For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MFAKTGSLIAGMVVLSVAGCSSTEPSGTGATTVRTSVASGPVDFAKIPGQIPAEAEMTQQGSEEAPIGAC VYLKGKPGSVTLNKVDCDSQDANYRVIQRVGFPDQCVNDADRRFYLGSPQGEWTACMDYAWTSEGCISVA PDKVVRAECDDKNLPNRERPITILFNTIDTSRCLFGGFAHPVRRFTVCTETQK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0778 | - | - | 100% (193) | hypothetical protein MAB_0778 |
M. abscessus ATCC 19977 | MAB_2981c | - | 2e-37 | 39.04% (187) | putative liporotein LppU |
M. abscessus ATCC 19977 | MAB_3107c | - | 1e-13 | 31.62% (136) | lipoprotein LppU |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2807c | lppU | 3e-13 | 32.86% (140) | lipoprotein LppU |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2784c | lppU | 4e-13 | 32.86% (140) | lipoprotein LppU |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_1923 | lppU | 2e-11 | 30.88% (136) | lipoprotein LppU |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2655 | - | 3e-15 | 33.33% (129) | LppU protein |
M. thermoresistible (build 8) | TH_1282 | lppU | 9e-14 | 29.63% (135) | PROBABLE LIPOPROTEIN LPPU |
M. ulcerans Agy99 | MUL_2148 | lppU | 1e-11 | 30.88% (136) | lipoprotein LppU |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2655|M.smegmatis_MC2_155 -------------------------------------------------- TH_1282|M.thermoresistible__bu -------------------------------MRTPPRDSPVAAGSAILAI Mb2807c|M.bovis_AF2122/97 -------------------------------MR--AWLAAATTALFVVAT Rv2784c|M.tuberculosis_H37Rv -------------------------------MR--AWLAAATTALFVVAT MMAR_1923|M.marinum_M -------------------------------MR--ALFLAVLMALAVPAS MUL_2148|M.ulcerans_Agy99 -------------------------------MR--ALFLAVLMALAVPAS MAB_0778|M.abscessus_ATCC_1997 MFAKTGSLIAGMVVLSVAGCSSTEPSGTGATTVRTSVASGPVDFAKIPGQ MSMEG_2655|M.smegmatis_MC2_155 --------------MQAGDCLELGGTFDQPEATRAECGSKKSNYKVVQTV TH_1282|M.thermoresistible__bu VAVVGAVSGCASADLQVGDCLRMGGPPDNPDAAEVPCGTPESTHKIAAIV Mb2807c|M.bovis_AF2122/97 ----GCSSATNVAELKVGDCVKLAGTPDRPQATKAECGSPASNFKVVAVV Rv2784c|M.tuberculosis_H37Rv ----GCSSATNVAELKVGDCVKLAGTPDRPQATKAECGSPASNFKVVAVV MMAR_1923|M.marinum_M GVLVGCSSTTKAADLAVGDCLKLAGPPDRPQATKAACGSEDSNFKVVAVA MUL_2148|M.ulcerans_Agy99 GVLVGCSSTTKAADLAVGDCLKLAGPPDRPQATKAACGSEDSNFKVVAVA MAB_0778|M.abscessus_ATCC_1997 IPAEAEMTQQGSEEAPIGACVYLKGKPGSVTLNKVDCDSQDANYRVIQRV * *: : * . .. *.: :..:: . MSMEG_2655|M.smegmatis_MC2_155 AD---SARCPADVDSYYTLSSRFGGETHTVCMDIDWVVGGCMNVDPENNT TH_1282|M.thermoresistible__bu QD---EAECPADVDSYYSMRSTFDDATTTVCLDIDWVVGGCMSIDPTDEA Mb2807c|M.bovis_AF2122/97 QE--DHAECPADVDSTYSMRNAFNGSTNTICLDIDWVIGGCMSVDPTHNT Rv2784c|M.tuberculosis_H37Rv QE--DHAECPADVDSTYSMRNAFNGSTNTICLDIDWVIGGCMSVDPTHNT MMAR_1923|M.marinum_M KDGTDHTECPADVDSSYSSRNVLGGANSTLCLDVDWVLGSCMSVDPDHKT MUL_2148|M.ulcerans_Agy99 KDGTDHTECPADVDSSYSSRNVLGGANSTLCLDVDWVLGSCMSVDPDHKT MAB_0778|M.abscessus_ATCC_1997 GFP---DQCVNDADRRFYLGSPQG--EWTACMDYAWTSEGCISVAP---D .* *.* : . . * *:* *. .*:.: * MSMEG_2655|M.smegmatis_MC2_155 DPYRVDCSDAGAPHRQRVTEVLEGISN---PDQCATGLGYAYDERQFTVC TH_1282|M.thermoresistible__bu DPVRADCADPAAPHLQRVTEILDDVAD---VDQCVSGTGYAYEDRQFTVC Mb2807c|M.bovis_AF2122/97 DPFRVDCDDASVPHRQRATQILKDLDSPVSVDQCASGVGYVYTQRRFAVC Rv2784c|M.tuberculosis_H37Rv DPFRVDCDDASVPHRQRATQILKDLDSPVSVDQCASGVGYVYTQRRFAVC MMAR_1923|M.marinum_M DPFRVGCNDASAPHRQRATQILQDVASPVTVDQCASGVGYTYTERRFVVC MUL_2148|M.ulcerans_Agy99 DPFRVGCNDASAPHRQRATQILQDVASPVTVDQCASGVGYTYTERRFVVC MAB_0778|M.abscessus_ATCC_1997 KVVRAECDDKNLPNRERPITILFNTID---TSRCLFG-GFAHPVRRFTVC . *. * * *: :* :* . . .:* * *:.: *:*.** MSMEG_2655|M.smegmatis_MC2_155 VENVR----- TH_1282|M.thermoresistible__bu VEHVEV---- Mb2807c|M.bovis_AF2122/97 VEDVTGGPRS Rv2784c|M.tuberculosis_H37Rv VEDVTGGPRS MMAR_1923|M.marinum_M VEDVGGSSQT MUL_2148|M.ulcerans_Agy99 VEDVGGSSQT MAB_0778|M.abscessus_ATCC_1997 TETQK----- .*