M.bovis_AF2122/97 VVLLMWAGILAYLDRYGYDYVTGCVSVPI----GGDGETP-GSRLRGVRD Rv3027c|M.tuberculosis_H37Rv VVLLMWAGILAYLDRYGYDYVTGCVSVPI----GGDGETP-GSRLRGVRD MMAR_1686|M.marinum_M VVLLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRGVRD MUL_1924|M.ulcerans_Agy99 VVLLMWAGILAYLDRCDYDYVTGCVSVPIVEPTGRDGITP-GRELRGVRD MAV_3874|M.avium_104 VVLLMWAGILAYLDRYGYDYVTGCVSVPIG---DADDAPP-GSRLRGVRD MSMEG_2355|M.smegmatis_MC2_155 VVLLMWAGILAYLDHAGYDHVTGCVSVPVA---GAAGEAP-GAQIRGVRD Mvan_2103|M.vanbaalenii_PYR-1 VVLLMWAGILAYLDHSGYDYVAGCVSVPVA---DPEGRSPAGSQLRGVRD Mflv_4257|M.gilvum_PYR-GCK VVLLMWTGILAYLDRSGYDYVTGCVSVPVA---DPDGLTPPGSRLRGVRD MAB_1936|M.abscessus_ATCC_1997 VMGILWAGIFRYQQMTEHQYAIGCLSVRME-----DGGPR-GSLVRSVHD *: ::*:**: * : :::. **:** : . . * :*.*:* Mb3053c|M.bovis_AF2122/97 FILNRHAAPPQCQVYPYRPVRVDGRSLDDILPPPRPAVPPLMRGYLRLGA Rv3027c|M.tuberculosis_H37Rv FILNRHAAPPQCQVYPYRPVRVDGRSLDDILPPPRPAVPPLMRGYLRLGA MMAR_1686|M.marinum_M FVLRRHPAS--YRVDPYRPVRIDGKSLDDIAPPPRPAIPPLLRGYLRLGA MUL_1924|M.ulcerans_Agy99 FVLRRHPAS--YRVDPYRPVRIDGKSLDDIAPPPRPAIPPLLRGYLRLGA MAV_3874|M.avium_104 FVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGA MSMEG_2355|M.smegmatis_MC2_155 FVRRRHAAP--YTVHPYRPVVLDGRTLDDIAPPERVTVPALMRGYLRLGA Mvan_2103|M.vanbaalenii_PYR-1 FVIRRHAAPAEYTVRPYRPVVVDGRPLDEIEPPARLSVPALMRGYLRLGA Mflv_4257|M.gilvum_PYR-GCK LVRRRNAAPPEYTVRPYRPVVIDGHHLDDIAAPPRVKVPALLRGYLRLGA MAB_1936|M.abscessus_ATCC_1997 FA-QRFAAPEEYRVIPRQPVVVDGVPLEDIPPQEKAKIPPLLHGCLRIGG : * *. * * :** :** *::* . : :*.*::* **:*. Mb3053c|M.bovis_AF2122/97 RACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDAR-- Rv3027c|M.tuberculosis_H37Rv RACGEPAHDPDFGVGDFCLLLDKDHADTRYLRRLRSVAAASEMVNDAR-- MMAR_1686|M.marinum_M QACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGELAGG MUL_1924|M.ulcerans_Agy99 QACGEPAHDPDFGVGDFCVLLGKRDADIRYLKRLRSVSAAAEMAGELAGG MAV_3874|M.avium_104 QVCGEPAHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR--- MSMEG_2355|M.smegmatis_MC2_155 QVCGEPAHDPVFGVGDFPALLDKRQADVRYLRRLRSA-SAAAHMTDGAA- Mvan_2103|M.vanbaalenii_PYR-1 QVCGEPAHDPDFGVGDFPALLAKRHADTRYLRRLRSVGMATAAVADGTRS Mflv_4257|M.gilvum_PYR-GCK QVCGEPAHDPDFGVGDFPALLDKRRADVRYLTRLRSAAAAAADVTR---- MAB_1936|M.abscessus_ATCC_1997 RICGPPSFDPEFDMADFLVLVTKDTARQRYLERLERSLALG--------- : ** *:.** *.:.** *: * * *** **. Mb3053c|M.bovis_AF2122/97 -- Rv3027c|M.tuberculosis_H37Rv -- MMAR_1686|M.marinum_M AA MUL_1924|M.ulcerans_Agy99 AA MAV_3874|M.avium_104 -- MSMEG_2355|M.smegmatis_MC2_155 -- Mvan_2103|M.vanbaalenii_PYR-1 -- Mflv_4257|M.gilvum_PYR-GCK -- MAB_1936|M.abscessus_ATCC_1997 --