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M. abscessus ATCC 19977 MAB_1080 (-)

annotation: porin precursor
coordinates: 1094346 - 1095017
length: 223

MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDGKGRLLRIQQWDTFLNGVFPLDR
NRLTREWFHSGRAVYEVTGAGSDTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSILYGIPNAFGGSPEA
SYVQTTNLLPSAGINVDLGNGPGIQEVATFSVAVAGPKGAVAVSNAHGTVTGAAGGVLLRPYARLISSAG
DSVTTYGETWDMK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_1080--100% (223)porin precursor
M. abscessus ATCC 19977MAB_1081-e-11091.87% (209) porin precursor
M. abscessus ATCC 19977MAB_2800-6e-0831.68% (161) hypothetical protein MAB_2800

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_1891-3e-7968.60% (207) hypothetical protein Mflv_1891
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. marinum M-----
M. avium 104MAV_3943-5e-0528.85% (156) hypothetical protein MAV_3943
M. smegmatis MC2 155MSMEG_5483-3e-7867.79% (208) porin
M. thermoresistible (build 8)TH_1730-2e-7871.21% (198) MspD protein
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_4839-2e-7970.10% (204) hypothetical protein Mvan_4839

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_5483|M.smegmatis_MC2_155      MKAISRV------LIAMISALAAAVAGLFVSAGTSHAGLDNELSLVDG--
TH_1730|M.thermoresistible__bu      --------------------MATAVAALVVSPGTAHAGLDNELSLVDG--
Mflv_1891|M.gilvum_PYR-GCK          MKAITRV------LIA----MVASIAALFVSTGTSHAGLDNELSVVDG--
Mvan_4839|M.vanbaalenii_PYR-1       MKVISRV------LIA----MVASIAALFASTGTSHAGLDNELSLVDG--
MAB_1080|M.abscessus_ATCC_1997      MKLLGKVSGWARRGVLAVGALLMTLVALIATTATAHAGLDDELTLVDG--
MAV_3943|M.avium_104                -MVVRRALVAAVCLALSLPTAPTTGADPDAAPPPPEAAPAAEGALPSNPP
                                                           : .   .:. ...*.   * :: ..  

MSMEG_5483|M.smegmatis_MC2_155      ------QDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYIVAGPGA
TH_1730|M.thermoresistible__bu      ------QDRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGRAKYRVEGPGA
Mflv_1891|M.gilvum_PYR-GCK          ------QGRTLTVQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGA
Mvan_4839|M.vanbaalenii_PYR-1       ------QGRTLTIQQWDTFLNGVFPLDRNRLTREWFHSGKATYIVAGEGA
MAB_1080|M.abscessus_ATCC_1997      ------KGRLLRIQQWDTFLNGVFPLDRNRLTREWFHSGRAVYEVTGAGS
MAV_3943|M.avium_104                AILKTPDGWTLGLGARDEQQVPVAPLTTALSSREYLASG--IFVGSLSGP
                                          ..  * :   *     * **     :**:: **   :     *.

MSMEG_5483|M.smegmatis_MC2_155      DEFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDDGDIT----GPPFG-
TH_1730|M.thermoresistible__bu      EDFEGTLELGYQIGFPWSLGVGINFSYTTPNILIDGGDIT----GPPFG-
Mflv_1891|M.gilvum_PYR-GCK          DDFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGYGLDLATPDDPFLG
Mvan_4839|M.vanbaalenii_PYR-1       DDFEGTLELGYQVGFPWSLGVGINFSYTTPNIAFDGWGLD----DN----
MAB_1080|M.abscessus_ATCC_1997      DTFEGTLELGYQVGYPWSLGVGLNFNYTTPNTSIL-YGIPNAFGGSPE--
MAV_3943|M.avium_104                TQPQGVLEVGYEIG------CGIDMSTSDGVTIGGTAGITPGVTGPVTG-
                                       :*.**:**::*       *:::. :         .:     .     

MSMEG_5483|M.smegmatis_MC2_155      -LESVITPNLFPGVSISADLGNGPG-IQEVATFSVDVSGPAGGVAVSNAH
TH_1730|M.thermoresistible__bu      -LDSVITPNLFPGVSISADLGNGPG-IQEVATFSVDVAGPSGKVAVSNAH
Mflv_1891|M.gilvum_PYR-GCK          LADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVVVSNAH
Mvan_4839|M.vanbaalenii_PYR-1       LADSIVTPPLFPGVSISADLGNGPG-IQEVATFSVDVAGPGGSVAVSNAH
MAB_1080|M.abscessus_ATCC_1997      -ASYVQTTNLLPSAGINVDLGNGPG-IQEVATFSVAVAGPKGAVAVSNAH
MAV_3943|M.avium_104                -VPGDVLPLVVAPIAGVLNVGLKPGLVIVVPVVKKQFRGPNPWVMVSNFH
                                           . :..  .   ::*  ** :  *....  . **   * *** *

MSMEG_5483|M.smegmatis_MC2_155      GTVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
TH_1730|M.thermoresistible__bu      GTVTGAAGGVLLRPFARL--IASTGDSVTTYGEPWNMN
Mflv_1891|M.gilvum_PYR-GCK          GTVTGAAGGVLLRPFARL--ISSTGDSVSTYGEPWNMN
Mvan_4839|M.vanbaalenii_PYR-1       GTVTGAAGGVLLRPFARL--ISSTGDSVTTYGAPWNMN
MAB_1080|M.abscessus_ATCC_1997      GTVTGAAGGVLLRPYARL--ISSAGDSVTTYGETWDMK
MAV_3943|M.avium_104                VKIDGCVGQSFIRSYAVLNRVTDESDVVLSYVGVTKAV
                                     .: *..*  ::*.:* *  ::. .* * :*    .