For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SALGLDHQLCFALYSASRAMTAVYRPILTELNLTYPQYLVLLALWEEDRATVSRLGERLRLDSGTLSPLL KRLETNGLIRRERSASDERLVEVTLTPAGRHLERKAQCIPEKLALATGIAEREATDLRDAVCQLTDALQA SLRKESA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0925c | - | - | 100% (148) | MarR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_1029c | - | 2e-25 | 39.86% (148) | MarR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3329c | - | 7e-08 | 37.50% (96) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2911 | - | 7e-07 | 25.96% (104) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_0960 | - | 1e-46 | 65.47% (139) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2887 | - | 7e-07 | 25.96% (104) | transcriptional regulatory protein |
| M. leprae Br4923 | MLBr_02696 | - | 5e-07 | 30.53% (95) | putative MarR-family regulatory protein |
| M. marinum M | MMAR_0145 | - | 4e-26 | 42.18% (147) | transcriptional regulator |
| M. avium 104 | MAV_0057 | - | 5e-07 | 31.25% (96) | transcriptional regulator, MarR family protein |
| M. smegmatis MC2 155 | MSMEG_0538 | - | 2e-27 | 42.86% (147) | regulatory protein, MarR |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_4952 | - | 3e-26 | 42.18% (147) | transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_1524 | - | 3e-46 | 64.75% (139) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_0925c|M.abscessus_ATCC_199 --------------------------------------------------
Mvan_1524|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_0960|M.gilvum_PYR-GCK --------------------------------------------------
MMAR_0145|M.marinum_M --------------------------------------------------
MUL_4952|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_0538|M.smegmatis_MC2_155 --------------------------------------------------
Mb2911|M.bovis_AF2122/97 --------------------------------------------------
Rv2887|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP
MAV_0057|M.avium_104 --------------------------------------------------
MAB_0925c|M.abscessus_ATCC_199 ----------------------------------MSALGLDHQLCFALYS
Mvan_1524|M.vanbaalenii_PYR-1 ----------------------------------MAPLSLDEHLCFALYS
Mflv_0960|M.gilvum_PYR-GCK --------------------------------MRMARLRLDEQLCFALYS
MMAR_0145|M.marinum_M --------------------------MAAPTTPQADPLALEQQVCFALAI
MUL_4952|M.ulcerans_Agy99 --------------------------MAAPTTPQADPLALEQQVCFALAI
MSMEG_0538|M.smegmatis_MC2_155 --------------------------MASPSSVDVDPLALERQVCFALAV
Mb2911|M.bovis_AF2122/97 -------------------------------MGLADDAPLGYLLYRVG--
Rv2887|M.tuberculosis_H37Rv -------------------------------MGLADDAPLGYLLYRVG--
MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK
MAV_0057|M.avium_104 --------------------------MADSESNAAEVAELAEGLHRALSK
* : .
MAB_0925c|M.abscessus_ATCC_199 ASRAMTAVYRPILTELNLTYPQYLVLLALWEE--------DRATVSRLGE
Mvan_1524|M.vanbaalenii_PYR-1 ASRAMTAAYRPLLTELGITYPQYLVLLVLGEE--------GDISVGRLGE
Mflv_0960|M.gilvum_PYR-GCK ASRAVTSAYRPLLEELGLTYPQYLVLLVLWEE--------EPCTVGHLGE
MMAR_0145|M.marinum_M TNRAVLAVYRPLLEPLGLTHPQYLVMLALWDNQRTSSGQGSALAVKQIAA
MUL_4952|M.ulcerans_Agy99 TNRAVLAVYRPLLEPLGLTHPQYLVMLALWDNQRTSSGQGSALAVKQIAA
MSMEG_0538|M.smegmatis_MC2_155 TNRAVLSIYRPLLEPLGLTHPQYLVMLALWDHHKIRSAGVDPLSVKQIAA
Mb2911|M.bovis_AF2122/97 --AVLRPEVSAALSPLGLTLPEFVCLRMLSQS--------PGLSSAELAR
Rv2887|M.tuberculosis_H37Rv --AVLRPEVSAALSPLGLTLPEFVCLRMLSQS--------PGLSSAELAR
MLBr_02696|M.leprae_Br4923 LFSILRRRTPNGAVSGELTLAQLSILVTLLDQ--------GPIRMTDLAA
MAV_0057|M.avium_104 LFAMLRRGDPSGAAAGDLTLAQLSILVTLLDQ--------GPIRMTDLAA
: :* .: : * : :.
MAB_0925c|M.abscessus_ATCC_199 RLRLDSGTLSPLLKRLETNGLIRRERSASDERLVEVTLTPAGRHLERKAQ
Mvan_1524|M.vanbaalenii_PYR-1 RLQLDSGTLSPLLKRMEAGGIVRRQRSETDERQVEVALTTEGKRLRRKVH
Mflv_0960|M.gilvum_PYR-GCK RLHLDSGTLSPLLKRLEGAGLVQRQRSATDERRVTATLTPAGRALEERAA
MMAR_0145|M.marinum_M TLQLDSATLSPMLKRLEALGLVTRTRNATDERSTDVKLTRFGIALRERAA
MUL_4952|M.ulcerans_Agy99 TLQLDSATLSPMLKRLEALGLVTRTRNATDERSTDVKLTRFGIALRERAA
MSMEG_0538|M.smegmatis_MC2_155 TLQLDSATLSPMLKRLEALGLITRTRSVGDERATDIRLTEAGIALRERAL
Mb2911|M.bovis_AF2122/97 HASVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAE
Rv2887|M.tuberculosis_H37Rv HASVTPQAMNTVLRKLEDAGAVARPASVSSGRSLPATLTARGRALAKRAE
MLBr_02696|M.leprae_Br4923 HERVRTPTTTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESL
MAV_0057|M.avium_104 HERVRTPTTTVAIRRLEKVGLVKRSRDPSDLRAVLVDITPRGRAVHGESL
: . : . ::::* * : * . . * :* * : .
MAB_0925c|M.abscessus_ATCC_199 CIPEKLALATG--IAEREATDLRDAVCQLTDALQASLRKESA--------
Mvan_1524|M.vanbaalenii_PYR-1 CIPEKLFPLTG--LTPEQAIDLRADIVRLTEALIDSQEGNPHG-------
Mflv_0960|M.gilvum_PYR-GCK CIPERMLGSTG--AAAEDLAALRDALHLITEELHTRSS------------
MMAR_0145|M.marinum_M EVPAAVIARLG--VDPTELEQLHRVLTRINVAALAADAPQS---------
MUL_4952|M.ulcerans_Agy99 EVPAAVIARLG--VDPTELEQLHRVLTRINVAALAADAPQS---------
MSMEG_0538|M.smegmatis_MC2_155 AIPPKVVERLG--VDMAELEELHRVLTRVNTAALAANGVNH---------
Mb2911|M.bovis_AF2122/97 AVVRAADARVLARLTAPQQREFKRMLEKLGSD------------------
Rv2887|M.tuberculosis_H37Rv AVVRAADARVLARLTAPQQREFKRMLEKLGSD------------------
MLBr_02696|M.leprae_Br4923 ANRRAALTTMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDSPACKQ
MAV_0057|M.avium_104 ANRRAALAAMLSQLPASDLDTLMKALAPLERLASGDPTSGPAGVPPARKE
: : : :
MAB_0925c|M.abscessus_ATCC_199 -
Mvan_1524|M.vanbaalenii_PYR-1 -
Mflv_0960|M.gilvum_PYR-GCK -
MMAR_0145|M.marinum_M -
MUL_4952|M.ulcerans_Agy99 -
MSMEG_0538|M.smegmatis_MC2_155 -
Mb2911|M.bovis_AF2122/97 -
Rv2887|M.tuberculosis_H37Rv -
MLBr_02696|M.leprae_Br4923 A
MAV_0057|M.avium_104 A