For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKFTSAVLSGVVGAGAVASALAFAGAADAAPSKCTAAEFARTHSTVSSQVASYLDKNPTINDGITNAAKG APEGQRREAIKTYLDGQPAAKAELEKIRQPLTSLKNSCGADTDDAAPAAPAGLMGQAPAAEQPAVENAPA EQPQQPWNPFAPQQPAPETATANTPQAAPNVAAVVDQQDV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_1925 | - | - | 100% (180) | hypothetical protein MAB_1925 |
| M. abscessus ATCC 19977 | MAB_1922 | - | 3e-16 | 37.00% (100) | hypothetical protein MAB_1922 |
| M. abscessus ATCC 19977 | MAB_4528c | - | 4e-14 | 31.25% (176) | hypothetical protein MAB_4528c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0209 | - | 3e-08 | 30.10% (103) | hypothetical protein Mb0209 |
| M. gilvum PYR-GCK | Mflv_0462 | - | 1e-15 | 39.67% (121) | hypothetical protein Mflv_0462 |
| M. tuberculosis H37Rv | Rv0203 | - | 3e-08 | 30.10% (103) | hypothetical protein Rv0203 |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_2554 | - | 6e-15 | 39.13% (115) | hypothetical protein MMAR_2554 |
| M. avium 104 | MAV_4971 | - | 6e-13 | 29.17% (168) | hypothetical protein MAV_4971 |
| M. smegmatis MC2 155 | MSMEG_0243 | - | 1e-15 | 41.28% (109) | hypothetical protein MSMEG_0243 |
| M. thermoresistible (build 8) | TH_3768 | - | 1e-15 | 38.79% (116) | PUTATIVE conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_3206 | - | 4e-15 | 39.13% (115) | hypothetical protein MUL_3206 |
| M. vanbaalenii PYR-1 | Mvan_0189 | - | 8e-15 | 33.59% (131) | Fis family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_0243|M.smegmatis_MC2_155 -----------MVAGAAGAGAVAGAMLFGAIPSALADPAP----NPPNCT
TH_3768|M.thermoresistible__bu -MVLSARTVRRAVAGTIGAGAIAGATLFSSIPFAFADPEP----EPPGCT
Mflv_0462|M.gilvum_PYR-GCK -MLNSAPMVRRAVAGVLGAGAVSGAVLFGVLGAAPASAQPVPQNDPPNCT
MMAR_2554|M.marinum_M -MSLSAP----AVHRGIAVGAFSAALLFG--SAAIAVADP-----PANCT
MUL_3206|M.ulcerans_Agy99 -MSLSAP----AVHRRIAVGAFSAALLFG--SAAIAVADP-----PANCT
MAB_1925|M.abscessus_ATCC_1997 -----MKFTSAVLSGVVGAGAVASALAFAG----AADAAP------SKCT
Mb0209|M.bovis_AF2122/97 MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDP--------CA
Rv0203|M.tuberculosis_H37Rv MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDP--------CA
MAV_4971|M.avium_104 MTSASAGRRRRIFAGLIAAALPGAAVAVLAGPPATGANDP--------CA
Mvan_0189|M.vanbaalenii_PYR-1 ---------MHLLEKFALAAAGAAGAVMLTATPAGAAPDP--------CA
. . ... . . * *:
MSMEG_0243|M.smegmatis_MC2_155 AADLAGVASGVSAGTSAYLFTHPQVNDFFT-SLEGLPREEVKPKVADYLA
TH_3768|M.thermoresistible__bu AADLAGVAAGVSAATSAYLFTHPEVNDFFT-GLEGQHRADVRDTVAEYLD
Mflv_0462|M.gilvum_PYR-GCK AADFAGVASGVSAATSAYLFTHPEVNTFFS-NLHGAPRAQIDAEVAEYLA
MMAR_2554|M.marinum_M AADLARTASGVSNATADYLFNHPDVNDFFT-GLRGQDRDAMSANTQNYLD
MUL_3206|M.ulcerans_Agy99 AADLARTASGVSNATADYLFNHPDVNDFFT-GLRGQDRDAMSANTQNYLD
MAB_1925|M.abscessus_ATCC_1997 AAEFARTHSTVSSQVASYLDKNPTINDGITNAAKGAPEGQRREAIKTYLD
Mb0209|M.bovis_AF2122/97 ASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFE
Rv0203|M.tuberculosis_H37Rv ASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFE
MAV_4971|M.avium_104 ASEVARTIGSVSKSMGDYLDAHPETNQAMTSMLQQQAGPQSVNGLKSYFD
Mvan_0189|M.vanbaalenii_PYR-1 ASEVARTVAEVATYTGNYLEANPEANRAITTISQQQGGPQSVAALKTYFD
*::.* . . *: . ** :* * :: . ::
MSMEG_0243|M.smegmatis_MC2_155 ANPQVKDELTAVRQPLVDLKNRCG--TAPAPELP----------------
TH_3768|M.thermoresistible__bu ANPQVKAELTHIRQPLVDIKNRCGGPDLATDDIP----------------
Mflv_0462|M.gilvum_PYR-GCK SHPQVEAELKGVRQPLADIKHRCG-FTPTDPDGPDF--------------
MMAR_2554|M.marinum_M ANPSVKADLQGIRQPLVDFKGRCQ--------------------------
MUL_3206|M.ulcerans_Agy99 ANPSVKADLQGIRQPLVDFKGRCQ--------------------------
MAB_1925|M.abscessus_ATCC_1997 GQPAAKAELEKIRQPLTSLKNSCGADTDDAAPAAPAGLMGQAPAAEQPAV
Mb0209|M.bovis_AF2122/97 ANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR------
Rv0203|M.tuberculosis_H37Rv ANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR------
MAV_4971|M.avium_104 ANPKVAGDMTSIAQPLTSLSLQCKLPISIPQALGMVQQAQGAAGGLPALP
Mvan_0189|M.vanbaalenii_PYR-1 ANPKVAADLQRLQQPLAALSGKCKLPLTLPQVFGLMQAAQQVPA-LPAAQ
.:* . :: : ***. :. *
MSMEG_0243|M.smegmatis_MC2_155 ---------------------------------------------
TH_3768|M.thermoresistible__bu ---------------------------------------------
Mflv_0462|M.gilvum_PYR-GCK ---------------------------------------------
MMAR_2554|M.marinum_M ---------------------------------------------
MUL_3206|M.ulcerans_Agy99 ---------------------------------------------
MAB_1925|M.abscessus_ATCC_1997 ENAPAEQPQQPWNPFAPQQPAPETATANTPQAAPNVAAVVDQQDV
Mb0209|M.bovis_AF2122/97 ---------------------------------------------
Rv0203|M.tuberculosis_H37Rv ---------------------------------------------
MAV_4971|M.avium_104 GNPAGASPLGGAAGPAGTPPAVPQPAGPLSGPPRGNTVG------
Mvan_0189|M.vanbaalenii_PYR-1 NVGVTATR-------------------------------------