For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDALVDGLRSFNRTVTQRIGVLESEYLARDRPLGQSRVLWEIGDSGCDIRELRARLGLDSGYLSRLLRAL EGAGLIEVTAADGDTRVRTARLTAAGRAELAELDRRSDDLAHSILEPLSVNQRQRLADAMAEVERLFVAS QVQIAVMDTRTPEARYCIRAYFEEISARFEDGFDPALTLPAGDAELCAPAGLFLVAALHEEPVGCAGLKL PPHTDTAEIKRVWIAPHVRGLGLGKRILAELERLAVDHGAHTIRLDTNRALTEAIAMYRSAGYDEVAAFN QEKYAHFWFQKQLS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1138c | - | - | 100% (295) | MarR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0157 | - | 4e-06 | 27.27% (132) | putative transcriptional regulator MarR |
M. abscessus ATCC 19977 | MAB_0925c | - | 3e-05 | 32.69% (104) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0960 | - | 2e-08 | 41.86% (86) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | MLBr_00378 | - | 2e-07 | 31.30% (115) | putative acetyltransferase |
M. marinum M | MMAR_0700 | - | 2e-05 | 33.68% (95) | hypothetical protein MMAR_0700 |
M. avium 104 | MAV_4763 | - | 2e-05 | 32.65% (98) | acetyltransferase, gnat family protein |
M. smegmatis MC2 155 | MSMEG_0469 | - | 7e-61 | 45.36% (291) | transcriptional regulatory protein PadR- |
M. thermoresistible (build 8) | TH_2302 | - | 1e-08 | 38.30% (94) | acetyltransferase |
M. ulcerans Agy99 | MUL_2823 | - | 1e-05 | 33.68% (95) | hypothetical protein MUL_2823 |
M. vanbaalenii PYR-1 | Mvan_0695 | - | 3e-07 | 35.48% (93) | GCN5-related N-acetyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment TH_2302|M.thermoresistible__bu -------------------------------------------------- Mvan_0695|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_0700|M.marinum_M -------------------------------------------------- MUL_2823|M.ulcerans_Agy99 -------------------------------------------------- MAV_4763|M.avium_104 -------------------------------------------------- MAB_1138c|M.abscessus_ATCC_199 ---------MTDALVDGLRSFN----RTVTQRIGVLESEYLA-------- MSMEG_0469|M.smegmatis_MC2_155 ---------MS--VTSVLRRFN----RTYTQRIGVLDESYLG-------- Mflv_0960|M.gilvum_PYR-GCK -------------------------------------------------- MLBr_00378|M.leprae_Br4923 MSIVLAIDTATAAVTAGIVAFDGHDCFTLAERVTVDAKAHVERLTPNVLV TH_2302|M.thermoresistible__bu --------------------------------------------VSTVEQ Mvan_0695|M.vanbaalenii_PYR-1 -----------------------MTTPRGKLRRARPTLDSVVMSVQTVGE MMAR_0700|M.marinum_M --------------------------------------MPEATQPTGAVE MUL_2823|M.ulcerans_Agy99 --------------------------------------MPEATQPTGAVE MAV_4763|M.avium_104 --------------------------------------MTPESSPPADGR MAB_1138c|M.abscessus_ATCC_199 --RDRPLGQSRVLWEIGDSG-CDIRELRARLGLDSGYLSRLLRALEGAGL MSMEG_0469|M.smegmatis_MC2_155 --TGRPLNVSRVLFEIGGLGAVTIRDLRDRLGLDSGYVTRILTRLENEGL Mflv_0960|M.gilvum_PYR-GCK ---------------------------------------MRMARLRLDEQ MLBr_00378|M.leprae_Br4923 ALADAELAMCELDAVVVGCGPGPFTGLRVGMATAAAYGHALGIPVHGVCS TH_2302|M.thermoresistible__bu LSFQAVGRH----------------------------------------- Mvan_0695|M.vanbaalenii_PYR-1 LRFVAVGQD----------------------------------------- MMAR_0700|M.marinum_M LRFVPVALG----------------------------------------- MUL_2823|M.ulcerans_Agy99 LRFVPVALG----------------------------------------- MAV_4763|M.avium_104 LRFVPATHD----------------------------------------- MAB_1138c|M.abscessus_ATCC_199 IEVTAADGDTRVRTARLT-------------------------------- MSMEG_0469|M.smegmatis_MC2_155 VRVVPDPADGRRRIVELT-------------------------------- Mflv_0960|M.gilvum_PYR-GCK LCFALYSAS----------------------------------------- MLBr_00378|M.leprae_Br4923 LDAIGVRTTGDTLVVTDARRHEVYWARYRDGVRIAGPAVGSPTDVDPGTA : TH_2302|M.thermoresistible__bu -----------------HRLAEPLLAELAVEYAHRYDSTVDRVARWLRSA Mvan_0695|M.vanbaalenii_PYR-1 -----------------DPLAAPLIDELAVEYADRYGGSRDKVHAWLRGY MMAR_0700|M.marinum_M -----------------DPLAQPLLTELAAEYAQRYGVEQPAVLAWLQDG MUL_2823|M.ulcerans_Agy99 -----------------DPLAQPLLTELAAEYAQRYGVEQPAVLAWLQDG MAV_4763|M.avium_104 -----------------DPLARPLLAELAVEYAQRYGGTPSAHLSWLPVP MAB_1138c|M.abscessus_ATCC_199 ---AAGRAELAELDRRSDDLAHSILEPLSVNQRQRLADAMAEVERLFVAS MSMEG_0469|M.smegmatis_MC2_155 ---DAGREAVNELEDRSESRAADLVAPLTARQRERLADALATAELLVRAA Mflv_0960|M.gilvum_PYR-GCK --------------RAVTSAYRPLLEELGLTYPQYLVLLVLWEEEPCTVG MLBr_00378|M.leprae_Br4923 LTVAGSPEHAALFGLPLCEPIYPTPAGLVAAVPDWSVSPIPLVALYLRRP * . TH_2302|M.thermoresistible__bu PAAEFEPP------------------------------------------ Mvan_0695|M.vanbaalenii_PYR-1 PAAEFEAP------------------------------------------ MMAR_0700|M.marinum_M AALEFAPP------------------------------------------ MUL_2823|M.ulcerans_Agy99 AALEFAPP------------------------------------------ MAV_4763|M.avium_104 RD-ELAPP------------------------------------------ MAB_1138c|M.abscessus_ATCC_199 QVQIAVMDTRTPEARYCIRAYFEEISARFEDGFDPALTLPAGDAE--LCA MSMEG_0469|M.smegmatis_MC2_155 TVRLVEVDQDSDVARTALTHYYDELNRRFPQGFDPG--APSGP------E Mflv_0960|M.gilvum_PYR-GCK HLGERLHL------------------------------------------ MLBr_00378|M.leprae_Br4923 DAKPITADNEPIVIGTLTPADVDRCAQLESQFFDGDNPWPAAAFDRELAN TH_2302|M.thermoresistible__bu -DGALVIGLLSGQPVTGGAFRRFDAHT----AELKRIWTDSRHRRRGHAR Mvan_0695|M.vanbaalenii_PYR-1 -GGGLLIGLLDGQPVTGGAFRRFDDTT----AELKRIWTDARYRRRGLGQ MMAR_0700|M.marinum_M -DGGMLIGLRDGRPVTGGAFCRHDPDT----AELKRIWTHREHRRRGHAR MUL_2823|M.ulcerans_Agy99 -DGGMLIGLRDGRPVTGGAFCRHDPDT----AELKRIWTHREHRRRGHAR MAV_4763|M.avium_104 -DGGLLIGVVDGVPVTGGAFRRYDAET----AELKRIWTDAAHRRRGYAR MAB_1138c|M.abscessus_ATCC_199 PAGLFLVAALHEEPVGCAGLKLPPHTD---TAEIKRVWIAPHVRGLGLGK MSMEG_0469|M.smegmatis_MC2_155 HGAHYIAAISDGQPVGFGGIRPLESGDDGPVAEVKRMWVDDRWRGAGLGS Mflv_0960|M.gilvum_PYR-GCK -DSGTLSPLLKR--LEGAGLVQRQRSA----TDERRVTATLTPAGRALEE MLBr_00378|M.leprae_Br4923 SYNCYVGARTADTLVGYAGITRLGHTPP-FEYEVHTIAVDPAYRGRGVGR : : ..: : : : . TH_2302|M.thermoresistible__bu ALLAELERRITARGYRRIYLTTGDRQPEAEALYRAAGYSRLP-KPLPGDE Mvan_0695|M.vanbaalenii_PYR-1 ALVSRLEADIAARGYSRIYLTTGDRQPEAEALYSSLGYQRLE-EPLPAEG MMAR_0700|M.marinum_M ALLARLEGEIAARGYRKVYLVTGNRQPEAEELYRACGYTRLP-APQPSEG MUL_2823|M.ulcerans_Agy99 ALLARLEGEIAARGYRKVYLVTGNRQPEAEELYRACGYTRLP-APQPSEG MAV_4763|M.avium_104 ALLAALEERTRACGYRRLYLITGNRQPEAEALYDATGYTRVPPDPLPDWG MAB_1138c|M.abscessus_ATCC_199 RILAELERLAVDHGAHTIRLDTNRALTEAIAMYRSAGYDEVA---AFNQE MSMEG_0469|M.smegmatis_MC2_155 RILRHLETLAAEHGFARVRLDTNGNLGEAIALYERTGYAQID---RYNDN Mflv_0960|M.gilvum_PYR-GCK RAACIPERMLGSTGAAAEDLAALR---DALHLITEELHTRSS-------- MLBr_00378|M.leprae_Br4923 RLLGELLDFAGSG---AIYLEVRTDNETAIALYRSVGFERIGLRPRYYPA * . * : . . TH_2302|M.thermoresistible__bu EGYPVAFLKELGGPGS Mvan_0695|M.vanbaalenii_PYR-1 EVYAIAFLKELH---- MMAR_0700|M.marinum_M PVLPIAFGKALP---- MUL_2823|M.ulcerans_Agy99 PVLPIAFGKALP---- MAV_4763|M.avium_104 PFRPIAFEKWLVPNER MAB_1138c|M.abscessus_ATCC_199 KYAHFWFQKQLS---- MSMEG_0469|M.smegmatis_MC2_155 PYAQFFFEKRL----- Mflv_0960|M.gilvum_PYR-GCK ---------------- MLBr_00378|M.leprae_Br4923 SGADAYLMRREAQ---