For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLVLVLIGILAGLTTVLFGFGGGFVTVPVIVWADGALGAAAPAVAVATSAVVMVVNAAAATAATSRATLA HLRSAVPLVALLGCGGALGAGLARLAPPQLTTWGFVGYLVITIADVLLRPGFLRPPAVIDGPRREFAIPA GLGIPIGATASFLGVGGSVMTVPLLRRGGQPMSVATALANPLTLAISVPALAVFLTSTAAVAGEPYFAGA VDCRAAAALLAGALPLVMWLRRRPPRLPDTVHAWAYVGLLVVSAVAMLTAGAP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1110 | - | - | 100% (263) | hypothetical protein MAB_1110 |
M. abscessus ATCC 19977 | MAB_1170 | - | 1e-09 | 28.81% (236) | hypothetical protein MAB_1170 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1031c | - | 6e-06 | 28.19% (227) | hypothetical protein Mb1031c |
M. gilvum PYR-GCK | Mflv_0983 | - | 3e-10 | 28.12% (224) | hypothetical protein Mflv_0983 |
M. tuberculosis H37Rv | Rv1004c | - | 7e-06 | 28.19% (227) | hypothetical protein Rv1004c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1775 | - | 5e-05 | 32.72% (162) | hypothetical protein MAV_1775 |
M. smegmatis MC2 155 | MSMEG_5387 | - | 9e-10 | 24.56% (228) | hypothetical protein MSMEG_5387 |
M. thermoresistible (build 8) | TH_4293 | - | 1e-10 | 26.14% (264) | PUTATIVE putative protein of unknown function DUF81 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1828 | - | 7e-11 | 27.59% (203) | hypothetical protein Mvan_1828 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0983|M.gilvum_PYR-GCK -------MMALTVGLAVFVGIALGLLGG--GGSILTVPLLAYVAG----- Mvan_1828|M.vanbaalenii_PYR-1 -------MIALTIGLAVFVGIALGLLGG--GGSILTVPLLAYVAG----- TH_4293|M.thermoresistible__bu -------MIGLIIALAVLVGVALGLLGG--GGSILMVPLLAYVAG----- MSMEG_5387|M.smegmatis_MC2_155 -------MIALTIVLAVFVGIALGMLGG--GGSILTVPLLAYVAG----- Mb1031c|M.bovis_AF2122/97 MSISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSA Rv1004c|M.tuberculosis_H37Rv MSISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSA MAB_1110|M.abscessus_ATCC_1997 --------MLVLVLIGILAGLTTVLFGF--GGGFVTVPVIVWADG----- MAV_1775|M.avium_104 ------MAAYVRAQPDAVRVIAVATFAS-------SVPLALYAAT----- . . : :. :. . Mflv_0983|M.gilvum_PYR-GCK ---------------------MDAKQAIATSLLVVGVTSAIGAVS--HAR Mvan_1828|M.vanbaalenii_PYR-1 ---------------------MDAKAAIATSLLVVGVTSAIGAIS--HAR TH_4293|M.thermoresistible__bu ---------------------MDAKAAIATSLLVVGVTSAVGAVS--HAR MSMEG_5387|M.smegmatis_MC2_155 ---------------------MDAKQAVTTSLLVVGVTSAVSAVS--HAR Mb1031c|M.bovis_AF2122/97 GQQCDRLAAVLMPDTATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVP Rv1004c|M.tuberculosis_H37Rv GQQCDRLAAVLMPDTATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVP MAB_1110|M.abscessus_ATCC_1997 -------------------ALGAAAPAVAVATSAVVMVVNAAAATAATSR MAV_1775|M.avium_104 ---------------------------AAARLRRLGAGPTTAAIT----- .. : . . Mflv_0983|M.gilvum_PYR-GCK AGRVQWRTG--------LIFGAAG-------------------------- Mvan_1828|M.vanbaalenii_PYR-1 AGRVQWRTG--------LIFGAAG-------------------------- TH_4293|M.thermoresistible__bu AGQVRWRTG--------LIFGAAG-------------------------- MSMEG_5387|M.smegmatis_MC2_155 AGRVQWRAG--------LSFGAAG-------------------------- Mb1031c|M.bovis_AF2122/97 AAAAVPRVGPPAVPGLPNIPGAAGPALPPPPALPNLAAPSVPGVGIPGIG Rv1004c|M.tuberculosis_H37Rv AAAAVPRVGPPAVPGLPNIPGAAGPALPPPPALPNLAAPSVPGVGIPGIG MAB_1110|M.abscessus_ATCC_1997 ATLAHLRSAVP-------LVALLG-------------------------- MAV_1775|M.avium_104 LTGGTLAAG---------LLALAG-------------------------- . . * Mflv_0983|M.gilvum_PYR-GCK ----------------------MAGAYAGGLLAR--FIPGTVLLIGFALM Mvan_1828|M.vanbaalenii_PYR-1 ----------------------MAGAYAGGLLAR--YIPGTILLIGFAVM TH_4293|M.thermoresistible__bu ----------------------MAGAYAGGILAR--FIPGTVLLLGFAVM MSMEG_5387|M.smegmatis_MC2_155 ----------------------MAGAYAGGVLGR--FIPGTALLIAFAVV Mb1031c|M.bovis_AF2122/97 IPGIGIPGIGIPGVPDPITGVNTAAAVVNGVLGVGGTAAGVVTASAVAVT Rv1004c|M.tuberculosis_H37Rv IPGIGIPGIGIPGVPDPITGVNTAAAVVNGVLGVGGTAAGVVTASAVAVT MAB_1110|M.abscessus_ATCC_1997 -----------------------CGGALGAGLAR--LAPPQLTTWGFVGY MAV_1775|M.avium_104 --------------------------LLGWTLSR-----PAVTADTAVVA . *. . Mflv_0983|M.gilvum_PYR-GCK MIATAVAMLRGRKNVQATEGS------HRLPVPKILAEGLLVGLVTGLVG Mvan_1828|M.vanbaalenii_PYR-1 MIATAIAMLRGRKTIETGETG------HRLPVPKIVAEGLIVGLVTGLVG TH_4293|M.thermoresistible__bu MAATAVAMLRGRRNTATPDTGG----DHRLPVPRILADGLVVGLVTGLVG MSMEG_5387|M.smegmatis_MC2_155 MVAAAIPMLRGRR---APEATT----AHGLPVVRVVSLGLAVGGLTGMIG Mb1031c|M.bovis_AF2122/97 YLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAALPAVGLPALPG Rv1004c|M.tuberculosis_H37Rv YLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAALPAVGLPALPG MAB_1110|M.abscessus_ATCC_1997 LVITIADVLLRPGFLRPPAVID----GPRREFAIPAGLGIPIGATASFLG MAV_1775|M.avium_104 ALYLLVFLTGGPG--------------------HIVALGVLVAAMA-VPG . .: . . * Mflv_0983|M.gilvum_PYR-GCK AG-GGFLVVPALALLGG-LPMPVAVGTS-LIVIAMKSFAGLGGYLSSVQI Mvan_1828|M.vanbaalenii_PYR-1 AG-GGFLVVPALALLGG-LPMPIAVGTS-LIVIAMKSFAGLAGYLTSVHI TH_4293|M.thermoresistible__bu AG-GGFLVVPALALLGG-LSMPAAVGTS-LVVIAMKSFAGLAGYLTSVQI MSMEG_5387|M.smegmatis_MC2_155 AG-GGFLVVPALTLLGG-LPMPAAVGTS-LIVIALNSFSGLAGHLTGLQI Mb1031c|M.bovis_AF2122/97 VTPASLLAMAAAAGLPG-VGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAG Rv1004c|M.tuberculosis_H37Rv VTPASLLAMAAAAGLPG-VGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAG MAB_1110|M.abscessus_ATCC_1997 VG-GSVMTVPLLRRGGQPMSVATALANPLTLAISVPALAVFLTSTAAVAG MAV_1775|M.avium_104 LTRGVLPRPVARAGLAT-----AALAGSATAVLIWPALGVILPVARVAAL . . . . : : . : Mflv_0983|M.gilvum_PYR-GCK DWSLALAVTAAAVVGALLGARLTS-MVNPDSLRKAFGWFVLAMSSVILAQ Mvan_1828|M.vanbaalenii_PYR-1 NWTLALAVTAAAVIGALIGARLTA-MINPDSLRKTFGWFVLVMSSVILAQ TH_4293|M.thermoresistible__bu DWPVALAVTVAAVAGALLGSRLTA-LVNPDTLRQAFGWFVLTMSAVILAQ MSMEG_5387|M.smegmatis_MC2_155 DWALAAAVTGAAVAGCLIGTRLIT-KINADALRKAFGWFVLAMSSVILAQ Mb1031c|M.bovis_AF2122/97 MSPAELTALVAGGLPMLAAAGLPAGLAGVDPATLAAALPALAAGGLPPGL Rv1004c|M.tuberculosis_H37Rv MSPAELTALVAGGLPMLAAAGLPAGLAGVDPATLAAALPALAAGGLPPGL MAB_1110|M.abscessus_ATCC_1997 EPYFAGAVDCRAAAALLAGALPLVMWLRRRPPRLPDTVHAWAYVGLLVVS MAV_1775|M.avium_104 AWLLAAGIALRDKG------------YGDRGGRAQEGAST---------- . Mflv_0983|M.gilvum_PYR-GCK EIHLAVGIAGAALTAIAALMTFACSRYAHCPLRRITGIGAARGAHA---- Mvan_1828|M.vanbaalenii_PYR-1 EIHPAVGITAAALTLIAAATTLACQRYAHCPLSRLTTRLTTPKAAA---- TH_4293|M.thermoresistible__bu EAHPAVGAAAAVLTAVAAALTFTCSRYGRCPLRRVAEALSSRPATA---- MSMEG_5387|M.smegmatis_MC2_155 EIHPFVGLAAASLTVIAASMTMVCARFSRCPLRRVTRLSMARPAVA---- Mb1031c|M.bovis_AF2122/97 PALPGVDPAALAAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPL Rv1004c|M.tuberculosis_H37Rv PALPGVDPAALAAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPL MAB_1110|M.abscessus_ATCC_1997 AVAMLTAGAP---------------------------------------- MAV_1775|M.avium_104 -------------------------------------------------- Mflv_0983|M.gilvum_PYR-GCK -------------------- Mvan_1828|M.vanbaalenii_PYR-1 -------------------- TH_4293|M.thermoresistible__bu -------------------- MSMEG_5387|M.smegmatis_MC2_155 -------------------- Mb1031c|M.bovis_AF2122/97 PALPSRLCTPGFGPIGVCIP Rv1004c|M.tuberculosis_H37Rv PALPSRLCTPGFGPIGVCIP MAB_1110|M.abscessus_ATCC_1997 -------------------- MAV_1775|M.avium_104 --------------------