For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MASLVRALRRERGLTLEELGSRTGLTKSYLSKVEREHSTPSVSVAMRIAGALDVDVSRLFTNDAYESRVV VDRGADEWDDGKFHALSTEMLGKIMTPFLASPSTEFAEHKSSHEGQEFVFVHRGSIELQCGQDDEVVSYE LDEGDSAYLDATRTHRIRRTSETPALVVIVAAT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1049 | - | - | 100% (173) | putative transcription regulator protein |
M. abscessus ATCC 19977 | MAB_3176c | - | 1e-06 | 23.73% (177) | hypothetical protein MAB_3176c |
M. abscessus ATCC 19977 | MAB_4363c | - | 2e-06 | 37.04% (81) | putative DNA-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0484 | - | 6e-05 | 35.00% (60) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_1295 | - | 2e-09 | 26.40% (178) | XRE family transcriptional regulator |
M. tuberculosis H37Rv | Rv0474 | - | 7e-05 | 35.00% (60) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_2152 | - | 1e-38 | 48.02% (177) | transcriptional regulator |
M. avium 104 | MAV_3453 | - | 8e-39 | 46.51% (172) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_1151 | - | 2e-10 | 25.54% (184) | DNA-binding protein |
M. thermoresistible (build 8) | TH_0145 | - | 3e-06 | 27.78% (144) | regulatory protein |
M. ulcerans Agy99 | MUL_1737 | - | 2e-38 | 47.46% (177) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0450 | - | 2e-38 | 47.09% (172) | XRE family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2152|M.marinum_M --------------------------------------MTALLRAVRRQR MUL_1737|M.ulcerans_Agy99 --------------------------------------MTALLRAVRRQR MAV_3453|M.avium_104 --------------------------------------MTALLRPVRRQR Mvan_0450|M.vanbaalenii_PYR-1 --------------------------------------MSGLLRAVRQER MAB_1049|M.abscessus_ATCC_1997 --------------------------------------MASLVRALRRER Mb0484|M.bovis_AF2122/97 -----------------MSSEEKLAAKVSTKASDVASDIGSFIRSQRETA Rv0474|M.tuberculosis_H37Rv -----------------MSSEEKLAAKVSTKASDVASDIGSFIRSQRETA Mflv_1295|M.gilvum_PYR-GCK MANQNDRDDHTPLLRNTSGTARDRDPGAPVEELEIESAIGRNVRLLRQQQ MSMEG_1151|M.smegmatis_MC2_155 -------------------MGKAKPNDNKALVDAMLGDLGSRIRMLRKER TH_0145|M.thermoresistible__bu -------------------------MEANQREGRIEDRIRQRLRELRKQR : :* *. MMAR_2152|M.marinum_M GLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSD MUL_1737|M.ulcerans_Agy99 GLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSD MAV_3453|M.avium_104 GLTLEALAAQTGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSD Mvan_0450|M.vanbaalenii_PYR-1 GMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSD MAB_1049|M.abscessus_ATCC_1997 GLTLEELGSRTGLTKSYLSKVEREHSTPSVSVAMRIAGALDVDVSRLFTN Mb0484|M.bovis_AF2122/97 HVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVR Rv0474|M.tuberculosis_H37Rv HVSMRQLAERSGVSNPYLSQVERGLRKPSADVLSQIAKALRVSAEVLYVR Mflv_1295|M.gilvum_PYR-GCK GLTVAETAARVGISKAMMSKIENAQTSCSLSTLALLAKGFDVPVTSLFRG MSMEG_1151|M.smegmatis_MC2_155 QLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQLLEA TH_0145|M.thermoresistible__bu GLTLEDVATRAQIDVSTLSRLESGKRRLAIDHLPRLAAALSVSTDDLLRA :: . : :*::* : :: .: : * MMAR_2152|M.marinum_M ESAHETITVDRAHD------RLGPQSGRYHVLASTQLGKTMSPFVVRPTA MUL_1737|M.ulcerans_Agy99 ESAHETITADRAHD------RLGPQSGRYHVLASTQLGKTMSPFVVRPTA MAV_3453|M.avium_104 EAAREKIAVERAG---------GPGGRRYRVLASSMLGKTMSPFVIRPT- Mvan_0450|M.vanbaalenii_PYR-1 DPEVSTISVDRAAE------R---GADRHHAVAARMLGKEMSPFVVRPG- MAB_1049|M.abscessus_ATCC_1997 DAYESRVVVDRGAD------EWD--DGKFHALSTEMLGKIMTPFLASPS- Mb0484|M.bovis_AF2122/97 AG------------------------------------------ILEPS- Rv0474|M.tuberculosis_H37Rv AG------------------------------------------ILEPS- Mflv_1295|M.gilvum_PYR-GCK ADVERPAAFVKAGTGAR-IVREGTREGHEYQLLGSLRGEHKRLECLEVTL MSMEG_1151|M.smegmatis_MC2_155 PESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDLNGALEATWVVTPP- TH_0145|M.thermoresistible__bu PDTEDPRVRGSAHT---------SHGVTYWPLTRQGPAGGLHAFKIRISA MMAR_2152|M.marinum_M GQDCASDGPHPEHTGQEFVFVHTGSVELDYG--DQTIT--LGTGDSAYFD MUL_1737|M.ulcerans_Agy99 GQDCASDGPHPEHTGQEFVFVHTGSVELDYG--DQTIT--LGTGDSAYFD MAV_3453|M.avium_104 --EQLADDPHPEHAGQEFLFVHAGRVELDYG--DQTFT--LGPGDSAYFD Mvan_0450|M.vanbaalenii_PYR-1 --RTFTTHPHPTHLGQEFIFVHSGRVELSHD--GRIIA--LEAGDCAYFD MAB_1049|M.abscessus_ATCC_1997 --TEFAEH-KSSHEGQEFVFVHRGSIELQCGQDDEVVSYELDEGDSAYLD Mb0484|M.bovis_AF2122/97 ----------ETSQVRDAIITDTAITERQKQ---ILLD----------IY Rv0474|M.tuberculosis_H37Rv ----------ETSQVRDAIITDTAITERQKQ---ILLD----------IY Mflv_1295|M.gilvum_PYR-GCK S-EKSQTYPLFQHPGTEFIYMLEGVMDYSHS--RSVYR--LQPGDSLQID MSMEG_1151|M.smegmatis_MC2_155 --GYDTSATPYHHHGEEFGIVLSGTKDVYLDG----IRHRLHAGDSIRYA TH_0145|M.thermoresistible__bu R-RRTPPAGLPVHEGHDWVYVLSGHMRLILDSRDFVIK----PGEAVEFS : . MMAR_2152|M.marinum_M ASVGHKLRAVGTERAEVVVVAG--AELGGR---- MUL_1737|M.ulcerans_Agy99 ASVGHKLRAVGTERAEVVVVAG--AELGGR---- MAV_3453|M.avium_104 ASVSHKVRSVGPEPAEVVAVAH--AEPGSAAFAG Mvan_0450|M.vanbaalenii_PYR-1 ASAPHKLRQIGEDAAEVVVVAGNAPRPGAPRRRG MAB_1049|M.abscessus_ATCC_1997 ATRTHRIRRTSETPALVVIVAAT----------- Mb0484|M.bovis_AF2122/97 ASFTHQNEATREECPSDPTPTDD----------- Rv0474|M.tuberculosis_H37Rv ASFTHQNEATREECPSDPTPTDD----------- Mflv_1295|M.gilvum_PYR-GCK GEGAHGPVDLVEVPIRFLSVIAFPDSQV------ MSMEG_1151|M.smegmatis_MC2_155 SNIPHWYVNPSETEECTAIWVSTPPTW------- TH_0145|M.thermoresistible__bu TWTPHWFGAVDGPVEAIMILGPHGERLHLHE--- *